Tinamus guttatus (white-throated tinamou): 104574827
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Entry
104574827 CDS
T08560
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104574827 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104574827 (LIG4)
Enzymes [BR:
tgt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104574827 (LIG4)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104574827 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
mRNA_cap_enzyme
SKA1
Motif
Other DBs
NCBI-GeneID:
104574827
NCBI-ProteinID:
XP_010220443
UniProt:
A0A099YWB0
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MASTPASQPSAKKTVASQVPFAHLCCTLERMQTCKSRPEKTKYFKDFLNSWRRFHEALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGRDAAKLLNYRTP
AGSRGDAGDFALIAYFVLKPRCPRQGRLTIEQVNELLDAIANNNSAKNKGLLKKSLLQLI
TQSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRELHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGASPLEGSLTPFIHKAFKSNVQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EESDLQTCYCVFDVLMVNNQKLGHETLSKRYEILSDIFTPVAGRIHAVHKTSARTRKEVI
DALNEAIDNREEGIMVKDPTSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAETPPPNEKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYRRKDPP
CNILCGTEKPEVYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIERIREDKEWYECMT
SDILEHLRSKAEGKLASKHLHIDDDDEPQEKKKKTVPKVKKIIGIAEQFKAPDLSNINKV
SNVFEDVEFCVMTGTARHSKSELESRIAECGGSVVQNPRPDTYCVIVGTENVRVRNIIAS
NKYDVVKAEWLLQCFQAKMLVPWQPAFMIHMCPDTKEHFAREYDCYGDSYTADADVAQLK
EVFSRMKDDKKMMPLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTRL
SIRALELRFYGARVVPHLEEGVSHVLIGEDHSRVKEMKALRRTFAKKFKMVSELWVTHSI
EEGLPKNENQYLI
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacacctgcttcgcagccttctgctaagaaaaccgtggcctctcaggtgcct
tttgcgcatctgtgctgtactctggagcgaatgcagacttgtaaatctcggccggagaag
acaaagtatttcaaggattttttgaattcctggaggaggttccacgaagctcttcatcaa
aaggagaaagatgtcaccgattctttttacccagcaatgcgacttattcttccgcagttg
gaaagagaaaggatggcttacgggattaaagagaccatgcttgcaaagctctatattgaa
ctgcttaatttgcccaaagatggaagagatgctgcaaagcttttaaattacagaacacct
gctggctcacgtggagatgctggagattttgcactgattgcctactttgtcttaaaacct
agatgcccaagacaaggtagactgacaatagagcaagtcaatgagctcttagatgcaata
gctaataataattctgccaaaaacaagggtctgttaaagaaaagtctccttcagttaatt
actcagagctccgcacttgaacaaaaatggcttatccgcatgattataaaggatctgaaa
cttggtgttagtcaacaaactatattttccatttttcatcccgatgctgctgaattacac
aatgtcacaacggatttggaaaaagtctgtagagaactgcatgatcccactgtctcactt
agtgatgtttccatcatgttattttctgcctttaaaccaatgcttgctgctattgctgat
gtccagcaaatagaaaaacaaatgaataatcaggtattctacatagaaactaaactggat
ggtgaacgtatgcaaatgcacaaagatggagatgtttataagtatttttcccgaaatggg
tatgactacactcagcagtttggtgcttcaccccttgaaggttcattaactccatttatt
cataaagcatttaaaagcaacgtgcaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagactcaaacgttcatgcaaaaaggaaacaaatttgatataaaaagaatggtg
gaggaatctgacctgcagacctgctactgtgtgtttgatgtgttaatggttaacaatcag
aagttgggtcatgaaacgctaagcaaaaggtatgagatcttgagtgacatatttacccca
gtagcaggtagaatacatgctgtacataaaacaagtgccagaacaagaaaagaagtaatc
gatgctttaaatgaagcaatagataacagagaggaaggaattatggtgaaagatcccacg
tccacttacaagcctgacaaacgtggggaaggctggctaaaaatcaagccagaatatgtt
agtgggttgatggatgagctggaccttctgatcgttggcggttactggggaaagggctcg
cgcggtggaatgatgtctcattttctgtgcgctgttgcggaaactccacctccaaatgaa
aaacctagtgttttccactctatctgccgtgtcggctctggctatactatgaaggaattg
tatgatctaggtttgaaactggctaaacactggaagccctatcgtaggaaggaccctccg
tgcaacattttgtgtggaactgaaaaacctgaagtatacattgaaccttgtaactctgta
atagttcagattaaggcagctgagattgtcgacagtgatatgtataaaactgactgtaca
ttgagattcccccgaattgagagaataagagaggacaaggaatggtatgaatgcatgact
tcagacattctagagcatctcagaagcaaagcagaagggaaactggcctctaaacacctt
catatagacgatgacgatgagcctcaagagaaaaaaaagaaaactgtaccgaaggtgaag
aagataattgggatagctgaacagtttaaagcacctgatctttctaatataaacaaggtt
tcaaatgtatttgaagatgttgaattttgtgttatgacaggaacagcaagacattcgaag
tctgagttagaaagcagaatagctgaatgcggtggcagtgtggtacagaaccctagacca
gacacgtattgtgttattgtaggaacggagaatgtccgagtgagaaacatcattgcttcc
aacaaatacgatgtggtcaaggcagagtggctcctccagtgttttcaagccaaaatgctt
gtaccttggcagcctgcctttatgattcacatgtgtcctgacacaaaagaacattttgct
cgtgagtatgattgttacggagacagctacacagcagatgcagatgttgcacaactaaag
gaagtgttctcaagaatgaaagatgataagaagatgatgcctttggatgtgattgctgaa
ttagaagaacgttactcatggaatagctgccaactcagtatattcagaggaaacactatt
tatgtggactgttatgctgttgttaatgagcccagaacaaaaatccatggaacaagacta
tcaattagagccttggagctccgattttatggtgcaagagtagtcccacacttagaagag
ggagtgtcccatgtccttataggagaagaccactcccgggtaaaagagatgaaagcgctg
aggagaacatttgctaaaaagtttaaaatggtctctgagctgtgggtaactcattcaata
gaggaaggactaccaaagaatgaaaatcaatacctaatctaa
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