Takifugu flavidus (sansaifugu): 130527137
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Entry
130527137 CDS
T09160
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130527137
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Others
Others
130527137
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Psg1
TNFR_16_TM
Motif
Other DBs
NCBI-GeneID:
130527137
NCBI-ProteinID:
XP_056891309
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All DBs
Position
6:10658267..10727602
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AA seq
1220 aa
AA seq
DB search
MERGIQFSPKWQSLLLALLLVALWFSRSSKSEITCRSCQPGNKRRPQELLLKFDAGIKGE
VFGAVKGATSAESQRRRCAEGSTECVQQRAVSVMERNTRHLLPSGDPGESFRSKTKVSPV
SGQQEVTEASVSDTELRKRLRRNADTKSEGRLSARTQTLSASAAPRRVTRWSGEERKAAA
ARQDEPKLNSSTFALTGDSSHNQAMVLWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTD
YGGKYQKLNDKIGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATFQKYRLNF
YILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHEKVAPNRFYWSKLGLDKEPGLI
HLETSVSEGQALYITCKLQNCTDANKAKPFPGYIDPNSLVVQDEYVFVQVSTAGKPIYYV
SAKRDVFTPLKLPKYTLPKDLHVISTDENRVVAAVQEWNQNETYNLYVSDTLGVYYTLAL
ENVVSSIGPEGNVMVDLYEVAGIKGMFLANRKLENQVKTYITYNRGRDWRLLLAPSQDLK
GNSIHCVLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGCTGSGLSSSNVTVFITS
DAGNTWRQIFNEEYAVLYLDQGGALVAIRHTPLPIRHLWLSFDEGHFWNKYSFTNTPLFV
DGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLM
GVKRIYQKLKPTSRCVMGKTHSVSMMSSSCECTEADFECDYGFERQSNGKCAPAFWFHAS
SVSRRCTAGMMFLNTTGYRKVVSNNCSAGVSMEYTAKRQQCQVQAPKGLHLVTSEGTLTA
TLGSNVTFLVFLEEGDSARTSITLDFGDGRALTYSNVSAIEDGIKHIYRDVGIYRVAAIG
ENYFGSETATLYLHVTSQLESIHLSAPLVALRNKEVNLTAVLWPNQVGTVTYIWWIANNT
EPVITLEGSLPCTFSREGISTVTVQVSAGNTILQDRKNIVVHEYFRSHLLAFSSNLDEQN
PDVAEWRLDVSRVIKNALIQSTGVREEQLLVTVLPGLPTTAEFFLLPSKWLQKSPAHLDQ
LSEMLLSALNQNLVQFTLRPGIQVTVYAAHHSAAPLVDTSENQSGSAMLMLLSVVVVGLV
VFIIYKFKRKIPGLNVYAQMQNEKEQEMTNPGNPTEARPNSQRDVQSLEILDTEFNSRPV
GCIKAPVHVKFSTELPSYIV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggagagggggatccaattctctcctaagtggcagagtctgcttttggctttgctcttg
gtggccctttggttctctcgctcctcaaaatccgagatcacctgcaggtcatgtcaacct
ggaaacaaaaggcgtccgcaggaactgctgctaaaattcgacgcgggcataaaaggagag
gtttttggagccgtgaaaggggcgacaagtgcagaaagtcagcggcgtcgttgcgcggaa
gggtccaccgaatgcgttcagcaacgcgcggtgtcagtgatggaacggaatacgcgccac
ctgctgccaagcggcgaccccggcgaaagcttccgctcaaagacgaaagtttccccggtg
agtggacagcaagaggtaaccgaggcttccgtgtccgacaccgagctcaggaagcgtctg
aggaggaacgctgatactaaaagtgaaggacgcctttcagcccggacgcagacgctttcc
gcgagtgcggctccgcgcagagtgacgcgctggagcggagaggagcgcaaagcggctgcc
gcgcggcaggatgagcccaaactgaacagctccaccttcgccttgactggagactcatct
cacaaccaggctatggtgctgtggtccggccagaacagcagcgtgattttgatgctgacc
aaactctttgacttcaacctcaacagcgtgacagagagttcattgtggaggtcaactgac
tatggaggaaaataccagaagctgaacgacaaaataggagcaaagacaatcctcagctac
ttgtatgtgagccccaacaacaagaggaagatcatgctgttaacggatcctgaagtggag
agcagtctgcttatcagctctgatgaaggagctacgttccaaaagtatcggctgaacttc
tacatcctaagcctacttttccatccagagcaggaggactggatcctggcctacagccac
gatcagaagctctacagctccgtggagtttgggaggaggtggcagctggtgcatgagaag
gtggctcccaatcgtttctactggtcaaaattgggtttggacaaagagcctggtttaatt
cacctggaaactagtgtctctgaaggacaggcattatatataacctgcaagctgcaaaac
tgcacagatgccaacaaggccaaaccgttccctggctacatcgaccccaattctctggtg
gtgcaagacgagtacgttttcgtgcaggtgtcaacagcagggaaaccaatctactatgtg
tctgctaaaagagacgtcttcacacccttgaagcttcccaaatacaccctgccgaaggac
ctgcatgtgatcagcacggatgaaaaccgtgtggtggcagctgtgcaggagtggaaccag
aatgaaacctataacctgtacgtgtccgatacgttgggggtctattacaccctggccctc
gagaatgtggtgagcagcatcggccccgagggcaacgtcatggtggatctctacgaggta
gcagggataaaggggatgttcctggctaacagaaaactggaaaaccaagtgaagacatac
atcacctataacagaggcagagactggaggttactgctggccccgagccaagacctgaag
ggcaacagcatccactgtgtgctgccatattgttccctgcatctccatcttcatgtgtct
gcaaatccctacacgtctgggaacattgccagcagggagtcggcaccgggaatcattgtt
gcatcaggctgcactggctctggactgagcagcagcaacgtcactgtgttcatcacgtca
gatgcaggaaacacgtggagacagatctttaacgaggaatatgctgtgctgtatttggac
caaggaggagccctcgtggccatcagacacactccacttcccattcgacacctgtggttg
agctttgatgaagggcatttctggaacaagtacagctttaccaacacccctctgtttgtg
gacggagtgctgggagagcctggagaggaaactctcatcatgacgatatttggccacgtc
agccatcgttcagaatggcagctggtgaaaatagacttcaggtccatcttcaacaggagg
tgtactgaggcagactatcagacctggcatctccacaatcagggtgagccatgcctcatg
ggagtgaaaagaatctaccagaagctgaaacccacatccagatgtgtgatggggaaaaca
cactcggtgtcaatgatgtccagctcctgtgaatgcacagaggctgactttgaatgtgat
tatggattcgagagacaatcaaatggcaaatgtgcgcccgcattttggtttcacgcctcc
tccgtgtccagaaggtgcaccgcaggaatgatgttcctgaacaccaccggctacagaaaa
gtcgtctcaaataactgttcagctggagtcagcatggagtacacagccaagaggcagcag
tgccaggtccaagcgcccaaaggtcttcacctggtgaccagcgagggcacgttgacggcc
acccttggctccaacgtcaccttccttgtttttctagaggagggcgacagtgcaaggacg
agcattacactggacttcggtgacggccgtgctctaacctactccaacgtcagcgccatt
gaggatggcatcaagcacatctacagagatgtggggatctaccgcgtggctgcgattggg
gagaattactttggatcagaaactgcaacattgtacctgcatgtgacaagccagctggag
tccatccatctgtcagctcctttagtggctttgaggaacaaggaagtgaacttgactgct
gttctgtggcccaaccaagtgggaacagtcacctatatctggtggattgcaaataacact
gagccagttatcaccctagagggaagcctgccgtgcacattctccagggaaggcatcagc
acggtcacggtgcaggtgtctgctgggaatactatcctgcaggatagaaaaaacattgtt
gtccacgaatatttccgatcgcatctgctagccttttcatctaacctggatgagcagaac
cctgatgtggcagaatggaggctggacgtgagccgtgtcatcaagaacgctctgatccag
tcaacaggcgtgagggaggagcagctgctggtcaccgtcctgcctggtttacccaccaca
gcagagttcttcctgttacctagcaaatggttacagaagagtccggctcatttagatcag
ctttctgagatgttgctgagtgccttaaatcaaaacctggtccagttcacgttaaggccc
gggattcaagtcactgtgtatgcagcacaccactccgccgcgcccctagtggacaccagt
gagaaccagagtggctctgcaatgctcatgctgctatcagtagttgttgttggtttagtt
gtgtttatcatctacaaattcaaaaggaagatcccaggcctcaacgtctatgcacagatg
cagaacgaaaaagaacaagaaatgacgaatccaggtaatcccacagaggcgcggcccaac
tcacaacgggacgtgcaatctttggagattctggacacggagtttaactcccggccagtc
ggatgtataaaagctcctgtacatgtgaaattctccacagaactcccctcatacatcgtg
tag
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