Tinamus guttatus (white-throated tinamou): 104573114
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Entry
104573114 CDS
T08560
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104573114 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgt03041
]
104573114 (DDX46)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104573114 (DDX46)
Spliceosome [BR:
tgt03041
]
Complex A
U2 snRNP components
U2 related factors
104573114 (DDX46)
Complex B
104573114 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104573114
NCBI-ProteinID:
XP_010218600
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MFFSFVNLQTRHYRKRSASRGRSGSRSRSRSPSDKRGKRGDDRRSRSRDRDRRRERSRSR
DKRRSRSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNKKTEN
RSRSKEKTDGVEVSKEKKKEKDDKEEEKEKDAPVTTVATENFDQNKLEEEMRKRKERVEK
WREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEEAAEGEKEGSEVEDEELDPLD
AYMEEVKEEVKKFNMRSVKGGGGSDKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQ
DAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEE
VNVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNG
RDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFS
KTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLD
EADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVV
CSDVEQHVIVIEEENKFLKLLELLGLYQEKGSVIIFVDKQEHADGLLKDLMRAAYPCLSL
HGGIDQYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGR
TGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKK
SSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKD
MGTPGTSNVPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAIL
RGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDF
PQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttcatttgtgaatttgcaaaccaggcattaccggaagcgctccgcgtcgcgc
gggcgctcaggcagccgctccaggagccgctctccgtcggataaacgagggaaacgtggg
gacgaccggcgctcccggagcagggatcgggaccgcaggcgggagcgctcgcgcagcagg
gacaagagaaggtctcggtcgcgcgacaggaagcgtcaaagacgttcaagaagtagagaa
agggagcggagcagggagagaagaagatcccggagccgagagagaagacgctctagaagc
aggagtagagggagacggtctcgatcccctagtccaagcaagaacaagaaaacagagaac
agatcaagatctaaagaaaaaactgatggtgtggaagtttcaaaagaaaagaaaaaagaa
aaagatgacaaagaagaagaaaaggagaaggatgctcctgtgactactgtggccaccgag
aattttgatcagaacaaactagaggaagaaatgagaaaacgaaaagaaagagtggagaag
tggagggaagagcaacgcaagaaggctatggaaaacataggagaactgaaaaaggaaatt
gaagagatgaaacaggggaaaaaatggagtttagaagatgatgatgatgatgaagaggaa
gctgcagaaggagaaaaagaaggcagtgaggttgaagatgaagaattagaccctttggat
gcttatatggaagaagttaaagaagaggtcaagaagtttaatatgagaagcgtgaaaggt
ggaggtgggagtgataagaaatctggaccaactgttaccaaagtagtaactgtggtgaca
actaaaaaggcagctgtagaatcagaaaagaagaaaggggagctcatggagaatgaccaa
gatgcaatggagtattcctcagaagaggaggaggttgatcttcagactgccctgactggc
tatcagaccaagcagagaaagctgctggaaccggtggatcatggaaagatagaatatgag
cccttcaggaaaaacttctatgttgaagtgccagaactagctaaaatgactcaggaagag
gtgaatgtgtacagactggaattggagggaattacagtcaaaggaaagggctgccccaaa
ccaataaaaacttgggtacaatgtggtatttctatgaagattctcaccgccctcaaaaaa
catggctatgaaaagcccactcccattcaaacccaggctatcccagcaatcatgaatgga
cgtgacttgattggcattgctaaaacgggaagtggaaaaactattgcctttcttttgccc
atgtttagacacattatggatcagagggcgttagaagaaggagaaggtcctatagcggtc
attatgacacctactcgagagttggctttgcagattaccaaggagtgtaagaaattctca
aagacacttgggcttcgagttgtctgtgtgtatggaggaacaggaatcagtgaacagata
gctgaactcaaaagaggtgctgaaattattgtttgtacacctggacgtatgattgacatg
ttagcagctaacaatggtcgggtgacaaatctccgccgagtcacttatgttgtacttgat
gaggcagacagaatgtttgacatgggttttgagcctcaggtcatgcgcattgtagacaac
gtcaggcctgaccgtcagactgtcatgttctctgctacttttcccagagctatggaggcc
ttagctcggaggatcctgagtaaacccatagaagtgcaggttggaggtagaagtgttgtc
tgttctgatgtggagcaacacgttattgtcatagaagaggagaacaagtttttgaagtta
cttgaactgctgggactctatcaggagaaaggatcagttatcatatttgtagataaacaa
gaacatgctgatggtctgttaaaagatttaatgagagctgcttatccctgcttgtctctt
cacggaggtattgatcaatatgacagggacagcataattaatgatttcaagaatggaatt
tgcaaacttctggtggccacatctgtagctgcaaggggcttggacgtaaaacaattgatg
ctggtggtcaattatagctgtcccaaccattatgaggattatgtgcacagagctggccga
actggacgagctggcaataaaggatatgcatacacgttcattactgaggatcaggcacgg
tatgccggtgatatcattaaggctttggagttgtctgggaatccaattcctaccgacttg
gagaagctctgggctgacttcaaagaccagcaaaaggctgagggaaagctgattaaaaaa
agcagtggattctctggcaaaggttttaaatttgatgaaacggaacaggctttggctaat
gaacgaaagaaactacaaaaagcagctcttggcttgcaagattcagatgatgaagataca
gctgttgatattgatgaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagac
atgggcacgccaggaacatcaaatgttcctacaccatcagctggtaatgcagaaaaactg
gaaattgctaaaagattggctttgagaatcaatgctcagaagaatcttggagcagaggca
caagtatttgtccctttccacttcaaggatgtgatgcagcaggctacaaacgccatcctg
agaggaggcacaattcaagctcctactgtgtctgccaagactattgcagagcagctggct
gaaaaaatcaatgctaagctcaattatgtacccatagaaaagcaggaggaagagaaacag
gatggaggacaaaatgaatccttcaagagatatgaagaagaattggagatcaatgacttc
ccacagactgccagatggaaagttacatccaaagaagctctgcagagaatcagtgaatat
tctgaagctgctattacaatcagaggaacttacttccctccaggcaaggaacccaaggaa
ggagaacggaagatttatttggctattgagagtgccaatgaactggctgtacagaaagca
aaggcagaaatcacacgacttataaaagaggaacttatcagattgcaaaattcataccaa
ccaaccaacaaaggaagatacaaagttctataa
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integrated database retrieval system
