Tinamus guttatus (white-throated tinamou): 104565840
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Entry
104565840 CDS
T08560
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03250
Viral life cycle - HIV-1
tgt04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104565840 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104565840 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104565840 (SAMHD1)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104565840 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
104565840
NCBI-ProteinID:
XP_010210883
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MEVRHFLTLQQLPLRVAWRLPMLSRTRSSAQWRCRTVSDPGPPDRPLLIAAPCCLPAERL
KVLACLTQLQQQHADIMKVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYFVFP
GASHNRFEHSLGVGHLAGCLVRALKERQPELDITQRDILCVQIAGLCHDLGHGPFSHMFD
GRFIPLVRPDLKWKHESASVEMFEHLITSNKLEKVMEYYGLVLEEDMNFIKEQIGGPIDE
NTREKSWPYIGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYKRLLKFT
RVCDVNSQKLICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIVEIMITEALQKADPFFK
IEGSKGRPYRISTAMEDMEAYTKLTDHIYLEILHSSCPELAEAREILRKIERRELYKFLG
DTHPEKEKEIAKEEYSGLSAEIADSRPEKNPPLVQPKAEDFIVDIINMDYGMEEQNPIDK
VLFYCKADPTKAVRISKEQVSKLLPETFAEQVIRVYCKNQDPDTVSAAKQYFIQWCIRRD
FTKPQDCDVVAPHLTPMKKSWNNIQEDECRTAAEPSCKQRLSFDK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaggcacttcctgaccctgcagcagctacctctgcgtgtggcctggcgcctg
ccgatgctcagccggacccggagctcagcacagtggcgatgccggacagtgtccgacccc
ggtcccccggacaggccgctcctcatcgcggctccgtgctgcctcccagctgagagactg
aaggtgctggcgtgcctgacccagctgcagcagcagcacgcggacatcatgaaggttttt
aacgatccgatccacgggcacattgaaatccaccctcttctcgtgcgcatcattgacact
ccgcagttccagcgcctccgatacatcaagcagctgggtggcacctactttgtgtttcca
ggagcctctcacaaccgctttgagcactccttgggggtaggccacctagcagggtgtctg
gttcgtgcactgaaggaaagacagccagaactggatataacccaacgagacatcctctgt
gttcaaattgctggcctttgccacgatttgggccatggcccgttttcacatatgtttgat
ggaagatttattccactcgttcgcccagatttgaagtggaagcatgaaagtgcctctgtt
gagatgtttgaacacctcatcacttccaacaaactagaaaaagtaatggaatattacggt
cttgtcctggaagaagatatgaactttatcaaggaacaaataggagggcctatagatgaa
aacactcgtgagaaatcgtggccctacattggtcgaccaaaggagaaaagtttcctttat
gagatagtagcgaacaaaaaaaatggcattgatgttgacaagtgggattattttgcaagg
gattgccatcacctaggaatccagaacaattttgattataaacggttactgaaattcacg
cgggtctgtgacgtgaacagccagaagctcatctgcacccgggacaaggaagttggaaac
ttgtacgatatgttccacacacggaattgcctgcaccggcgtgcgtaccagcataaggtt
ggcaacatcgttgaaataatgattacagaggccttacaaaaagcagacccgttttttaaa
attgaaggctctaaaggaagaccctaccgaatttctacagccatggaggacatggaagcc
tacaccaagctaacggatcacatctacttggagatcctgcactccagctgtccagagctg
gctgaggcacgagaaattttgcgtaaaatcgagcgacgtgaattatacaagtttttagga
gacactcatccagaaaaggagaaggaaattgcaaaggaggaatacagtggcctgtcagca
gaaatcgccgattccagacctgagaagaatcctccgctggtgcagccaaaggctgaggac
ttcatagtggatattatcaatatggattatggaatggaagaacagaaccccattgataaa
gttctcttctactgcaaagctgatcctaccaaggcagtgaggatcagtaaagaacaggtc
tcgaagcttttacctgagacttttgcagagcaggttattcgggtttattgcaaaaatcag
gatccagatactgtttcagctgcaaaacagtattttattcagtggtgtataaggagggat
ttcactaaaccacaggattgtgatgtggttgcccctcatctaactccaatgaagaaaagc
tggaataatattcaagaggatgaatgcagaactgctgcagaacccagctgcaagcaaagg
ctgtcttttgataagtaa
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