Tinamus guttatus (white-throated tinamou): 104576000
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Entry
104576000 CDS
T08560
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgt01002
]
104576000 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgt04121
]
104576000 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgt04147
]
104576000 (USP13)
Enzymes [BR:
tgt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104576000 (USP13)
Peptidases and inhibitors [BR:
tgt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104576000 (USP13)
Ubiquitin system [BR:
tgt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104576000 (USP13)
Exosome [BR:
tgt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104576000 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
104576000
NCBI-ProteinID:
XP_010221652
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
LETNGDLSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQDP
DSWEEELQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGS
GGNGHALEHYKEMGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMP
VTENGLRDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQTIFSIPE
FQRAYVGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKP
QQNGISPRMFKAFISKGHPEFSSNRQQDAQEFFLHLMNLVERNAVGSENPSDVFRFLVEE
RTQCCQSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKI
PFSACLQAFSEPNNVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKL
DVSVEMPDILDINHLRARGLQPGEEELPDVAPPIIIPDDPKALDIDESAVMQLAEMGFPL
EACRKAVYYTGNMGAEVAFNWIIAHMEEPDFAEPLAISAFGGVDSTAAAGLGAVGLDNQP
PEEMVAIIISMGFQRNVAIQALKATNNNLERAVEWIFSHPEPEEESESALDAMDMENNVN
ANILAATGSEEPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLRVCAS
ERPPKDLGYIYFYHRIPS
NT seq
2219 nt
NT seq
+upstream
nt +downstream
nt
atctagagacaaatggtgatctaagcagtgatgattttgaatatgaagatgaagcaaagc
ttgttatatttcctgatcactatgaaatctccctaccaaacatagaagagttaccagctc
tggtgacaatagcttgtgatgccctcctcagtgcaaagtcaccctacaggaagcaggacc
ctgactcctgggaagaagaactacaggcctctaaacacgccaagactcttgttcagttag
acaacggtgttaggatcccccccagtggttggaagtgctcaaaatgtgacctgcgtgaaa
atctgtggctaaacctgacggacggctccgtgctgtgtgggaagtggttcttcgatggca
gcgggggcaacgggcatgcgctggagcactacaaggagatggggtatcccctggcagtca
agctgggaaccatcactcctgatggagcagatgtctattcctttgatgaagaggagccgg
ttttagatccgcatatagcaaaacatttggcacactttggaattgatatgctgcagatgc
cagtgacagagaatgggctaagagataatgacatcaaaccaagagtctctgagtgggaag
taattcaggaagctggtgtgaaactcaagcccatgtatggtccaggatatactggcatga
agaaccttggaaatagctgctacctcaatgctgtcatgcaaaccattttcagcatcccag
agttccagagagcgtatgtgggaaaccttccaagaatatttgactactctcctcttgatc
caacacaagatttcaacactcaaatggctaaattgggacacggcctcctttcaggccagt
actctaagccacccatgaaatctgagcttattgagcaggtgatgaaagaagaacacaagc
ctcaacaaaatggaatatctccccgaatgtttaaggcttttataagtaaaggtcacccag
aattttcctcgaatagacaacaagatgcacaagaatttttcctccatcttatgaatctag
tagagaggaatgctgttggttcagaaaaccccagcgacgttttccggttcctggtggaag
agcgcacacagtgctgccagtccaggaaggtccgctacacagagagggtggactatatca
tgcagttaccagttgccatggaggcagccacaaataaagatgaattaattgcctatgagc
tgaagaggagagaagcagaagctgccaggagagccccaccagagcttgtgcgtgccaaga
tcccatttagtgcatgtctgcaggccttctcagaacccaacaatgtagatgacttctgga
gcagtgctcttcaagcaaaatctgcaggagttaaaacttctcgttttgcttcatttcctg
agtacttagtggtgcagataaagaagttcacctttggccttgactgggtacccaaaaagc
ttgatgtttctgtagagatgccagatatactagatatcaaccacctaagggccaggggtc
tccagccgggagaagaagaacttccagacgttgctcctcccattatcattcctgatgatc
ctaaagctttagatattgatgagtctgcagttatgcagctggcagagatgggttttcctc
tggaagcatgtcggaaagctgtgtattatactggcaacatgggtgccgaagtggctttca
actggatcattgcccacatggaagaaccagactttgcagaaccgttggccatatctgctt
ttggaggggtcgattccactgcagcggctggtctaggagctgttggactagataaccaac
cacctgaagagatggttgccattatcatttccatgggcttccaaagaaatgtagcaattc
aagcactgaaggcaacaaataataatctggagcgcgcagtggagtggatcttcagccacc
ccgagccagaggaagaaagtgagtctgctttggatgcgatggatatggagaataatgtta
atgccaacatcctcgcagcgacagggtcagaggaacccaggatcaaagatgggcctggga
gatatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggccactatg
tttgtcatctcaaaaaagagggaagatgggtgatctacaatgaccttagagtctgtgcct
cagaacgacctcccaaagacctgggctacatctatttttatcacaggataccaagttag
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integrated database retrieval system
