Takifugu flavidus (sansaifugu): 130514537
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Entry
130514537 CDS
T09160
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130514537 (rbfox1)
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130514537 (rbfox1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
130514537
NCBI-ProteinID:
XP_056870158
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All DBs
Position
18:complement(912438..1114634)
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AA seq
408 aa
AA seq
DB search
MQHPGGTCVALPNVDACPQLSCAALTFMYLQQGNQDTPAPPDPSMAQAYPSAQFAHPPQN
SIPAEFTASHPHPHPHSHPHPHPATAQDYSGIQASVSEHPLTMYQTSQSHTEQSASDSGS
QTVTGTATQTDDAAQTDSQPPSQTVPESTDSKTQPKRLHVSNIPFRFRDPDLRQMFGQFG
KILDVEIIFNERGSKGFGFVTFEHSMDADRAREKLHGTVVEGRKIEVNNATARVMTNKKT
VNPYANGWKLNPVVSAVYSPEFYAVPGFPYPAASAAAYRGAHLRGRGRTVFNTFRAAAPP
PHIPAYGGVVYQDGFYGADIYGGYATYRYAQPAAATAAAYSDSYGRVYAADPYNHTLTPA
ATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcccggaggaacatgtgtggcgttacccaacgtggacgcctgtcctcaactg
tcctgtgctgctctcaccttcatgtatttacagcagggtaaccaggacacaccggcaccc
ccggatccatccatggcccaggcttatccatcagcccaatttgcgcaccctccccagaac
agcatccctgctgagttcacagcttcacacccccatccgcatccacactcccacccacat
ccacaccctgcaacggcacaagactacagcggcatccaggcctctgtcagcgagcatccg
ctcaccatgtaccagacctcacagagccacaccgagcagagcgcgtcagactctggcagc
caaacggtcaccggcacagccacacagacagatgacgctgctcagacagacagtcagcca
ccatcacagactgtacctgaaagcacagacagtaagacccaacccaagagacttcacgtc
tccaatatccccttcagatttcgagatcccgatctcagacaaatgtttggtcaatttggc
aaaatcctggatgtggaaatcatcttcaacgagcgtggttctaagggttttgggttcgta
acgtttgaacacagcatggatgcggacagggccagagaaaaattacatggcaccgtggta
gaaggccgcaagatcgaggtcaataatgcaactgcccgagtaatgacaaacaagaaaact
gtcaacccatatgcaaatggctggaagttaaatccagtggtcagtgccgtctacagccca
gaattctatgcagtaccaggttttccctacccagcagccagcgcagcagcatacagagga
gcccacctacgaggtcggggacgaactgtgttcaacacattcagggcagctgcgccacct
ccccacattccagcttacggcggtgttgtttaccaggatggattttatggtgcagatatt
tatggtggttatgctacctacagatatgcccaacctgctgctgccacagctgctgcatac
agtgacagttacggacgagtatatgctgccgacccctacaaccacacactcactccagca
gccacatacagcgttggtgccatgaatgcattcgccccactgacagatgccaaaactcgg
agccacgctgatgacgtggggctagtgctgtcgtctctccaagctagtatataccgggga
ggctacagccgcttcgcaccctattaa
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