Tinamus guttatus (white-throated tinamou): 104578585
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Entry
104578585 CDS
T08560
Symbol
LRBA
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgt04131
]
104578585 (LRBA)
Membrane trafficking [BR:
tgt04131
]
Endosome - Lysosome transport
Others
Others
104578585 (LRBA)
Endosome - Golgi transport
104578585 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104578585 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
SUKH_6
Motif
Other DBs
NCBI-GeneID:
104578585
NCBI-ProteinID:
XP_010224445
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSNDNAIFVHNTIHLISQVMDNMIMACG
GILPLLSAATSATHELENIDPTQGLSVEASLTFLQRLINLVDVLVFASSLVFSDIESEKN
MSSGGILRQCLRLVCAVAVRNCLECQQHAQMKPNGDSVKNQKAMQGLTEGGRSTAKSPVD
IVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDI
LEPQNERRPPSHSQSFKASENGSNETPASATVVENPSTALGASPSAFTEDFESTASVRRR
DSGLGEEPASGQVNSSDSEEPLKVIPGPDAISEVLSTLSLEVNKSQEGRSEVGTNDSKAA
ASVPTAKNVNVKDILRSLVSTPADGAAVDPALLPAAFLGALGDAAAEQPVQFHSFDRSVV
VQPKKSTVSSSTAAMSIPANAVSVVSSLDSSQALDLAGESPGRGSSNSKLPAVPAVSSVP
EDSASNMSITDRLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSS
SSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQR
AEDIHRHAEFESLCAQYSADKREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGA
WGSSALSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAGEHALDEDMLVKGKQ
SIKSQVLGNQNSESEILLDGDDDTLSSLEDKDLDNFTGPVNLSAPAQLVAPSVVVKGTXF
LSSEVYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFSEIRSVFSRRYLLQNTALEIFMAN
RVSVMFNFPDQATVKKVVNCLPPVGIGTSFGLPQTRRISLASPRQIFKASNMTQRWQHRE
ISNFEYLMFLNTVAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPK
RAAFFAERYESWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRT
FSSISRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNNYNLGMMDDGTVVSDVELPPWAKS
PEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSIT
DPVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKF
PSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPL
IASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVV
FGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKTNIIGDNTSGDFATPRAILT
GHDYEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEGPENCRRPKLIQASREGHC
VIYYENGLFCVFSVNGKLQATMETGDNIKAIQLSRDGQYLLTGGDNGVVMVWQLWDLKQL
FAYPGCDAGIRSMALSYDQR
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgcttgctcacagacttgctcttctccatagaaacagatatacagatgtgg
agaagccattctacaaaaactgtgatggactttgtgaatagcaatgacaatgccatattt
gtacacaacacaattcacctcatctctcaagtaatggacaacatgattatggcttgtggt
ggcatattgccattgctttctgctgctacatctgctacacatgaattggagaatatcgat
ccaactcagggactttcagttgaagcatctttaacatttctccagagattgataaacctt
gtggatgtgttagtttttgcaagctctcttgttttctctgatattgagtctgagaaaaat
atgtcatctggaggaattctgcggcaatgtctccgtctggtatgtgcagtagcagtaaga
aattgcttagagtgccagcagcatgcgcagatgaaacctaatggagactctgtgaagaac
caaaaagcaatgcagggtcttacagaaggaggaaggtctacagcaaagagtccagtggac
attgtcactggtggaatttctccaatacgagaccatgacagacttctgcaggatatggat
attaatcgacttcgagcagtagtgttcagagacatagaggatagtaaacaggctcagttt
ttggctttggctgtagtgtattttatttctgtgctgatggtctcaaaatacagagatata
ctggaacctcagaatgaaaggagaccaccaagtcatagccagtcattcaaggcatcagag
aatggaagtaatgaaactcctgcttctgctacagttgtagaaaacccgtctactgctctt
ggtgcttcaccttcagccttcactgaagattttgaaagtacagcatctgtacgaagaagg
gactctggtcttggagaggaaccagcttcaggtcaagtaaacagctcagatagtgaagaa
cctctgaaagtcattccaggtccagatgctatcagtgaggtactaagcacactgtctttg
gaagtaaataaatctcaggagggcaggagtgaggtaggaactaacgacagtaaggctgca
gcttctgtgccaactgcaaaaaatgtcaatgtgaaggacattctgcgaagcctggtgagc
acaccagctgatggggctgctgtggatcctgctcttctgccagcagccttccttggagct
ctgggtgatgcagctgcggagcagcctgtgcagttccattcctttgacaggagtgtggtt
gtacagccgaagaaatcaaccgtatcctcttctacagctgctatgagtattcctgcaaat
gctgtcagtgtggtttcttcgttagattcatcccaggccctagatttggcaggagaatct
cctgggagaggatcatctaattcgaaattgcctgcagttcctgcagtttcttcagtacct
gaggattctgcctcaaatatgagtattacagatagacttgaacatgctttggaaaaagcc
gccccacttttgagagagatttttgtggattttgctccctttctttctcgaactcttttg
ggcagccatggtcaggagttgctgatagaaggcacaagtcttgtgtgcatgaaatccagt
agttctgttgtggagttggtgatgctgctttgctctcaggagtggcagaactctatacag
aagaatgctggccttgcctttattgagcttgtcaatgagggaaggttactgagtcaaact
atgaaggaccatttagtaagagtggctaatgaagcagagtttatcttgagtagacagcga
gcagaggatattcatcggcatgctgaatttgagtcactgtgtgcccagtattcagcagac
aaacgagaagaagaaaagatgtgtgatcacttgataagggcagccaagtatcgggaccat
gtgactgcaactcaactaatccagaaaattatcaacattttgacagacaagcatggagcc
tggggaagttctgcactaagtcgtcctcgtgagttctggcgcctcgactactgggaagat
gacttgcggcgccggcgacgatttgtgcgcaacccccttggatcgacacatcctgaagcg
acactaaaagcagctggagaacatgctctcgatgaagatatgcttgttaaaggaaagcag
tccatcaagagccaagttttaggaaatcagaactcagaaagcgagattctcttggatggt
gacgacgataccctgtcatcccttgaggataaagatttggacaacttcacaggtccggtt
aacctaagcgcgccagctcagcttgtggcaccctcggttgtagtgaaaggcactnttttt
ttgtcctctgaggtctactttgaggtggatgaagaagatcccagttttaagaaaatcgac
ccgaagattctagcatatacagaaggactgcatggaaaatggctcttttcagagattcgg
tctgtcttttcacggcgttatctcttgcagaatacagcattagagatcttcatggcaaac
agagtgtctgtgatgttcaactttcctgaccaagcaacagtaaagaaagtggttaactgt
ctacctccggttggcattggtactagttttggactacctcagaccaggcgcatttctttg
gcaagtccacgacagattttcaaagcttccaatatgacccagcgttggcagcaccgagag
atttccaactttgagtatctgatgtttctaaacactgtagcaggtcgcacttacaatgac
ttaaatcagtaccctgtcttcccttgggttatcactaactatgaatcagaggagttggat
cttacacttcctagcaacttcagggacttgtcaaagcctattggagctttgaacccaaag
agagcagcattctttgccgagcgatatgaatcatgggaagatgatcaagttccaaagttt
cactatggcacacattactcaactgcaagttttgcactcacgtggctactaagaattgag
ccctttacaacgcttttcctgaatctgcaaggtgggaagtttgatcatgcagatagaacg
ttttcgtctatttccagagcatggcgcaatagtcagcgtgacacctctgatatcaaggaa
ttgattcctgaattctattacctcccagagatatttgtcaatagcaacaattacaaccta
gggatgatggatgatggaactgttgtgtctgatgttgaacttccaccatgggccaaaagc
cctgaagaatttgttcgcataaacagactggcattagaaagcgaatttgtctcctgccag
ctgcaccaatggattgatctgatttttggctacaaacagcaagggccagaggctgttaga
tccctgaatgttttctactatttgacttatgaaggagctgtaaatttaagttcaataaca
gatcctgtattaagagaggctgtcgaggctcaaatacgaagttttggacagaccccttct
caactgctcatagaaccacatcctccgagaagttcggcaatgcaggtgtatctcctcctg
cagagcccgttgatgttcacagaccaagctcaacaggatgttataatggttctcaagttc
ccatccaactcccctgtcactcatgtagctgccaacacccaacctggcctggccactcct
gctgtgatcacagttactgcaaataggttatttgctgtaaacaagtggcataatcttcct
gctcatcaaggtgctgtacaagaccagccttaccagctgccagtggaaatcgatcctctc
atagccagcaatacaggtatgcacagaaggcaaatcactgaccttttagaccaaagcatt
caggtgcattcccagtgtttcgtcatcacctctgacaatcgttacatcttggtctgtggc
ttctgggacaagagtttccgagtttattctactgattcgggtaaactgatgcaagtagta
tttggacactgggatgttgtaacctgccttgctcgctctgagtcctatattggaggaaat
tgttacattctctcaggatcacgtgatgcaacattgctgctctggtattggaatggcaaa
accaatatcatcggtgacaatacgagtggtgattttgcaactcctcgagctattttgaca
ggacatgactatgaaatcacctgtgctaccgtttgtgctgaacttggcttggtaataagt
ggttcaaaagaaggaccatgtctcatacattctatgaatggagatctactgaggacatta
gaaggtcctgaaaattgccggagaccaaaacttattcaggcttcaagagaaggtcactgt
gtcatatattatgaaaatggcctcttctgtgtattcagtgtgaatgggaagcttcaagcc
accatggaaacaggggacaacataaaggcgatccagctgagtcgagacgggcagtacctg
ctaacaggaggggacaacggggttgtcatggtctggcagctgtgggacctcaagcagctt
tttgcttacccagggtgcgatgctgggatccgatcaatggccctgtcatatgaccaaagg
tga
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integrated database retrieval system
