Thermococcus gammatolerans: TGAM_1877
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Entry
TGAM_1877 CDS
T00920
Symbol
truD
Name
(GenBank) tRNA pseudouridylate synthase D (TruD)
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tga
Thermococcus gammatolerans
Brite
KEGG Orthology (KO) [BR:
tga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tga03016
]
TGAM_1877 (truD)
Enzymes [BR:
tga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TGAM_1877 (truD)
Transfer RNA biogenesis [BR:
tga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TGAM_1877 (truD)
Prokaryotic type
TGAM_1877 (truD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACS34379
UniProt:
C5A1W0
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All DBs
Position
complement(1804151..1805398)
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AA seq
415 aa
AA seq
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MDYREFFSQFRHLSEKPGIGGKIKILPEDFVVIEDPLPQIFEGRKHAIFLLKKRNWDTMA
VIKEIAKRAGISHRDIGFAGTKDRHAVTYQYISVPAGAKEKVESIQIRDVELRFVSYGRF
IKLGHLLGNRFRIIIRDVEGSAFDRTKEIIRELREKGGFPNYFGYQRFGERRVVNHLIGK
LLLQGEFDEAARLFLGYADGSMEGDEARRNFWETEDVDRALEEFPRFLRYERTLLYTYKK
TGSWKKAFLSLPLPIMRIFIHAYQSYLFNLYLSRRIEELPLNEPLVGDIVVQVKGGIPYR
DRTYRVTETNLNFVREKVKRGEAMVSGPLFGFAMRRAKGIPGELEEEILEGEGITLDAFK
KLPKPMAEPGRRRELLIRPIGLTYGYLPETGMCFRFFLPKGVYATSVLREIMKDH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggactaccgcgagttcttctcccagtttcgccatctgagcgagaagcccgggataggg
ggtaaaatcaagatccttcccgaggacttcgtggtgattgaggatccccttcctcaaatc
ttcgaggggaggaagcacgcgatttttctcctcaaaaagcgcaactgggacactatggca
gtgataaaggagattgccaagcgtgccgggataagccaccgtgatataggcttcgcgggg
acaaaggacaggcacgccgtaacttaccagtacataagcgtgccagccggggctaaggag
aaggtcgaatccattcaaatccgggacgtcgagctgaggttcgtctcttacggccggttc
ataaagctcggccatctgcttggcaaccgctttaggataatcattcgggacgttgagggg
agtgcctttgataggactaaagaaataattcgggaactccgcgagaagggtggctttccc
aactacttcggctaccagcgcttcggcgagaggagggtcgtgaaccacctgattggaaag
ctcctcctccagggggagttcgatgaggcggcgaggctcttcctcggctacgccgacggg
agcatggagggcgatgaggcaaggaggaacttctgggagactgaagacgtggatagggct
ttggaggagttcccgcgctttctccgctacgagagaaccctgctctacacatacaagaag
accggaagctggaaaaaggccttcctgtcgctcccgctcccgataatgcgcatcttcatc
catgcctaccagagctacctcttcaacctctacctatcgaggagaatcgaagagcttcca
ctcaatgaaccgctcgtcggagatatagtcgtccaggttaaaggggggatcccctaccga
gataggacctaccgagttaccgagaccaaccttaacttcgtccgtgagaaggtgaagaga
ggcgaagcaatggtttcgggcccgctcttcggtttcgcgatgagaagggccaagggaatc
ccgggtgaacttgaggaagaaatccttgagggggagggaataactcttgacgcctttaaa
aaactgccaaagccaatggccgagcctggaagaagacgggaactcctgataaggccgatc
ggtctaacatacggctaccttccagagactgggatgtgcttccgcttctttcttccgaag
ggggtttacgcgacgagcgtcctgcgcgagataatgaaagatcactga
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