Tinamus guttatus (white-throated tinamou): 104574834
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Entry
104574834 CDS
T08560
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgt03009
]
104574834 (DDX55)
Enzymes [BR:
tgt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104574834 (DDX55)
Ribosome biogenesis [BR:
tgt03009
]
Eukaryotic type
Pre-60S particles
Helicases
104574834 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
104574834
NCBI-ProteinID:
XP_010220448
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGALIITPT
RELAIQIDEVLSHFTKHFPQFSQILLIGGRNPMEDVEKFKEHGGHIIVATPGRLEDLFRR
KADGLDLASCVKSLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSATQTQEVEN
LVRAGLRNPVRISVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHL
VFFSTCACVEYYGKALESLIKQVKIMCIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARG
IDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYVNFLSINQKCPM
QEMKPQRNVLDLLPKLKSMALADRAVFEKGMKAFVSYIQAYAKHECNLIFRIKDLDFASL
AKGFALLKMPKMPELRGKCFSDFIPVTINTDSIPFKDKNREKQRQKQLEQQRKERQENGG
KKKFIKNKAWSKQKAKREKKKKVSAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISE
EEFEKRLTGSQSRLKAETVSDLESKD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgtgcagtctgccaccattcccctcttcatgagtaataaagatgttgcggca
gaagcggtcacaggcagtggcaagaccttggcgtttgtaattcccatcctagaaattctt
cttaggcgggaagaaaaattaaagaaaatgcaggtcggagctctgattatcaccccaaca
agagaactagctattcagattgatgaggtgctgtcacattttacaaaacacttcccgcag
tttagccagattcttttaattggtggtaggaatcccatggaagatgtagaaaagtttaaa
gaacatggtggacacatcattgtagctaccccaggccgcttggaagatctcttcagaaga
aaagcggatgggctggatctagcgagctgtgtgaagtcccttgatgtattagtattagac
gaagcagacagactgctagatatgggctttgaagcaagtttaaataccattctggacttt
ttgcccaagcagagacggacagggctgttctcagcgactcagactcaagaagtggagaac
ttggtgagagcaggtctccggaatcctgtccgcatctcagtgaaggagaagggggtagca
gcaagcaacacccagaaaactccaacacgcctggagaactattacatgatatgcaaagca
gatgaaaaatttaatcagctggtgcattttcttcggcaacacaaacaggaaaaacatctg
gtctttttcagtacgtgtgcctgtgtggaatactatgggaaggctttggaatccttaatt
aaacaagtgaaaataatgtgcattcatgggaagatgaaacacaaacgtaacaagattttt
actgaatttcggaagctcccaggtggcattttagtatgtactgatgtgatggcccgcggc
atagacattccagaagtacattgggttttacagtatgatccacctagcagtgcaagtgcc
tttgtgcatcgctgtgggcgaacggcacggattggcaatgtaggcagcgcactggtattt
ttgcttcccatggaagaatcttatgttaactttctctcaatcaaccaaaagtgtcccatg
caggaaatgaaaccacagagaaatgtgttagatcttcttccaaaactgaagtctatggcc
ctggctgacagagctgtctttgagaaaggaatgaaagcctttgtgtcctatatccaggct
tatgccaaacatgaatgtaatctgatcttccgaataaaagatctggattttgctagtctt
gccaaaggttttgccttgctgaagatgccaaagatgcctgaactaagaggaaaatgtttt
tcagactttattccagtcactataaatacagactccattccatttaaggataaaaatagg
gaaaagcagagacaaaaacaattagaacaacaaagaaaggaaagacaggaaaatggaggg
aagaagaaattcataaagaacaaagcctggtcaaagcagaaagccaaaagggaaaagaaa
aagaaagtatcagctaaaagaaagcgtgaagagggttctgatattgaagatgaagatatg
gaggagctgctgaatgacaccagactcttgaaaagattaaaaaagggcaaaattagtgaa
gaagaatttgagaagagactgacaggcagtcaaagtagactcaaagcagaaactgtgtct
gacttggagtccaaagactga
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