KEGG   Toxoplasma gondii: TGME49_224580
Entry
TGME49_224580     CDS       T01093                                 
Name
(RefSeq) RNA recognition motif-containing protein
  KO
K12831  splicing factor 3B subunit 4
Organism
tgo  Toxoplasma gondii
Pathway
tgo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TGME49_224580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tgo03041]
    TGME49_224580
Spliceosome [BR:tgo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TGME49_224580
 Complex B
    TGME49_224580
 Complex C
   U2 SnRNP specific factors
    TGME49_224580
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 7897619
NCBI-ProteinID: XP_018635948
UniProt: S8EX69
LinkDB
Position
X:complement(join(2962947..2963521,2963984..2964292,2964913..2965053,2965605..2965761,2965879..2965977,2966700..2966827,2967643..2967853))
AA seq 539 aa
MLAVGGGGHRSFTGGGADITQVYERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSV
PRDKLTGNHQGYGFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRNFDVGANVFL
GNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQ
FICNRPIHVSYAYKKDTRGERHGSAAERLLAANRPQIINPNAPATGGVKPPISLAMQSGT
QGQGTGGVIPGGGGLSSVPPPPLLGAMPPRGPPGAQGFPQSFGPHRGGSGPGVGPSGPPG
GAPGSASTGPGGRMGELPPLPLPPNMAGGMPNLPMGLPPPPLLFMPRPGMPPFPPMPNMS
PVSQGAGMGPPGSSPQGPPGLGGPPSSQGMPPSRAPGIPTITPLRTPGSAMGPLGPESPS
GPGAGGSGAPRPSPGGIPPPGGVSPVRPDLLPPPPLILSAGGPGSGSHASRGPAVFSPSP
NMRPPMGPHGGALLGPPPGASPNMRSPMPGLMGRGPAAGGPPPLIPQGGQQPNRPPMMG
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgctggctgtaggagggggcggtcaccgctcctttaccggcggaggcgcagacatcact
caggtctacgagagaaatcaggatgccaccttgtacatcggcaatctcgactcccaggtc
gacgacgaccttctgtgggagcttttcgtccagtgcggccccgttcgtacggtgtccgta
cctcgagataagttgacgggcaatcaccagggttacggcttcgtggagtttagaaacgag
gtcgatgcggactacgccctgaaactgatgaacatggtcaagctgtatggaaaggcgctc
cgcctcaacaagtctgcccaagacaggaggaacttcgatgtcggcgccaacgtctttctg
ggaaaccttgatccggacgtggatgagaagacgatttatgataccttttcagcttttgga
aacatcatctccgcgaagatcatgcgagaccccgagactggtctttcgcgaggctttgga
tttgtttccttcgatacctttgaggcatccgacgcagccttggcagcaatgaacggacag
ttcatatgcaatcggcccatccacgtttcttacgcctacaaaaaagatacgcgaggcgaa
cgccacggctccgcagctgagcgtcttctggcagcgaatcggccacaaatcatcaatcca
aatgcgcctgcgacgggtggggtgaagcccccgatcagtcttgcgatgcagtccggcact
cagggtcaaggaacaggaggtgtcatacctggaggaggcggtctctcgtcagttccaccg
ccgcctctgcttggagccatgccacctcgagggcccccgggcgcccaaggcttcccccag
tccttcgggcctcatcggggcggctcaggcccgggagttgggcccagcgggcctcctgga
ggagcccctggaagcgcgtctacaggtcctggagggcgaatgggcgaactgcctcctctg
cctctccctccgaacatggctggggggatgccgaatcttccgatgggcctgccgcctccg
cctctcctcttcatgccgagacccggcatgccgcccttcccgccgatgcccaacatgtcg
cctgtcagccagggtgccggaatgggcccaccagggtcttcgccacaaggcccgccaggc
ctgggtgggcctccttctagccagggcatgcctccttctcgcgccccggggataccgacc
atcactcccttgcgcaccccggggagcgctatgggccctctcgggcctgaatcgccttct
gggccaggggcaggcggctcaggggcacccaggccctcgccaggtgggattccgcctcca
ggaggggtctcgccagtccgtcccgaccttctcccgccgccgccgctcattctctccgcg
gggggcccagggagcgggtcgcatgcaagtcgcgggcctgcagttttcagtccatcgccc
aacatgcggccgcccatggggccccacggcggggcccttttgggcccgccccccggcgcc
tcgcctaacatgcggtcgccgatgccgggcttgatgggcagggggccagctgcaggaggg
cccccgcctctgattccccagggtggacagcagccgaatcgcccgcccatgatggggtag

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