Takifugu flavidus (sansaifugu): 130520684
Help
Entry
130520684 CDS
T09160
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfs01002
]
130520684 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130520684 (usp47)
Enzymes [BR:
tfs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130520684 (usp47)
Peptidases and inhibitors [BR:
tfs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130520684 (usp47)
Ubiquitin system [BR:
tfs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130520684 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
130520684
NCBI-ProteinID:
XP_056880381
LinkDB
All DBs
Position
2:complement(17164019..17176339)
Genome browser
AA seq
1370 aa
AA seq
DB search
MEMVPSEETQFVPKEIHNAAEEPRALCIIQDTTNARTVTERLTLNLPASTPLSKLHEDVA
HKAGYVTGTFELTWGNAPNTAPLDHRSEMSLSDSGFEPGGKRNFLHITDKDGEQPQLASD
ESGAADSSGLDDSSQERFIGPLPREGSVGCSGDYSSPSYSYSSILTKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTVQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCQKKCDARK
GLRFLHFPYLLTLQLKRFDFDYNTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTNNADRMLKPKSLPTFELFSVMVHSGS
AAGGHYYAHIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLSVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAYKLMELEGLVTLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVVDLESETIAASVSVRAYLN
QTVTEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSIS
SDHQVTFSDSLLWKLLDRHGNTIRLLVLLPEQSPGTSTNRTVCQKVGVDSDPSLDGSKGN
RKSVEAILEESTEKLKNLSLQQQQQQQQQQGSSTSTSDSQKSSDASDFEHIESPTQDADS
NSLLGEAADNRELENRIRMAGSSGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSS
HSSDTLCNADSGPLALANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKS
KGEAQYLYFRTEPCSQSDSTCDAQKCLVVYVDKRITLAAFKQNLEPYVGVPSAQFKVFRV
YANNQEFESIRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEAEPCKFLVDTV
FAKGMTVRQSKEELLPLLKEQCKLDLNIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSN
WEVFLEVLNESEKMKSMSQLAVLTRRWSPSTMKLGPFQEVILENSSVDELKEKLSEMSDI
TLENLDFAKGRGTFPCDISVLEIQQDLDWNPKVSTLNVWPLYICDDGAVVFYRNSTEEPM
ELSEDERSELMKRESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgcctagcgaggagacccagttcgtacctaaagagatccacaacgctgcc
gaggagcctcgtgcgctgtgcataattcaggacaccaccaacgcgaggacggtcaccgag
cggctcaccctgaacctgcccgcctccacccccctgtccaagctccacgaagatgtggcc
cacaaagccggatacgtcacgggcacctttgagctgacctggggaaacgcacctaacacg
gcgccgctggaccaccggagtgagatgtccctctccgattctgggttcgagcccggtggc
aaaagaaactttctccacattactgacaaagatggagaacagccccagcttgcatctgat
gaatcgggagctgctgatagcagcgggctggatgacagctcccaggagcgcttcatcggg
cccctcccccgagaaggctccgtaggctgcagtggtgattacagcagtccatcctactct
tactcgtctattctcaccaaatctgatacaggttacgtcggtctggtcaaccaggctatg
acctgttatctcaacagccttctgcagactctgttcatgactccagaattcagaaacgca
ctctacaactgggagtttgaagagtctgaggaggatccagtcaccagcatcccttaccag
ctgcaaaggttgtttgttctcctgcagaccagtaagaaacgggcaatcgagaccaccgac
gtaacgcggagttttggctgggacagtagtgaggcttggcagcagcacgatgtccaggag
ctgtgtagggtcatgtttgatgccctggagcaaaagtggaagcagacagtgcaggctgac
ctgatcaaccagctgtaccaggggaagttaaaagattacgtgcgctgtctggagtgtggc
tacgagagctggaggatcgatacttacctggacatccctctggttatcagacccttcgga
gccagccaggcttacggcagtgtggaagaggctttgcaggcatttatccaaccagaaact
ctggatggacccaaccagtacttctgcgagcgttgccaaaagaaatgcgatgctcgaaaa
gggctgagattcctgcactttccctacctgctgacgctccagctgaagcgctttgatttc
gactacaacactatgcatcgcatcaagctcaacgaccgcatgaccttccccgaggagctc
gacatgagccccttcatcgatgtggaagatgagaagtcgcctcagacggagagctgcact
gatagtggggccgagaacgaaggcagttgccacagtgaccagatgagcaacgatttttct
acggatgattgtgtggatgaaggcatctgtttggacagcaccaacaatgcagacagaatg
ctgaagccaaagagtttgccgacatttgagctgttctctgttatggtccattctgggagc
gctgctggtggacattactatgcccacatcaaatccttcagtgatggccagtggtacagt
ttcaacgatcaacacgttagcaagatcactcaagacgatatcaggaagacatatgggggg
tcctcagggagcagaggttattactctagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagacccctcaaggaacgcaaagtatttatctgtggaagacttc
ccagagcacataaagagtttggttcaaaaggagaaggagtcggaggagcaggagaagcga
cagagagagatcgaaagaaacacttgcaaaataaagctgttctgcatgcaccctgtaaag
atgatgatggagagtaagctggaagtgcataaggacaaaaccctcagagaagcaacagag
atggcctacaagctgatggaactagaggggttggtcacgctggactgttgtcgtttggtg
aagtatgatgagttccacgagtatctggagcgctcatatgaaggcgaggaggacacacca
atgggtcttctcctgggaggagtcaagtcttcgtacatgttcgatttgcttcttgagacc
cgcaggcctgaccaggtgtttcaaccttacaaacctggagaagtgatggtgaaggttcac
gttgtggacttggagagcgagaccatcgccgcttcagtcagcgtcagagcttatctgaac
cagaccgtcacagaattcaagcagcttattgcacaggctacaggtttatctgcagaaacc
atgcgtgtggtcctggagcgctgttataatgaccttcgccttttgtatgttccaaataag
actctgaaagctgagggcttcttcagaagcaacaaggtttttgtagagagctcaatctca
tcggatcatcaggtcactttctctgactctttattgtggaagctgttggatcgtcatgga
aatacaatccggcttttggtcttgctgcctgaacagtctccaggcacatcgaccaacaga
actgtttgccaaaaagtaggtgttgattctgatccatccttggacgggtcaaagggaaac
aggaaatcagtagaggctatcctggaagagagtacagaaaaactgaagaacctgtctctc
cagcagcagcagcagcagcagcagcagcagggctccagcaccagcaccagcgacagccag
aaaagctcagatgccagtgactttgaacacattgaatctcccacccaagacgcagattcc
aactctttactcggcgaggctgcagacaacagagagctggagaatcggatcaggatggcc
ggcagcagcggcgcctcctccgaccctgagaaccactttgcctgtgaagagcggtcggac
tctgaggtcaacaatgaccgcagcacgagctcggtggacagcgacatcttgagctccagt
cacagcagcgacacactgtgtaacgccgacagcgggcccttggcattggccaatggcctg
gactcgcacagcatcacaagtagccgtcgctccaaagcccacgagggcaaaaaggagaca
tgggacactgctgaagaggactctgggacagacagtgaatacgatgacaatgggaagagc
aaaggagaggctcagtacctgtattttagaactgagccttgttcacagagtgactccacg
tgcgacgcacaaaaatgtttagtggtttatgtggacaaaaggatcacattagcagcattt
aaacagaacctggagccttacgtgggggtcccctccgctcagttcaaagtgtttcgggtt
tacgccaacaaccaggagttcgagagcatccgactcaatgaaacactctcatcgttctct
gacgacaacaagataacgatccgcctcggaagagctctgaaaaagggtgaatacagagtg
aaggtgtaccagctactcgtgaacgaagcagagccctgcaagttcctcgtggatacggtg
tttgccaaaggcatgactgtcaggcagtccaaggaggagctgctcccgctgctgaaagaa
cagtgcaaactggacctcaacattgacagggtccgtctcagaaagaagacgtggaaaaac
ccaggcacggtgtttctggactatcacgtttatgaagaagacatcagcatctcctccaac
tgggaggttttcttggaagttctcaatgaatcagagaagatgaagtctatgtcacaactc
gctgttctgacccggagatggagcccttctacgatgaagctggggccttttcaggaggtg
atattggagaacagcagcgtagacgaactgaaggaaaagctcagtgaaatgagtgacatc
actcttgaaaacctggactttgcaaagggcagaggaacttttccttgtgacatctctgtg
ctggagatccagcaggatttggactggaacccaaaggtctctactctgaacgtgtggcct
ctgtacatctgtgatgacggcgctgtggtcttctacaggaacagcacagaggagcccatg
gagctgtcggaggatgagcgcagcgagctaatgaagagggagagcagccggctactgaag
actggccaccgtgtcagttattcaccgcgcaaagagaaggccctcaagatctacctggac
ggaggcccggccaaggacccgggacaggactga
DBGET
integrated database retrieval system
