Torulaspora globosa: HG536_0H04610
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Entry
HG536_0H04610 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HG536_0H04610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgb03400
]
HG536_0H04610
Enzymes [BR:
tgb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
HG536_0H04610
DNA repair and recombination proteins [BR:
tgb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
HG536_0H04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
Motif
Other DBs
NCBI-GeneID:
59328351
NCBI-ProteinID:
XP_037141759
LinkDB
All DBs
Position
8:824400..827309
Genome browser
AA seq
969 aa
AA seq
DB search
MEVTEGFVDDAEAPPNDVLSLEPPEDSPKNFAPSPDFLWLCEELFIRVEDVKKQGRERLG
SKPISMRYYDVIHHFVKLWRRTVGDDIYPAFALILPYRDRRIYNIKDYTLVKAVCNYLAL
PKQSATEKRLLKWKRRATRGSRLSNFCVTEIKKRKSEPSPERRITIDKLNECLDQLVEER
NAKGGFKGLSESPAFNFCLQNMTFVELKFFFDIILKYRLIGGQEDKLLSCWHPDAPEYLS
VVSDLKTVTKRLWNPENRLRHDDLSINLGYAFVPQLAKKVSVSYEKICGKLKNDFVIEEK
MDGERIQVHYMDFGGSVKFLSRRGIDFSYLYGESISEGPVAQYLKFNPNVKDCVLDCEMI
TYDTDRGVVLPFGLVKSSARQALSMEGICTQGYRPMLMVLDLVYLNGVSLIKLPLHQRKE
YLVKILTPFPHAVDILSYVRCSDQIAIKRSLERAISMGSEGIVLKNFNSRYEIGARNDNW
IKVKPEYLEQFGENMDLIIIGRDPGKKDSLMCGLAVYENESDAAEIKAAEEAEIISLDSD
REEADEPDHNKVIKKFISFCIIANGISQEEFKDIDRRTRGNWTKSEDRLPPSSLLEFGSK
IPEEWIDPKKSLIIEVKARSLDNTESSKKKFSAGCTLHGGYCRRIRDDKDWTGCYSLSEL
WRERRQRSGTAIGSLNKKYPKTDKARRKRNDIFVDQALEMDDAGLKSNVFANLYFYVLSD
YIDPELNTRITKPQLNNLIKQNSGMLVQNLISKHHMENSFRIISGKLTGECKSLINRGYD
ILSPRWILDCVSYGKLVRIEPKHCFNVSEELMKIARERVDRFGDSFVSTISEQQLESLIT
SNIDSTPVTDYNHMDRSPELSQVPIFLFSGRICYVPEMFFSATERAALLSKIKLYGGLVA
SELINCNLIVVSMTTCSRDPPLQKLRESVAQLIANFDSPQPIPHLVTSEWIDRSIQENCQ
VPEEDFYPA
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacagaaggctttgtggatgacgctgaagccccaccaaacgatgtattatcg
ctggaaccaccggaagatagtccaaagaactttgcaccatctcccgatttcttgtggctt
tgtgaagaattattcatacgtgtggaggacgttaaaaaacagggcagagagcgtcttgga
tccaaacccatttctatgagatactacgacgtgatacatcatttcgtcaaattgtggcgg
agaactgttggcgatgatatatatcctgcgtttgctttgattcttccctacagagatcgg
cgtatctataatatcaaagattacacgttagtgaaagcagtctgcaactacttggcactg
cccaagcagtcagctaccgaaaaaaggttgctaaaatggaagcggagggcgacaagaggt
tcgcgattatcaaacttttgcgttactgagatcaagaagagaaagagcgaaccttctccg
gagaggcggattaccattgataaactaaatgagtgcttggaccaactggtggaggaacga
aatgcgaaaggaggcttcaagggattgtcagaatctcctgccttcaacttctgccttcag
aatatgactttcgtagagctcaagttctttttcgatattatactgaagtacagattgatc
ggcgggcaagaagacaaattgctgagttgctggcatcccgatgcacccgagtatcttagt
gttgtgtctgacctcaagactgtgactaagagactttggaacccggagaatcgtttaaga
catgacgatctgagtatcaacctgggatacgcgtttgttccacaactggcgaagaaggtt
tccgtgtcatatgaaaagatttgcggtaagttgaaaaacgattttgtcatagaggaaaag
atggatggtgaaaggattcaagtgcattacatggatttcggcgggagcgtgaaattccta
agcagacgtggaatcgatttctcatatctttatggggagagtataagtgaagggcctgta
gctcagtacttgaagttcaatccaaatgtcaaagactgcgttttggattgtgagatgata
acttatgatacagacagaggtgttgttttgccgtttggtttagtcaaaagtagtgcaaga
caagctctcagcatggaaggcatctgcactcaaggttatcgccctatgttaatggtcctg
gatcttgtctatctgaatggcgtctctttgattaagttacctttgcatcagcgaaaagaa
tatttggtcaaaattttgacgccgtttccgcatgccgtggatatcttatcatatgttcgc
tgctctgatcagatcgccatcaaaagatctcttgaaagagccatatccatgggatctgaa
gggattgtgctgaagaacttcaactctcgatacgaaattggggctcgaaatgataactgg
atcaaggtgaagcctgagtacttggagcaatttggagaaaatatggatttgatcatcatt
ggcagagatcccggcaagaaggattccttgatgtgcggactagcagtttatgaaaatgaa
agcgatgcggcagagataaaagcagcagaggaagctgaaatcattagtctggattctgac
agggaagaagcagacgagcccgatcacaacaaagtgatcaagaagtttatatctttttgc
ataattgctaacggaatttctcaggaagaattcaaggatattgataggagaacgaggggc
aattggacaaagtcagaagatcggctaccgccttctagtctacttgagttcggaagcaaa
atcccagaagaatggatagatccaaagaagtctctaatcatcgaagtgaaagccaggtct
ttggataatacagaaagcagcaaaaagaaattctcagctggttgcacgcttcatggaggc
tactgtaggagaatcagagatgataaagactggacgggatgttatagcttatccgaactg
tggcgggaaaggcgtcaaagatcaggtaccgccataggttccttgaataaaaaatatccc
aagaccgataaggctaggagaaagagaaatgacattttcgtggaccaagccctggagatg
gacgacgccgggctaaagtcaaatgtctttgccaatctatacttttatgtcctctccgac
tacatcgatcccgaactgaacactaggataacgaagcctcagttgaataatttgattaaa
caaaatagtggaatgctggttcagaaccttatttccaagcaccatatggagaattctttt
cgcatcatcagtggtaaacttaccggtgaatgtaaatctttgataaacagaggctacgac
atcctaagcccgcgatggatcctggactgcgtaagctacggaaagttggttaggatagag
ccaaaacattgcttcaatgtgtccgaagagctgatgaaaatagcccgagaaagggttgat
cgtttcggcgacagttttgtttctaccatctcggaacagcagctggagagcctgatcacc
tcaaatatagacagcaccccagtcacagactataaccacatggaccggagcccagagctc
agtcaggttccgattttcctgttttctggaagaatatgttatgtaccggagatgtttttc
agtgctacagagagagctgcgctactgtccaaaatcaagctctatgggggtcttgtggct
tctgagcttataaattgcaacctcattgttgtatcgatgactacgtgctcaagagatccg
ccgcttcaaaagctcagagaatctgtcgcacagctcatcgctaattttgacagccctcaa
ccgatacctcatctggtaacgtccgagtggatagacagatcgattcaggagaactgccaa
gttcctgaggaggatttctatccagcttaa
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