Takifugu flavidus (sansaifugu): 130529464
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Entry
130529464 CDS
T09160
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04512
ECM-receptor interaction
tfs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130529464 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130529464 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tfs00535
]
130529464 (agrn)
Proteoglycans [BR:
tfs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
130529464 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
SEA
Laminin_EGF
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
130529464
NCBI-ProteinID:
XP_056895684
LinkDB
All DBs
Position
8:3108711..3307726
Genome browser
AA seq
2108 aa
AA seq
DB search
MSSRGALRAGRTALLFAGLLVALWQRCAASCPEKNLEDREEEANVVLTGTVDEIINMDPV
HNTYSCKVRVWRYLKGKSSVDREILLDGGNKVMIGGFGNPQICDNQVATGDTRIFFLNPS
SLSMGPEHKNELKLNSSLMRITLRNLEDVEHCVEAHKYIIADKPPHFTPAQPPDGCRGML
CGFGAVCERDPTDTSKAECVCKRVECPSLVAPVCGSDSSTYSNECELEKAQCSAQRRIKV
LRQGPCSLKDPCTEVTCSYGSTCIQSTNGLSAKCMCPLGCVGKAEQTVCGSDGEDYRNEC
ELHQHACKSQKNIRVQYQGRCDPCSDSENSLSTLCRVEALTRQPHLFGLPQSCPPGNEPL
CASDGQTYPSECAMTATGLQKGIKLRKVHAGRCRRQDDCQEDCLFNAVCVVEQLNTRCSC
DPIECDGAYRPVCGKNGRTYANDCARRRAECLTTTLIPIQHPGPCDLSIPSPCVDKVCDH
GAVCVVKNDEPVCECPEACPQTSDPVCGSDGRSYGSSCEMRAMGCALQKPIHIQHKGPCD
ESCGKCTFGAICDAQSGQCVCASECVESNQPVCGSDGTTYNSECELHVRACKEQMDLRVV
SQGECKTCGGIVCAWGARCVKNKCECTQCSGEAFSAVCGSDGLNYNNECELRMASCVLKR
RIDVVKHGSCDEDCGSGGSGSGAESCEQDRCRMFGGSWDEDAEDDRCVCDFTCQSVPNNA
VCGSDGNNYSNECELKKARCEKQEHLLIQNQGPCAVVSVKPAPELTAPQHCSQSVYGCCL
DSMTAALGVGLAGCPSTCQCNVYGSYKGTCDPNTGQCSCKPGVGGQKCDRCEPGFWNFRG
IVTENMSGCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDESKMGMNGCDKGP
ESPTSCEDLICKFGASCIEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYADQCQLRTIAC
RQDKDIAVQHFGQCTESITEPADRPTFNLPATTPSSAAATTITTTAPFHPNMVEALPPPR
TEETEPTERPPIATPVSTFTHNRVNSNLRHSIHMQPEPQATTASPSHSSPAPSPALESFE
ESGSGEPSGDDVTEEEEELEDDAGSGLPLEASGADDASGFTVLSITLPTAEERASCDNKE
FGCCPDGKTAASNPEGTNCPSTIRFSGFLHLDQVEGQEIFYTPEMEDPKSELFGETARSI
ENALNDLFRKSEVRNDFMSVRVRNLAPSNSILAVVEAHFKPDTRYTVEDIEGALLKQMKA
SKDTSIAVKKPEVENIRFTNYDVPSFPVFTTTTTTTASVTTAAPTTTATYVRPQTTSPFI
TRRPPGTTRRPFNSRRKTTTSTPNTTPLTTTSTMVTVTTNTLPATSTVSRASTQPNHRAR
NPCSSHPCLHGGTCEHQGGEFSCKCPAGRGGAVCEKVIKYFFPSFGGQSYLAFQTMSAYH
TVRIAMEFRASEMTGILLYNGQNGKKDFISLALVNSRVELRFNTGSGTGTLVSKVQVDQG
RWHQLVVTRNRRSAVLSVDNEPHVEGESPRGTDGLNLDTNLFIGGVPPEMKDVAREQTAV
ATGLVGCIRMLDVNNRVLNLQENGGDSLYGSGVGECGNNPCQPNPCKNGAACQVKEAEMF
HCKCSKGFWGPTCADVHDPCEPNRCHPSSQCQALPEGGYKCECPMGREGRHCEKVAERRG
VYMPLFNGDSYVELKGLHRYGHDLRQKVSMTVVLMANDSNGLIFYNGQKSDGKGDFISLS
LHDGILEFRYDLGKGPATIRSREPIRLNVWNTINLERSNRKGEIMVNKKDPVRGEAPNLH
VDLNLKESLFVGGAPDYSRLARAAALTEGFKGTIQKIILMGTPIFKEDNILRSSNVATFQ
EHPCAQEPCHNGGQCNPKLDTYECVCLSGFSGGHCQSTIYEKSAGETEAIAFDGRTFIEY
HNAVTKSQLTNEIPDPESLENPSDQSEKALLVNKFELSIRTEATQGLVLWSGKGVERSDY
IALAVVDGHVQMTYDLGSKPVVLRSSMRVDSNRWIRIKASRALRDGSLQVGNEAPVTGSS
PLAATQLDTDGALWLGGLEELAVARRLPKAYSTGFVGCIKDVVVDGVELHLVEDALNSPQ
ILQCPAAK
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaggggcgcactccgggccggccggacagcgctgctcttcgcggggctgctc
gtggctctgtggcagcgctgcgccgcaagttgcccggagaagaacctggaggacagggaa
gaggaggccaacgtagttctgaccggcaccgtggatgaaatcattaacatggacccggtg
cacaacacctattcttgcaaggttagggtgtggcgctacttgaaagggaagtccagcgtc
gaccgtgaaattctcctggatggcggcaacaaggtgatgataggcggctttggcaacccc
caaatctgcgacaaccaggtggccacgggcgacacgcgcatattctttctcaacccttct
tcgctgtccatgggcccggaacacaaaaatgaactcaagctcaactccagcctgatgagg
attaccctgcgtaacctggaggatgtggagcactgcgtggaagctcacaaatacataatt
gcagataaaccacctcacttcacgccggcgcagcctcctgatggctgcagggggatgttg
tgcggctttggtgctgtatgcgagcgggacccaaccgacacctccaaggccgagtgtgtt
tgcaagagagtggaatgtccctctttagtggcacctgtttgcggctcggattcgtctacc
tactccaatgagtgcgagctagaaaaagcccagtgcagcgcacagcgacgcatcaaagtg
ctacgccagggtccctgttcgttgaaggacccctgcacggaggtgacctgcagctatgga
agcacctgcatccagtcgacgaacggcttgtcggcgaagtgcatgtgccccctcgggtgc
gtgggcaaagctgagcagacggtgtgcggcagcgatggagaggactaccgcaacgagtgt
gaactccaccagcacgcctgcaagagccagaagaacatacgagtgcagtaccagggccgc
tgtgatccgtgctcagacagcgagaacagcctgagcacgctctgccgggtcgaggctctc
acccgccagccgcacctgttcggcctgccgcagtcgtgtccgccaggtaacgagcctctc
tgcgccagcgacgggcagacgtaccccagcgagtgtgccatgactgccacgggcttgcag
aaaggcatcaagctcagaaaggtccacgcgggccgatgcaggaggcaggatgactgtcag
gaagattgtctcttcaacgccgtgtgtgtcgtggaacagctgaatacccgttgctcctgc
gaccccatcgagtgtgacggcgcctaccggcccgtgtgtggcaaaaatggccgtacttac
gccaacgactgcgcgcgacgaagagcggagtgtctgaccacgaccctcatccccatccag
cacccggggccctgtgatctcagcatacccagcccgtgcgtggataaggtgtgcgatcac
ggggcggtttgcgtggtcaagaacgatgagccggtgtgcgagtgccccgaggcttgcccg
cagacatccgatccggtgtgcggctccgacggccgcagctacggcagttcctgcgaaatg
cgagccatgggctgcgccctgcagaagcccattcacatccaacacaaaggaccctgcgat
gagtcctgtggcaaatgcacatttggggcgatctgtgatgcccagagcggtcagtgtgtg
tgcgcttccgagtgtgtggagtccaaccagcctgtgtgcggcagcgacggcaccacttac
aacagcgagtgcgagctgcacgtgcgcgcctgcaaagaacagatggacctccgagtggtc
agccagggagaatgcaaaacatgtggcggcattgtttgtgcctggggagcccgatgcgtc
aagaataagtgcgagtgcactcagtgctccggcgaggccttctcagcggtgtgcggcagc
gacggcctcaactacaacaacgagtgcgagctccgcatggcgtcctgcgtgctgaagagg
agaattgacgtggtcaagcacggcagctgtgatgaagactgcggctcgggaggctcggga
tctggcgccgagagctgtgaacaggaccgctgccgcatgttcggaggctcctgggacgaa
gacgccgaggacgaccgatgcgtctgcgatttcacctgccagagcgtgccaaacaacgca
gtttgtggctccgacggcaacaactacagcaacgagtgcgagctgaagaaggccagatgt
gagaaacaagagcacttgttgattcagaatcagggaccctgtgcagtggtttcagtcaaa
cctgcgcctgagctgacagcgccccagcactgcagtcagtcagtctacggctgttgcctc
gacagcatgacggccgccttgggggttggactggctggatgtccgagtacctgtcagtgt
aacgtctacggctcctacaagggcacatgtgatccaaacaccggccaatgctcctgtaag
cctggtgtcgggggacagaagtgcgaccgctgtgagccgggcttctggaacttccgtgga
atcgtgacagaaaacatgagcggatgcacgccgtgcaactgcgacgctacgggctcggtc
cgggatgactgtgaacagatgtcaggtctgtgttcctgcaagacgggagtcaaaggcatg
aaatgcaatgtgtgtccagacgaaagcaagatgggcatgaacggttgcgacaaaggccct
gaatccccaacatcctgtgaggatttaatctgtaaatttggagcttcgtgcatcgaggtg
aacggccaagcccattgcgagtgcccgtcccctgattgcgacgagaaaaacaagaccaag
gtgtgtggttctgatggggtgacctatgccgaccagtgccagctgaggaccatcgcctgt
aggcaggataaggacattgccgtgcaacactttggacagtgcacagagtccatcaccgag
ccggcagaccgacccacattcaacctacccgccaccactcccagctcagcagccgccacc
accatcaccaccaccgccccattccaccctaacatggtggaggcccttccacctccgagg
accgaagagacggaacctacagagcggcctccgatcgccacccccgtttccaccttcacc
cacaaccgtgtgaattcaaacctccgccactccatccacatgcagcctgagccgcaggcc
accacagcttctccttctcacagcagccccgccccctccccggctttggagtccttcgag
gaatctggcagcggcgaacccagtggggatgatgtgactgaagaggaagaggaactggaa
gatgacgctggtagtggcctgcccttagaagccagtggggcagatgatgcatctggtttc
acagttttaagcatcactttgccaactgccgaggagagagcctcctgtgacaacaaggag
tttggctgctgccccgatggcaagacagcagccagcaatcctgagggcaccaactgtcct
tctaccatacggttcagcgggttcctgcatctggaccaggtggagggccaggagattttc
tacactcccgagatggaggatcccaagtcagagctgtttggagagaccgctcgtagcatc
gagaatgctctgaacgacttgttcaggaagtcggaggtgcgcaatgacttcatgagcgtt
cgtgtccgtaacctggcgcccagcaactctatcctggccgtcgttgaggcccacttcaaa
ccagataccagatacacagtggaagatatcgaaggagccctgctgaaacagatgaaggcc
tccaaagataccagcattgccgtgaagaagccggaagttgagaacattcgcttcaccaat
tatgatgtcccttcattccccgtgttcaccacaactaccaccaccacagcctcagtcacg
acggcggctcccaccaccacagccacttatgtgcgacctcagacaacctcccccttcatc
acccgccgcccgccaggcaccacacgccggcctttcaacagccggcggaaaactacgacc
tcgaccccgaacaccacgcctctcaccaccacctcgaccatggtgaccgtcaccaccaac
acgctccctgcgaccagcaccgtgtcccgcgccagcacccagcctaaccacagggcgcgg
aatccctgcagctctcatccctgcctccacggcggaacctgcgagcaccaaggtggagag
ttcagctgcaagtgtccagctgggcgaggaggtgccgtgtgtgaaaaggtgatcaagtac
ttcttcccatcattcggaggtcagtcctacctggctttccaaaccatgagcgcctaccat
accgtccgcatcgccatggagttcagagcatctgagatgactggcattcttctctacaat
ggccagaatggcaagaaggacttcatctctctggctctggtcaacagcagggtggagctc
aggttcaacacaggatcaggaacaggtacactggtcagcaaagtccaagtcgatcagggc
cgctggcatcagctggtggtgactcgcaacagacgcagtgcggtgctcagtgtggacaac
gagccgcacgtggagggcgagagtccacgcggcacagatggcctcaaccttgacacaaac
ctctttatcggcggagtgccccctgaaatgaaggatgtcgcaagagagcagacagctgtg
gccacaggcctggtgggctgtatccgcatgctagatgtcaacaaccgtgtgctcaacctg
caggagaacggcggcgacagtttgtatggcagtggtgtaggtgaatgtgggaacaacccc
tgccagccaaatccctgcaagaacggcgcggcatgccaagtcaaggaggcagagatgttc
cactgcaagtgcagcaaaggattctggggaccaacctgtgccgacgtccatgatccatgc
gagcccaacaggtgccatccgtcctcccagtgtcaggcgctgcccgagggaggctacaaa
tgcgagtgccccatgggacgagaagggagacactgcgagaaagtggctgagaggagaggg
gtttacatgccattattcaatggagattcttacgtggagctgaaggggctgcatcgctat
ggacatgacctgcgtcaaaaggtcagcatgacagtcgttctcatggcaaacgactccaac
ggtttgatcttttacaatggccaaaagtcagatgggaaaggtgacttcatctccctgtcc
ctccatgacgggatcctggagtttcgctatgacctggggaagggacccgcaaccatcagg
agcagggagccaatccggctgaatgtgtggaacaccatcaacttagagcgctccaaccgc
aagggagagatcatggtgaacaagaaggaccctgtccgaggggaggcgccgaacctgcac
gtagatcttaacctgaaagagtctctttttgttggcggagctccggattacagccgacta
gcgagagccgctgcgctcacggagggcttcaagggaacaatccaaaagatcatcctgatg
ggtacccctatcttcaaggaagacaacatcctgcgctccagcaatgtagccaccttccag
gagcacccgtgtgcccaggagccctgccacaacggcggccagtgcaaccccaagctggac
acctacgagtgcgtctgcctcagtggtttctcaggaggacactgtcagagcaccatctac
gagaagtctgccggggagaccgaggccatcgcctttgatgggcggacattcattgagtac
cacaacgcagttacaaagagccaactgaccaatgagatcccagaccctgagtctctggag
aacccatctgaccagagtgaaaaagctctcctggtgaataagtttgaactgagcatccgg
acagaagcgacccagggcctggtgctgtggagcgggaagggcgtggaacgctccgactac
atcgccctcgccgtcgtggacggtcacgtccagatgacttacgacttgggctctaaaccc
gtggtgctgcgctcctccatgcgtgtcgatagcaaccgctggatacgcatcaaggccagc
agagcactcagagacggctctctgcaggttggtaacgaggcaccggtaacagggtcgtcg
cctttggcagccacgcagctggacacagacggagctctctggctgggtggtttggaggag
ctggcggtggcccgtcgactgcccaaggcctacagcaccggctttgtgggttgcatcaaa
gacgtggtggtggatggcgtggagctccacctggtggaggacgccttaaacagcccccaa
atactacagtgtccggctgccaaataa
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