Thalassovita gelatinovora: HFZ77_08250
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Entry
HFZ77_08250 CDS
T06533
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tgl
Thalassovita gelatinovora
Pathway
tgl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFZ77_08250 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgl03400
]
HFZ77_08250 (uvrB)
DNA repair and recombination proteins [BR:
tgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFZ77_08250 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HFZ77_08250 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
AAA
eIF3_p135
AAA_16
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QIZ80469
LinkDB
All DBs
Position
1683503..1685701
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKSAPLLHAPAPDVKSRDKLEGGKRFVMHTDFSPAGDQPTAIAELTSGVNAGDR
DQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYY
DYYQPEAYVARSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLVAGNEYDQRQIITDLVAQQYRRNDVGFQRGSFRVRGDVLEIWPAHLDDRAWK
LSFFGEELETITEFDPLTGAKTDTFDRIRIYANSHYVTPKPTMQQAIQGIKKELRQRLDQ
LVGEAKLLEAQRLEQRTNFDLEMLEATGVCSGIENYSRYLTGRAPGEPPPTLFEFIPDEA
IVFADESHVSVPQIGGMYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVS
ATPASWELEQTGGVFTEQVIRPTGLLDPVIEIRPVDMQVDDLLDEVRKVAADGMRTLVTT
LTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERALGETERRRT
KQIAYNEEHGITPATVKKNVEDILAGLYKGDTDQSRITAKIDKPMHGANLEAHLDGLRVE
MRKAAENLEFEEAARLRDEIKRLEAVDLVVSDDPLARQSAVEDAVEAAGAARGRSTAGRP
GQRGGVKKRRGK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccctatgcccattccgacaaatccgccccgctgctgcacgccccggccccggatgtg
aagtcccgcgacaagctggaaggcggtaaacggttcgtgatgcataccgatttcagcccc
gccggggatcagccgacggcgattgccgaactgacctcgggggtcaatgccggggatcgc
gatcaggtcctgttgggtgccactgggaccggtaagaccttcaccatggccaaggtgatc
gaggaaacccaaagacccgcgatcattctggccccgaacaagacgctggcggcgcaatta
tatggggaattcaagggcttcttcccagacaacgcggtggaatacttcgtatcctattac
gactattaccaacccgaagcctatgtggcgcggtccgatactttcatcgaaaaggaatct
cagatcaacgaacagatcgaccggatgcgccattcggccacacgggcgctgctggaacgc
gatgacgtgatcatcgtcgcctcggtgtcgtgcatctatggcatcggatcggtggaaacc
tatggcgcgatgacccaggacctagtcgcgggcaatgaatatgatcagcgtcagatcatc
accgatctggtcgcccagcaataccgccgcaacgatgtcggtttccagcgcggcagcttc
cgggtgcgcggtgatgttctggaaatctggcccgcccacctggatgaccgggcctggaaa
ttgtcgttttttggcgaagaattggaaacgatcaccgaattcgacccgctgaccggggcc
aagaccgacacgttcgaccgcatccggatttatgcgaattcacattacgtgacgccgaaa
ccgacgatgcaacaggcgattcaaggcatcaagaaggaactgcgccaacggctggaccaa
ctggtgggcgaagccaagctgctggaagcacagcgattggaacaacgcaccaatttcgat
ctggaaatgctggaagccaccggggtttgcagcgggatcgaaaactattcgcgttatctg
accgggcgcgcgccgggggaaccgccgcccaccctgttcgaattcatccccgacgaagcg
atcgttttcgccgacgaatcccatgtgtccgtgccgcagatcggtggcatgtacaaaggt
gacttccgacgcaagatgacgctggccgaacatgggttccggttaccatcctgcatggac
aaccggcccctcaagttcgaagaatgggacgcgatgcgaccgcaatcggtgttcgtttcg
gccactccggcgtcgtgggagttggaacaaaccggcggcgtgttcaccgaacaggtgatc
cgaccgaccgggctgttggacccggtgatcgaaatccgtcccgtcgatatgcaggtggat
gacctgctggacgaggtgcgcaaagtggccgccgacggcatgcgcaccttggtgacgacc
ctgaccaagcgtatggctgaagacctgaccgaatacatgcatgaacagggcatccgggta
cgttacatgcacagcgacatcgatacgatcgagcggatcgagatcctgcgcgacctgcgg
cttggcgccttcgacgtgctgatcggaatcaacctgttgcgcgaaggactggatattccc
gaatgtggtctggtcgccattctggacgccgacaaggaaggcttcctgcgctcggaaacg
tcgctggtgcagaccatcggccgggcggcgcgtaatgccgaaggccgggtgatcatgtat
gccgaccggatcaccggatcgatggaacgggccttgggcgaaaccgaacggcggcggacc
aagcagatcgcctataacgaagaacacggcattaccccggccacggtgaagaagaatgtc
gaggatattctggcagggctctacaagggcgataccgatcagtcacggatcacggccaag
atcgacaagccgatgcacggtgccaatctcgaggcgcatttggacgggctgcgggtggaa
atgcgcaaggccgccgagaacctggaatttgaagaagccgcccggctgcgcgacgaaatc
aagcggctggaagcggtcgatctggtggtgtccgacgatcccttggcgcggcaatcggcg
gtcgaggacgcggtcgaggcggccggcgccgcgcgcgggcgctcaaccgcgggacggccg
gggcaacggggtggtgtgaagaagcggagggggaaatag
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