Torulaspora globosa: HG536_0A09240
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Entry
HG536_0A09240 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tgb
Torulaspora globosa
Pathway
tgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG536_0A09240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0A09240
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HG536_0A09240
mRNA degradation factors
5'-3' decay
Decapping complex
HG536_0A09240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
59324204
NCBI-ProteinID:
XP_037137782
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Position
1:complement(1637314..1639917)
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AA seq
867 aa
AA seq
DB search
MSFFGFDASGRHSRERNGDSHEKESPLDFEDTYKGLGEYEAEEEDFLNDETFGAGAELGT
DFDFGHGNGNSGPSGAAASSSYASGGRSYVAVARSGVEHSTRQPLDASVDLRPMESLWSS
GVTPAQAQEQSQTLSMEELERQQRHRQMGGQPGFMAMPPPGYGMPAPPQGFPQQPQAQAG
PGPNVPFGNQFPSPYPPRGMQPGVQGMPPQFQNMPAMFNQAYNVPQGHAPNHQFPGMFPP
PPSSQTEPPSEARDAQRLQSVDQNASAAQNASPGRQPVQRALSPQQQRLQTLQAQPSQQQ
QQQPSSPQPMISPPQTPREHGRSNRGQTRREPMTPEEQKRLQIRQAKVEKILKHSGLMTP
RDKDFITRYQLSQIVTEDPYNEDFYFQVYKIIQRGGVVGESNKDLIARAYLEHSGHRLGG
RYKRADVALQRMQSQVEKAVTVAKERPQKNKDHSDAAREGVLGRISSSMNSKAPRRQLQI
PVHKTGDDSADDSKLSRGGNQALNVVTESLDQVEISQQSRARRRSSYAFTSVDQNSVLSR
SGGRKFVLSLIETVYEEVLELEAQLRGGNAVDSTTLWEALHIGDSSYEVCPFISMLSFDK
GIKIMPRIFNFLDNAQKLKLLQTFFGELSHLNIIIISSYKTNTSPSESQLKQIELFQAVF
LKIIVSFLSSSANFIEIMGLLLYLIKNNNVSFISTSKIGLNLITVLISRAALIRQDINRT
NVLSSPEISAWNEVYDKLFTSLETKLFLVFPPKEYMEKIVQATSRPAHGAGSSQAVPKAL
TASYDQAYIWQFLASLALSGKLNHQRIIIDEIRDEIFGTISVAEELGKSQEDATASQYKK
DKLYQDLNLFLNVMGLVARDGEITELK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctttgggtttgatgcgtctggacggcattccagggaaaggaatggcgacagt
cacgagaaagagagcccattggactttgaagacacatataagggacttggggagtacgag
gccgaggaggaggactttttgaacgacgaaacgtttggggcaggtgccgagctgggtact
gattttgatttcggtcatggaaatggtaattctgggcctagtggggccgcagcgagttca
tcgtatgcgtcaggcggtaggtcgtacgttgctgtcgccagatctggtgtagagcattca
acgcgacagccacttgatgcttctgttgatttgagacctatggaatcgctgtggagtagc
ggcgtgacgccagcacaggcacaggaacagtcgcagaccttgtcgatggaggagcttgaa
agacagcagcgtcacagacagatgggaggacaaccagggttcatggctatgccgcctccc
ggttacggtatgcccgccccaccacaggggtttcctcagcagccgcaagcgcaggcgggg
cctgggccaaacgttccgtttggaaaccagttcccatcgccatatccgccacggggcatg
cagccaggcgtgcaaggtatgccaccgcagttccagaacatgccagctatgttcaatcaa
gcctacaacgtgccacagggtcatgctcctaaccatcaattcccgggaatgtttccacct
cctcccagctcgcaaactgaaccaccgagcgaagcgagggatgctcagaggctgcagtca
gttgatcagaatgctagtgccgcgcaaaatgcttctccaggacgccaaccggttcagcgg
gccctttctcctcaacagcaacgccttcagacacttcaggctcagccctctcagcagcag
caacagcaaccatcgtccccccagccaatgatttcgccaccccaaacgccaagggaacac
ggaagatctaatcgtggtcaaacaaggagagaacccatgactcctgaggagcaaaagcgg
ctgcaaatccgtcaagcgaaggtggaaaagattttgaagcactcaggtttgatgactccc
cgtgacaaggactttatcaccagatatcagctgtcgcaaatcgtcactgaagatccatac
aacgaagatttctacttccaagtgtacaagatcattcaacgtggtggtgtcgtgggagaa
tcgaacaaagacttgattgcccgtgcttatcttgagcattcgggccataggctcggaggt
cgctacaagcgtgcggatgtggcattgcagagaatgcagagccaagtcgagaaagctgtg
acagttgctaaagaaagacctcagaagaacaaagaccattcagatgctgctcgcgaaggc
gttctcggtagaatctcctcctcaatgaacagtaaagctcctcgcagacagctgcaaatc
ccagtgcacaaaacaggagatgacagtgccgatgatagtaaattgtcgcgcggtggaaat
caagcgctcaatgttgtcactgaatctctagatcaggtggaaattagccaacaatcccga
gcaagaagaagatcttcctacgctttcacatccgtggaccaaaactctgtgttgtcgcgc
tccggtggtaggaagtttgttttgtctttgatcgaaactgtttatgaagaagtgcttgag
ctcgaagctcaattaagaggtggcaatgccgttgacagtactaccctgtgggaagcttta
catattggggacagttcttacgaagtctgtccattcatatccatgctttcttttgacaaa
ggtatcaagatcatgcctcgtatcttcaacttccttgacaacgctcagaaattaaagtta
ttgcaaactttcttcggtgaactatcgcacttgaacattattataatcagctcatacaag
acaaacacatcccccagcgaatctcagttgaaacaaatcgagctgttccaagctgtcttt
ctaaagataattgtgtcgtttctatcaagcagtgctaactttatcgagattatgggttta
ctgctctatctgatcaagaacaataacgtatcattcatctccacttctaaaattggtttg
aatttgatcacggttttaatttctcgtgctgctctcattagacaggacatcaacagaaca
aacgttctatcctcgccagaaatatcagcctggaacgaagtgtatgacaagttattcact
tccttggagaccaagcttttcctagtcttcccaccaaaagaatacatggaaaagatcgta
caggcaacttcacggccagctcatggtgccggttcgtcccaagcagtgccaaaggctctg
acggcctcgtacgatcaggcatacatctggcagttcttggcttcactggccttgagcgga
aagcttaaccatcagcgcataataatcgacgagatcagggatgaaatcttcggcaccatc
agtgtcgcggaggagctcggcaagtcccaagaggatgccaccgcatcacagtacaagaaa
gacaagctatatcaggacctaaacttattcctgaatgtcatggggcttgttgccagagat
ggtgagatcacagagctgaaatga
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