Theropithecus gelada (gelada): 112610967
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Entry
112610967 CDS
T08041
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112610967 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tge03400
]
112610967 (LIG4)
Enzymes [BR:
tge01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112610967 (LIG4)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112610967 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
112610967
NCBI-ProteinID:
XP_025220419
Ensembl:
ENSTGEG00000013318
LinkDB
All DBs
Position
17:complement(47088886..47100108)
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AA seq
923 aa
AA seq
DB search
MAIPQETIKISFYSWDSLVHRGNGACRRPDLCSTLERIQKSRGRAEKIRHFREFLDSWRK
FHDALHKNQKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFALIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIK
KSLLQLITQSSALEQKWLIRMIIKDLKLGISQQTILSVFHNDAVELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASPTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGIK
FDIKRMVEDSDLQTCYCVFDVLMLNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVG
GYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIREDK
EWHECMTLDDLEQLRGKASGKLASKHLFVGGDDGPQEKKRKAAPKMKKVIGIIEHLKAPN
LTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPDTYCVIAGSKNIR
VKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVD
TDLNQLKEVFSGIKNSYEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDLYVVIND
LSTKTEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDRCELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcccgcaggaaaccatcaagatctcattttacagctgggattccctggttcac
agaggtaacggagcttgccggagaccagatttgtgttcaactttagaacgaatacagaaa
agtagaggacgtgcagaaaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccaaaaagatgtcacagactctttttatccagcaatg
agactaattcttcctcagctagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagctttatattgagttgcttaatttacctagagatggaaaagatgccctcaaa
cttttaaactacagaacacccactggaactcatggagatgctggagactttgcattgatt
gcatattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcagttgccagcaataattctgctaaaagaaaagacctgataaaa
aagagccttcttcaacttataactcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtattagtcagcaaactatcttatctgtttttcat
aatgatgctgttgagttgcataatgtcactacagatctggaaaaagtctgtaggcaactg
catgatccttctgtaggactcagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcagatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggtgaacgtatgcaaatgcacaaagatggagatgtatat
aaatacttctcccgaaatggatataactatactgatcagtttggtgcttctcctactgaa
ggttctcttaccccattcattcataatgcattcaaaacagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaatacacaaactttcatgcaaaagggaattaag
tttgatattaaaagaatggtagaagattctgatctgcaaacttgttattgtgtttttgat
gtattgatgcttaataataaaaaactagggcatgagactctgagaaagaggtatgaaatt
cttagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaagct
catactaagaatgaagtaattgatgcactgaatgaagcaatagataaaagagaagaggga
atcatgataaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcactggactaatggatgaattggacattttaattgttgga
ggatattggggtaaaggatcacggggtggaatgatgtctcattttttgtgtgcagtagca
gagaagccccctcctggtgagaagccatctgtgtttcatactctctctcgtgttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagcct
tttcataaaaaagctccaccaagtagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagattgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgagaagataagagaagacaaa
gagtggcatgagtgcatgaccctggacgacctagaacaacttagggggaaagcatctggt
aagctcgcatctaaacacctttttgtaggtggtgatgatggaccacaagaaaaaaagcga
aaagctgctccaaagatgaagaaagttattggaattattgagcacttaaaagcacctaac
cttactaacgttaacaaaatttctaatatatttgaagatgtggagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaacttggtggttat
atagtgcaaaatccaggcccagacacatactgtgtaattgcagggtctaagaacatcaga
gtgaaaaacataattttgtcaaataaacatgatgttgtcaagcctgcatggcttttagaa
tgttttaagaccaaaagctttgtgccatggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttatttcgttgat
acagacttgaaccaactgaaggaagtattctcaggaattaaaaattcttacgagcagact
cctgaagaaatggcttctttgattgctgatttagaatatcgatattcctgggattgctct
cctctcagtatgtttcgacgccacaccgtttatttggacttgtatgttgttattaatgac
ctgagtaccaaaactgaggggacaaggttagctattaaagccttggagcttcggtttcat
ggagcaaaggtagtttcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacttttaagagaaagtttaaaatc
ctaaaagaaagttgggtaactgattcaatagataggtgtgaattacaagaagaaaaccag
tatttgatttaa
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integrated database retrieval system