KEGG   Toxoplasma gondii: TGME49_293460
Entry
TGME49_293460     CDS       T01093                                 
Name
(RefSeq) ATP-dependent DNA ligase domain-containing protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
tgo  Toxoplasma gondii
Pathway
tgo03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    TGME49_293460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tgo03400]
    TGME49_293460
Enzymes [BR:tgo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TGME49_293460
DNA repair and recombination proteins [BR:tgo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     TGME49_293460
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT PTCB-BRCT SR-25
Other DBs
NCBI-GeneID: 7900006
NCBI-ProteinID: XP_018638624
UniProt: A0A125YQT5
LinkDB
Position
Ia:join(333243..333367,333957..334101,334615..334788,335276..335500,335918..336159,336963..337457,338340..338462,339705..339905,340372..340480,341084..341182,341928..342055,342805..342976,343606..344894,345328..345615,346099..346441)
AA seq 1385 aa
MMVAFPSSRNSGPSCEDILFADVCTVLDRLADPFAKAAEKMKFFARYLHRFSHLPISSLY
PLLRLLLPQLDRRRPPAQLKQPLLARIYAQVFALPPAAAARLKLYKDPAAATASAGGRPL
AARAGDFASCVAASVQERAGRRQPSVTVKELNRELDLVALAGTYSEKSVILHGLLPQLTV
NEHKWCMRILMKEVKMGGLSGERLLTLLHTDARKIVNQVSDLKSTLEVIDEEKAEAVHAK
RGGSAGGEEGVERDGPFGEKRDSLRLLFQPLRPMLARVVRPVAADIAAVLFGEGGKGKHG
TDSCPRPAPTNAPVSRVYFVERKYDGERLLVHIDKHASSGPVVRLLTRRGCDYTPLYGGD
FHHRSPSFSSSSSSSSASAFSSSASSSSASSSGFRWPKRERFPSEDEVRGETGDRETRGG
KRTRKEPEGLAGLAATLVEALRGSQAILDGELLAWDDDLESFLPFGTNKSVAAAETARCH
LSYVIFDVLYYRNSEGDEYSLLNMKLQDRKVLLERILRLSGNRLMLAPFTPACRPSEIVS
ALNSAIENRHEGLVVKDAASFYRLHSRKAEEKMQSRPRGGWFKLKPHLGSLPDTLDLIAI
GAFFAEGQRRREVNSSHLIDHCSHFLLGVLEGDGGPEAKCVKSFCKVGTGFSLETLREIR
DYLRLHCCRFQATQPPPWFDASTGSATSRLDVTWPPSCSFVMEVKGAELSQGKEFDMGAT
LRFPVAVRPFRRDKAWHEAMSETALLEFFAVAEECGGRLLSQPSSPSGAVATAPDRSLAG
SSTERRHALGLFYRHSGETASEESDSADEGLGAGSNTDLANVPAAAGEGNHGCSPKERPQ
KALLSSPSRLHVKPASGFSRMALLAPFRAADTSAIQPCSSALKGTDIWVLAGDEEAFPKA
SLEALVAHLGGKVSQTLSPSVTHIVADRPSFRTRTVAAAVAQLATQQRDFHSTLSEKRKR
RLSSLRSLPSRSSPFSSSSSPSCPSSSRLSSLSSAPSSSQHISVRVPPVLHFRWLLECAE
REEAVPLRPSLVIHGTPDTERLFSRHFDVFGDAFLEDETPTERGLGRLSAILAHAVEVAE
SQKERRAREGVRADACRERGEATVCEEREPRKSGAVRRGREETDGMLAREAEEEHLFDIS
DTEANAVRRELEAFLKNNPDSRETPARAGNSLEPLKMRLYVAPDDLAWRSLSLQQLKKLQ
NDDLETSTSSDCTAPSSPPLTVIRYSPFQQSSCAVSPSCYSSTLSSCDKLLHILASAYRA
SLVAQCCHRGARLVNTPAAATHVLLRFSAPLDVESGAMDSEGTREEPEHDEGKNGKNQEE
RGKEKTGTENETDAEQDGRGNKFRRDHQASRGPQLITADVLELMLRQKGPGKWKEDDADP
VQTSA
NT seq 4158 nt   +upstreamnt  +downstreamnt
atgatggtggctttcccctccagccgcaactccggcccttcttgcgaggacattctcttt
gcggacgtatgcactgtcctcgatcgattggctgatccgtttgcaaaggcagctgagaaa
atgaagttctttgctcgctacttgcaccgcttctcgcatcttccaatttcttcactctac
cctctccttcgtctcctcttacctcaacttgatcgtcgccgtccccctgcgcagctgaaa
cagcctcttctcgcgcgtatatatgcccaagtgtttgcacttcctccggctgctgcggct
cgcctcaaactctacaaagacccagcagcggcaaccgcgtcagcaggcggaaggccgctg
gcggcgagagcgggagactttgcgagttgcgtcgctgcgtctgtccaggagagagctggc
cgaaggcagccaagtgtcacagtgaaagagctgaatcgcgaactcgacctcgttgcgttg
gcagggacctattcagagaaatctgtcattttgcatggccttcttccgcagctgacggtg
aatgagcacaagtggtgcatgcgcattttgatgaaggaagtgaagatgggcgggttgagt
ggagagcgcctcctcacgctcttgcatacagatgccagaaaaatcgtcaaccaggtctcg
gatctgaaaagcacactcgaggtcatcgacgaagagaaagctgaggcggtgcacgcaaag
cgaggaggctccgcgggcggtgaggagggagtcgagagggacggcccttttggagaaaag
cgagactctctgcgtctgctctttcaacccctaagacccatgctcgcgcgagtcgtccgg
ccggtcgctgccgacatcgccgcggttctcttcggcgagggcgggaaaggcaaacacggc
acggacagctgccctcggccagctcccacaaacgctcctgtctctcgcgtctacttcgtc
gagaggaaatacgatggggaaagactcctcgtgcatatcgacaaacacgcttcctcgggt
cctgtcgttcgtctcttgacccgtcgaggatgtgattacacacctctctatggtggagac
ttccatcatcgatctccttccttttcttcttcctcttcttcttcctctgcatctgctttc
tcttcttccgcttcctcttcttccgcttcgtcttcgggattccggtggccaaagcgtgag
cgcttcccttctgaagacgaggtacgcggcgagacaggcgacagagaaactagaggagga
aagcggacgcgcaaagagcccgagggcctcgcgggcctcgcggcgaccctcgtggaggct
ttgcgaggttcgcaggcgattctggacggcgagttgcttgcgtgggatgacgatcttgag
agttttctacccttcggcacgaacaaaagcgttgcagcagcggagacggcgcgctgtcat
ttgtcttacgtgatctttgacgttctgtactaccggaattcggagggcgacgagtactcg
cttctgaacatgaagcttcaagacagaaaagtgctcctcgagcggattctgaggctctct
gggaaccggctgatgctcgcgccgtttactcctgcgtgtcgtcccagtgaaattgtctcc
gcgctcaactcagcgattgagaaccgacatgaaggtctcgtcgtgaaagacgcagcgtct
ttctatcgcctccactccaggaaagcagaagagaaaatgcaatcacgcccacgcggcggc
tggttcaagttgaagcctcacctaggcagtctgccagacacgctggacctcatcgccatc
ggcgctttcttcgctgagggacagagacgacgggaagtgaactcttctcatctcatcgac
cactgttcccactttcttctcggcgtcttggagggcgacggcggccctgaagctaaatgt
gtgaagtctttctgcaaggtcggcactggcttttcgctcgaaactctgcgagaaattcgg
gactatctgcggctccactgttgtcgcttccaagcgacgcagccgccgccgtggttcgac
gcatccacaggcagtgccacctcgcgactcgatgtcacgtggccgccgtcgtgcagtttt
gtgatggaagtgaaaggcgcagaactttctcaaggaaaagagttcgacatgggagcgact
cttcgctttcctgtcgctgttcggccgttccgcagagacaaggcttggcacgaagccatg
tcggagacggcgctgcttgagttttttgctgtcgcagaagagtgtggcgggcgcctgctg
tctcagccgtcctcgccctcaggggccgttgctacggctccagacagaagcctggcgggg
tcgtcgacagagcgacgacacgcgttaggattgttttaccggcactctggcgaaactgca
tctgaggaaagcgactctgcagacgaagggctgggcgcaggcagcaacactgacttggcg
aatgttccagcagctgctggggaaggcaatcatggttgttcgccgaaggaaagacctcag
aaggcgttgctttcttcgccaagtcggctccacgtaaaacctgcttcgggcttctcgcgt
atggctctcctagcgcccttccgagcagccgacacgtctgcgattcagccatgctcctca
gcgttgaagggcacagatatctgggtcctcgcgggggacgaagaggcttttcctaaggcc
tctctggaggcgctcgtagctcatctaggcggaaaagtgtctcagaccctctccccgtct
gtcacccacatcgtcgcagatcgtccctcatttcgaacgcgaactgttgccgcagccgtc
gcccaactcgccacgcaacaaagagactttcactcaacactcagtgaaaaacgaaaacgc
aggctctcttctcttcgttcgctgccatctcgttcttctcccttctcttcttcttcctcc
ccttcttgcccctcttcttctcgtttatcttctctttcttctgctccttcatcttctcaa
catatttctgtacgtgtgcctccagtgcttcattttcgctggcttctcgagtgtgcagag
cgggaggaggcagtgcctctgcgtccgtctctggtgatccacgggacgcctgacacagag
cgtttgttttcgcgacacttcgacgtctttggagacgcgttcctcgaagatgaaacgccg
acagagcgaggcctagggcgtctctcggcgatcctcgcccatgcagtggaggtggcggag
agccagaaagagcgcagggcgagagaaggggtgagggccgacgcgtgtcgcgaacgtgga
gaggcaacggtctgtgaggagagagaacccaggaagagtggcgccgtgaggaggggtcgg
gaggagacagatggaatgctggcaagggaggccgaagaagaacaccttttcgatatttcc
gacacggaggcgaacgctgtgaggcgagagttagaagcgttcctcaaaaacaacccagac
agtcgggaaacacctgcccgagctggtaatagccttgaacccctcaaaatgcgactttat
gtggcgcctgacgatctcgcgtggcgctcgctgtctctgcagcagctgaagaaactccag
aacgatgaccttgagacatcgacgtccagtgattgcactgccccctcttctccacctttg
acggtgattcgttattctccttttcaacagtcgtcctgtgcggtttctccctcgtgttat
tcgtctacactgtcgtcgtgtgataagttacttcacatcttagcaagtgcttacagggcg
tccctggtggcgcagtgttgccatcgaggagcaaggcttgtaaacaccccggcagcagcc
acgcatgttcttctgcgcttttctgcacccctggatgtggaaagtggagctatggattcg
gaggggacacgagaagaacctgaacacgacgagggaaagaatggcaaaaatcaagaggaa
cgtggaaaagagaagacaggaactgaaaatgaaaccgatgcagagcaagatggaagaggg
aacaaattcagacgtgaccaccaagcttctcgcggtccgcagctgataactgcggacgtg
ctggaactcatgttaagacaaaaaggcccggggaagtggaaagaggatgatgcagaccct
gttcaaactagtgcataa

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