Takifugu flavidus (sansaifugu): 130518390
Help
Entry
130518390 CDS
T09160
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03022
Basal transcription factors
tfs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130518390 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
130518390 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfs03021
]
130518390 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
tfs03400
]
130518390 (gtf2h4)
Transcription machinery [BR:
tfs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130518390 (gtf2h4)
DNA repair and recombination proteins [BR:
tfs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130518390 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
130518390
NCBI-ProteinID:
XP_056876926
LinkDB
All DBs
Position
21:complement(10589312..10596031)
Genome browser
AA seq
465 aa
AA seq
DB search
MKLHVQLQCKNLHQYLKELSPDILDRLYNHPATCLAVYRELPSLAKNFVMRMLFLDQPLP
QAAVSLWVNKDNQKDHDECVSVLAGLRLWHSQHLQGGLQGYILNPVFKDNLKIALLGGGR
AWADEGGTLGPDRHARDIGSLDRYATERWEVILHFMVGSPCAAVSQDLAQLLVHAGLMKS
EAGEPPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSDSLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLATGDSSSSLHTPTASLAS
TPGSGDSGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIAN
GITAQQIIHFLRTRAHPVMLRQTPFLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQTD
FEVLRDRAKSLGCLVWQDAAHRVMVVTLWGHSEVKKFWKRQKSQM
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcatgttcaactgcagtgcaagaatctgcatcaatacctcaaagagttgagt
cctgacattttggacagactctacaaccatccagcaacatgtctggctgtttacagagaa
ctgccgtctctggcaaagaactttgtgatgcgaatgctgttcctcgaccagccgctcccc
caggcagccgtgtcattatgggtcaacaaagacaatcagaaggatcatgatgaatgtgtg
tcggtgctggcaggacttcgcctctggcacagtcagcatctgcaaggaggtctacaagga
tacattttgaatccagtctttaaagataacctaaagattgccttgcttggagggggcaga
gcatgggccgacgaaggaggcactctgggtccagatcgccacgcccgggacatcggcagc
ctggaccgttacgccacagagcgctgggaggtcatcctgcatttcatggtgggttcaccc
tgcgctgccgtcagtcaagacctggcgcagctgctggttcacgcaggcctcatgaaaagt
gaagccggggagccaccttacatcacctcagctggtttccagttcctcctgttggacacg
gcctctcagctctggtacttcaccctccagtacctgaaaactgctcagtctagaggaatg
gatctagtggagatcctgtcattcctgttccagcttagtttctctactcttgggagagat
tattcagtggagggcatgagcgactcattgctgaccttcctgcagcacttacgggagttt
ggacttgtctttcagagaaagaggaagtctcggcgctactatcccaccagactggccatc
acactagccacaggcgactccagcagctccctgcacacccccacagccagcttggcctca
actcctggttctggtgactctggcttcatcgtggtagaaacaaactaccgcatctacgct
tacaccaattcagaacttcagattgctttggttgctttgttcagtgaaatgttgtatcgc
ttcccaaatgtggtggttgcccaggtgaccagggagtcagtacaacaggccatagccaac
ggtatcactgctcagcagattatccacttcctgaggacgagggctcatcctgtcatgctc
agacagactccgtttcttcctccaacaataactgatcaaatcagactgtgggagctggag
cgagatcggctgcagttcacagaaggagtgctctataaccagttcctgtcccaaacagac
tttgaggtgctgagagacagagccaagagcttgggctgtctggtgtggcaggacgcggct
cacagggtcatggtggtgacgctgtggggacacagcgaagtcaagaaattctggaaacga
caaaagtcccaaatgtaa
DBGET
integrated database retrieval system
