Terrisporobacter glycolicus: L0P85_12835
Help
Entry
L0P85_12835 CDS
T08249
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tgc
Terrisporobacter glycolicus
Pathway
tgc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0P85_12835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgc03019
]
L0P85_12835
Enzymes [BR:
tgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
L0P85_12835
Messenger RNA biogenesis [BR:
tgc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L0P85_12835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CheB_methylest
Motif
Other DBs
NCBI-ProteinID:
UPA29480
LinkDB
All DBs
Position
complement(2584820..2586040)
Genome browser
AA seq
406 aa
AA seq
DB search
MQFTDLDIIKPIQKALKEEGYIKPTPIQSKSITPLLEGRDLLGCAQTGTGKTAAFAIPII
QQIYSDKKTLKGKRTIKAVILAPTRELAIQIEENFVAYARHTNIKSLVIFGGVSQNPQVK
ALKEGVDILIATPGRMLDLYNQKLLKLNDVKHFVLDEADSMLDMGMIHDVKRIISHLPKV
RQNIFFSATMPKEISKLADSIFKNPVKVEVAPVSSTTEMVEQNIYFVSKRQKTKLLIELL
KNNPKESVLVFSRTKHGANKITKDLISSSISAAAIHGNKSQNARQLALNEFKEGKIRVLV
ATDIAARGIDIDELPFVINYDLPEVAETYVHRIGRTGRAGRSGRATAFCSMEERDLYKAI
EKLINKKIEVVENHSFVSSAEDVTVVAKRNNRGSRRPNRSNNKNKN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttacagacttagacataattaagccaatacaaaaggcactaaaagaagaagga
tatataaagccaacaccaatacaatcaaaatcaataacaccattattagaaggtagagat
ttgttaggatgtgcacagactggtacgggtaaaacagcagcttttgcaattcctataata
caacaaatatatagtgataaaaaaacactaaaaggcaaaagaactataaaagcagtaata
ctagcacctacaagagaactagcaatacaaatagaagagaactttgtggcttatgcaaga
catacaaatataaagagtttggttatatttggaggagtatctcaaaaccctcaagttaaa
gcattaaaagaaggtgtagatatattaatagctactccaggtagaatgcttgatttatac
aatcaaaaactcttgaaactaaatgatgttaagcactttgttttagatgaagctgatagt
atgttagatatgggtatgatacatgatgtaaaaagaataattagccaccttccaaaggtt
aggcaaaatatattcttctctgctactatgccaaaagaaatatcaaaattagcagattca
atatttaaaaatccagttaaggtagaagttgcgccagtatcatcaacaactgagatggtt
gaacaaaatatttattttgtaagtaaaagacaaaagaccaagttacttatagagttatta
aaaaataatccaaaagaatctgtacttgtattttccagaacaaaacatggagcaaataaa
ataacaaaagatctaatatcatcatcaataagtgcggctgcaatacatggtaataaatct
caaaatgcaagacaactagcattaaatgagtttaaagaaggtaaaattagagtattggta
gcaactgatatagcagcaagaggaattgatattgatgaactaccatttgtaataaattat
gacttgccagaagttgcagagacttatgttcataggatcggaagaacaggaagagcggga
agaagtggtagagcaacagcattttgttcaatggaagaaagagatctttataaggctata
gaaaaacttataaataaaaagattgaagttgtagaaaatcatagttttgtttctagtgca
gaggatgtaactgtagtagctaaaagaaataataggggcagtagaagacctaatagaagt
aacaataaaaataaaaattaa
DBGET
integrated database retrieval system
