Toxoplasma gondii: TGME49_244000
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Entry
TGME49_244000 CDS
T01093
Name
(RefSeq) DEAD/DEAH box helicase domain-containing protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
tgo
Toxoplasma gondii
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgo03009
]
TGME49_244000
Enzymes [BR:
tgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TGME49_244000
Ribosome biogenesis [BR:
tgo03009
]
Eukaryotic type
90S particles
Helicases
TGME49_244000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
7899666
NCBI-ProteinID:
XP_002366889
UniProt:
S8GPL4
LinkDB
All DBs
Position
VI:join(2936518..2937063,2937884..2938002,2938307..2938467,2939022..2939170,2940006..2940213,2940836..2941260,2941716..2941795,2942230..2942518,2943412..2943736,2944048..2944325,2944735..2944816,2945256..2945584)
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AA seq
996 aa
AA seq
DB search
MAKERLIRGGGSASRGVGKKRKEFQKRAPSGKLRQKEQQEIRELEDRICVEMPLPGLTWE
PPFLHSSASSASAASAASSSSSASSASSSEGVVEEGAMARAAGKEEGDPSVSRENAAGTP
TLSRFFFSDLPLSQYTRRGLKEGGFHLLSSIQARAIPHALRGADVLGEAKTGSGKTLCFV
IPVLECLYRNCVSSIDGLAALILAPTRELAVQIFDVIKLVGRHHEFSAGCLIGGKSVQAE
AQRVNALNIVVGTPGRVLQHMEESQLWEANGLKILVIDEADRMVDLGFFETSRLIINQLP
PERQSLLFSATLKSAVKRLAALAASTDAECISVDPGVSATPVSLRQNYVVVPAQHKLSAL
FSFLRTHSSKKILVFVSSCKQTRFLYEAFRILKPGLALMYLHGRQKQQKRLEVFQSFVDR
TGECCLISTDLASRGIDFTQLSLFETSKQRSGPRGFGKRRGRREGETNGVETTYKKGARE
AETRGVDFVVQLDCPDSVETYIHRVGRTARMQRTGQALLMILPSETKFVDRLRDKKIEMQ
QLFMNPKKAVRVENKLQSILAQNTALKLLAQQALSSYLRCVALMPDKSVFSLPTDKKALT
ALANAYGLSLPPNVTLLADEKTKNRESQDGDEDELCTGGAVAVTEMKKKKNLSKLERFKE
KIRQKKAEKAARQHAQRMETETEATETEKEEKEKQEKKEVRKKREETERTLTLLQEREQN
EDEEGGEEAAANLDDDGLLVLKDREDDADLDEKERGRLLHEQLMRKPGFRRERLRFRADG
TAKVKGLAAASLHQSHVFFGDEEDEGDSGDEGDSGDEGDRGDEEERRGEEGEGDLPSASG
RAAFLRRMREKVMAAQQEDKERNRQRIQELHTKQRQKARARRQAQAAEQGTAPHALLDLR
SLPGDEEEGSAGERGDSEEEATESDRRLPTSSSESESEMQSGKRQPKRRAREERATGRGS
KRQRSNRSSTDDTDNKVEEQDLEALALQVLQGKNVA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagaggctgatacgcgggggcggctctgcctcgcgcggcgtcggcaaaaaa
agaaaagaattccaaaagcgagcaccatcaggcaagctccgccagaaagaacaacaggag
atccgtgaactggaagatcgaatctgcgtcgaaatgcctctccctggcctcacatgggaa
ccccctttcctccactcttctgcttcctctgcttccgctgcttccgctgcttcttcttct
tcctctgcttcttctgcttcttcttctgaaggcgtcgttgaggagggagccatggctcga
gcggcagggaaagaagaaggcgacccttctgtctcgcgcgaaaacgctgcagggacaccg
accttgtctcgcttctttttctcggatcttccgctcagtcagtacacgcgacgaggcctg
aaggaggggggcttccacctgctgagctccatccaggcccgggcgattccccatgcgctc
cgaggcgccgacgtcctcggcgaagcgaaaaccggcagcggcaaaacgctctgtttcgtc
attcctgttctcgagtgtctgtacagaaactgcgtgagcagcatcgacggcttggcggct
ctcatcctcgcgcccacacgagagctcgccgtgcagatcttcgatgttatcaaactcgta
ggccggcatcacgaattctcggcgggatgtttgatcggagggaagagtgtacaagctgag
gctcagcgcgtaaatgctttgaacatcgtcgtcggtactcccggtcgtgttcttcaacat
atggaagagtcgcagctgtgggaggcgaatggcctaaaaatcttagtgattgatgaagca
gatcggatggtcgatttgggattcttcgaaacgtctcgcctcatcattaatcaactgcct
cccgaaagacagtcgctgctcttctccgcgactctgaaaagcgcagtgaaacgtctcgcc
gctctcgctgcttcgacggacgcagagtgcatctccgtcgatcctggcgtgagcgcgact
ccggtgtcgctacggcagaactacgtggtggtgcctgcgcagcacaaactcagcgctctt
ttctcttttttgcgaacgcattcttccaagaagattctggtcttcgtctcaagctgcaaa
cagacccgctttctgtacgaagcgttccgcatcctcaagcctggtttggcgctcatgtat
ctgcacggtcggcagaagcagcagaagcgtctggaagtcttccagtccttcgtagatcgc
acaggagagtgctgcctcatcagcacagatctcgcgtctcgcggaatcgacttcacgcag
ctctctctgtttgagacgagcaaacagcgatctggtccgcggggctttggaaagcgacgg
ggacgccgcgaaggagaaacgaacggcgtagagacaacatacaagaaaggcgcgcgagaa
gccgagactcgcggcgtcgacttcgtcgtccagctcgactgtccagacagcgtagagacg
tacatccatcgagtcggaagaactgcgagaatgcagcgaacaggtcaagctctcctcatg
attctcccttcagaaacgaaattcgtagacagactccgtgacaaaaagatcgagatgcag
cagctcttcatgaatccaaagaaggccgtccgtgttgaaaacaagctgcagtcgatcctt
gcgcaaaacaccgccctcaaattgcttgcacaacaagcactgtcgagctacctgcgttgt
gtcgcattgatgcccgacaagagcgtcttctcgcttccaacggataagaaggccctgact
gctttggcgaacgcgtacggactctctctgcctccaaatgtcactcttctcgctgacgag
aagacgaaaaaccgtgagagtcaggacggcgacgaagacgaactctgcacaggaggagca
gtcgccgtgacggagatgaagaagaaaaagaatttgtcgaaactcgagcgattcaaggag
aaaatccgacaaaagaaggcagagaaagcggctagacagcacgctcaaaggatggagacc
gagacagaagcgacagaaacagagaaagaggagaaagagaagcaggagaagaaggaagtg
aggaagaagagagaagagaccgagaggacgctgacgttgttgcaagagagagaacagaac
gaggatgaagagggcggagaggaggcggctgcgaacttagatgacgacggcctcctcgtt
ctgaaggacagagaagatgatgcagatctcgacgaaaaagaaagaggacgcttgctccac
gaacaactcatgaggaaaccaggtttcagacgagaaaggcttcgcttccgagcagatggc
acagcgaaagtgaagggccttgctgctgcctctctgcatcaaagccatgttttctttgga
gacgaagaagacgaaggagacagcggagacgaaggagacagcggagacgaaggagacaga
ggagacgaagaagagaggcgaggtgaagagggagaaggagacttaccgtcggcgtctggt
cgcgccgcgttccttcggaggatgcgagagaaagttatggcggcacaacaggaagacaag
gagagaaatcgacagagaattcaagagcttcacacgaaacagagacagaaggcccgcgct
cggcgccaggctcaggctgcagagcaaggtactgctcctcacgctctgttggacctgcgc
agtttgccgggggacgaagaggaaggaagcgcgggagagcgaggagacagcgaggaggaa
gctacggagtctgacagaagacttccaacctcgtcttctgaaagtgaatcagaaatgcag
agtggaaagcgacagccgaaacgacgcgcgagagaagaacgcgcaacgggaagaggaagc
aaacggcaacgaagcaacagatcctcgactgacgacacagacaacaaagttgaagaacaa
gatttggaggccctcgctctgcaggttttacaggggaagaacgtcgcttaa
DBGET
integrated database retrieval system
