Takifugu flavidus (sansaifugu): 130527166
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Entry
130527166 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 2-like
KO
K14946
RNA binding protein fox-1
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfs03041
]
130527166
Spliceosome [BR:
tfs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130527166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
130527166
NCBI-ProteinID:
XP_056891365
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Position
6:complement(33927..58398)
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AA seq
456 aa
AA seq
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MLMSTDVASIMVPVSRGLLDRERELDTMTGVHPSAGGAPAVVRGMKRGDPEPDGQXGATL
VDTAGAECKRPRIDGSGGLGENNDPLTLYHGYPSHSQGSQDSVGGQEGLVPPAFSAFPPP
PPPPPQNGLTLDYGGSLYAAGSVQGPVEAGGPASSAPNAANSLAAQSDGSSQLDGQSGVG
SGGGGAGGTAGVDSDDKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFETSADAERAKEKLHGTLVEGRKIEVNNATARVMTNKKMTTPYANGEGLAALPY
AGWKLTPMVGAMYSPELYTVPGFPYSAAAAAAATTAATIRGAHLRGRARPVYSAVRAAVP
QPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSYGRVYT
ADPYHAALTPAAAAAAYGVGAMATLYRGGYSRFAPY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatggtgcctgtgtcccggggtctcctggac
cgggagcgagagctggacaccatgaccggagtgcaccccagcgcgggcggtgctcccgcg
gtcgtgcggggcatgaagcgtggagacccggagcccgacggacagngcggcgccactctg
gtggacacggccggggcagagtgcaagcgtccccgcatcgacggctcgggaggactcggc
gagaacaacgacccgctcaccctctaccatggttacccctcccacagtcagggctcccaa
gacagtgttggcggtcaggagggactcgtgccaccagccttctctgctttccccccaccg
cccccaccgcccccccagaacggcctgaccctggactacggtggcagcttgtatgcagca
ggatccgtccaaggcccagtggaagcaggcgggccggccagcagtgcccccaacgctgcc
aacagcctggctgcccagtcggatggctcctcccagctggacggtcagtcgggggtcggc
tcaggaggaggtggtgctggaggaactgcaggggtcgactccgacgataaggggacccct
aaacgcctccacgtgtccaacatccccttccgcttcagagaccccgaccttcggcagatg
tttgggcaatttggcaaaatcctggatgttgagatcattttcaacgaaaggggatccaag
ggtttcggttttgtaacgtttgagacgagcgcggacgcagagagggccaaagagaaactt
cacggtacgctggtggaaggacgtaaaatcgaggtcaacaacgccacagccagagtgatg
acgaacaagaagatgaccaccccttacgctaacggagaggggctcgccgcgctgccatac
gctggatggaagctgactcccatggtcggagccatgtacagtcctgaactctacacagta
cctggcttcccctactccgccgctgccgctgccgctgccactactgccgccaccatccgg
ggagctcacctgcggggtcgtgctcggcccgtctacagtgcagtcagggcagcggtgccc
cagccggccatccctacttacccaggtgtgatggcctatcaggatggcttttacggtgcc
gctgacctctatgggggctacgcagcgtatcgttacgcccagccggccgccgtagcgacc
ccggcggcggcggccgctgcagcggcagcgtacagcgacagttacgggcgggtttacacg
gcggacccctaccacgccgcgctcacccctgctgccgccgccgccgcttatggcgtcgga
gccatggccacactctacagggggggctacagtagatttgccccttattaa
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