Thalassovita gelatinovora: HFZ77_15880
Help
Entry
HFZ77_15880 CDS
T06533
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tgl
Thalassovita gelatinovora
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgl02000
]
HFZ77_15880
Transporters [BR:
tgl02000
]
Other transporters
Pores ion channels [TC:
1
]
HFZ77_15880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
Motif
Other DBs
NCBI-ProteinID:
QIZ81853
LinkDB
All DBs
Position
complement(3249711..3251690)
Genome browser
AA seq
659 aa
AA seq
DB search
MRLSSLFLTTAPFAIAAVLGLVVAQSVADVIEDSSELSIRNSLDDHGLVWAEVHANGLQV
FLSGMAPSEAQRFKALSTAGGVVDAARVIDAMKVVDSASIKPPRFSIEILRNDSGISLIG
LVPTEMDREKLVANVKSIAGSAPVSDLLQTADYDTPESWVDSVDYAIKALRKLPRSKISV
EAGAITVHAMTDSADAKRSLERDLSRSAGHDLKLALDISAPRPVITPFTLRFLIEDGTAR
FDACSASDAKGQKRILAAAQTAGLQGEATCTIGLGVPSPRWAEAVELAIAAVAELGGGSV
TFADADITLAAPEGTNQALFDRVVGELENSLPDLFALHPALPKPKTVESGGTPEFTATLS
PEGQVQLRGRLSDELSRSATDSYAKARFGSDSVYVAARLDDTLPGSWPMRVLAGLEALSH
LSNGVATVTPDMIAISGKTGKPDASAEISRLLVDKLGENTQFDIHVEYLEKLDPVASIPT
PEECEFEISEILKTRKINFEPGSDTPDADAQGVLNDIAEILKLCGEIRMEVGGHTDSQGR
ESMNEALSQLRAQAVLNALRERRVLTSTFAARGYGESMPVASNETEEGRDANRRIEFKLI
RPEPTAIETETTLEIIASEAAENNDGNAVEEETGDTTTDAPEDEAAIEAGAAEEGTQNE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtcttcgctttttcttaccaccgcgccgtttgcaattgccgcagttctagga
ctggtggtcgcccaaagcgtggccgacgtgatcgaagacagttccgagctttccatacgc
aatagtttggatgatcacgggctggtttgggccgaagttcacgccaatgggctgcaagtg
ttcctttccggtatggccccgtccgaagcgcagcggttcaaagcgctttccaccgccggc
ggtgtagtcgacgcagcgcgtgtgatcgacgcaatgaaagtggtcgacagcgcctcgatc
aaaccgccacggttttccatcgaaatcctgcgcaatgacagcggcatttccctgatcggc
ctggtcccgacggaaatggaccgcgaaaagctggttgccaatgtcaagtcgattgccgga
agcgccccggtttcggacctgttgcagaccgccgattacgacacccctgaaagttgggtc
gacagcgtcgattatgcgatcaaggcactgcggaagctgccacgttcgaagatttctgtc
gaagccggtgccatcaccgtgcacgccatgaccgatagcgccgacgccaagcgcagcctg
gaacgcgacctgtcgcgctcggccggtcacgacttgaaactggcgctggatatttccgca
ccacgtccggtgatcacccccttcaccctgcggttcctgatagaagacggaaccgcccgc
tttgatgcctgttcagcgtcggatgcaaagggtcagaaacgtattctggccgctgcgcaa
accgccgggttgcaaggcgaggccacctgtaccattggtctgggcgttccttcgccacgc
tgggccgaagcggttgaactagcaattgcggcggtggccgaactggggggcggatctgtt
acatttgcggatgccgatatcacccttgccgcgccggaaggtaccaatcaggcactgttt
gatcgggtggttggggaattggaaaattccctacccgatctgttcgcactgcacccggca
ttgcccaaacccaaaacggtcgaaagcggcggaactccggagttcaccgccaccctgtcg
cccgaaggtcaagtacaattgcgcgggcggctgagcgatgaactctcccgctctgccact
gacagctatgccaaggcgcggttcggatcggattcagtctatgtcgccgcgcggctggat
gacactttaccgggcagttggccgatgcgggtgctggccgggttggaagccctgtcgcat
ttgtccaacggcgtcgccacggtgacacccgacatgatcgcgatttccggcaagaccggc
aaacctgatgccagcgccgaaatttcccgcctgctggtcgacaagctgggcgaaaatacg
caattcgacatccatgtcgaatatctggaaaagcttgatcccgtcgcgtcgatcccgacg
cccgaggaatgcgaattcgagattagcgaaatcctgaaaacccggaaaatcaatttcgaa
cctggttcggacacgcctgatgcagacgcgcagggggtgttgaatgacattgccgaaatc
ctgaaactatgcggcgaaatccgcatggaagtcggggggcataccgacagtcagggccgc
gaaagcatgaacgaagcgcttagtcagttacgggcgcaagccgtgctgaatgcgctgcgc
gaacggcgggttctgacttcgaccttcgcggccaggggctatggcgaatccatgccggtg
gccagcaatgaaaccgaagaaggtcgcgacgccaaccgccggatcgaattcaagctgatc
cgccccgaaccgacagcgatcgaaaccgaaaccacgcttgaaatcatcgccagtgaagcc
gccgaaaacaacgacggcaacgctgttgaagaagaaaccggtgacaccaccacggacgcc
cccgaggatgaagccgccatcgaggccggggcagccgaagaaggaacccagaatgaatag
DBGET
integrated database retrieval system
