Taeniopygia guttata (zebra finch): 100218120
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Entry
100218120 CDS
T01082
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100218120 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100218120 (NVL)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100218120 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_14
TIP49
AAA_28
Mg_chelatase
AAA_17
AAA_33
RNA_helicase
nSTAND3
Vps4_C
Zeta_toxin
ABC_tran
Viral_helicase1
AAA_18
NACHT
Rad17
AAA_3
IstB_IS21
TsaE
ATPase
Sigma54_activ_2
Parvo_NS1
Cytidylate_kin2
Sigma54_activat
DUF815
Motif
Other DBs
NCBI-GeneID:
100218120
NCBI-ProteinID:
XP_012427833
UniProt:
A0A674HN14
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All DBs
Position
3:94139566..94181469
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AA seq
852 aa
AA seq
DB search
MRCRPGRVSDPRLKQRIKQYLASSKCGEYVDIGILASDLQKTYSVDYGRRKRNAFRIQVA
KVFEIISNEKEREDLAVLESEHVAKRARQQEKNDTTGSGTDDSDYDDYPEDLSANHMNSS
LLSLYKKGNPDSVPSTPKNDPVETSPRVRTAPHTSTLAPESRGERRISDGGWFIDKTPDG
KDFFIDLSEDGEGDEKKVISEKPTEFSVLESERKKTKGRRAKRKKGEFPDVDGEIESMLL
KKVRNKGSELYHPSVKFEDVGGNDETLKEICKMLLHIRHPEVYTHLGVVPPRGFLLHGPP
GCGKTLLAQAIAGELELPMLKVAATEIVSGVSGESEQKLRELFEQAVSSAPCVLFIDEID
AITPKREVASKDMERRIVAQFLTCMDDLNNVAATTQVLVIGATNRPDSLDPALRRAGRFD
REICLGIPDEGAREKILQTLCRKLKLPESFEFRHLARLTPGYVGADLMALCREAAMGTVN
RVLITSGEHHTPGGSTAEGSPGVGADILEEEGTNQPQLPPKDELQRLLDLLKEQAPLPEE
QLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMAILAPVRNP
EQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVR
QVFQRARNSAPCVIFFDEVDALCPRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAAT
NRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDSDVSLEDIAYSQH
CDCYTGADLSALVREASICALRQEMALQNTQSKKGEIKISHKHFEEAFRKVKSSVSKQDQ
IMYEELHRSLCR
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgccggcccggccgcgtctccgatccccggctgaagcagcgcatcaagcagtat
cttgcaagtagtaaatgtggggagtatgttgacattggaattctagcatctgatttgcag
aaaacctacagtgtagattatggacgaagaaagagaaatgcctttaggatacaagttgca
aaagtgtttgaaataatcagtaatgaaaaagaacgtgaagatttggcagttttagaatct
gaacatgtggcaaaaagagcaagacaacaagagaaaaatgacactactggaagtggcaca
gatgactctgactatgatgattatccagaagatctatctgcaaatcacatgaacagttcc
ctgctgagcttatacaagaaaggaaatcctgattctgttccatccactccaaaaaatgac
ccagtggagacctctcctcgtgtgagaacagcacctcacacgagcaccctcgcaccagaa
tccagaggtgaaagacgaatctctgatggtggctggttcattgataaaactcctgatggg
aaagacttcttcattgacctttctgaggatggagaaggagatgaaaagaaagtgatttct
gagaaaccaacagaattttctgtcttggagagtgaaagaaagaagacaaagggcaggaga
gcaaaaaggaaaaaaggagaatttccagacgtagatggagaaattgaatccatgttactt
aagaaagtgagaaataaggggtcagagctttaccacccttcagtgaagtttgaggatgta
ggaggcaatgatgaaacattaaaggaaatatgcaagatgctccttcacatccgtcatcct
gaggtctacacccacttaggagtggttccacctcggggctttcttttgcatgggccaccg
ggatgtgggaagaccctgctggcacaggcaattgctggggagctggagctcccaatgctg
aaggtggcagcaacagagattgtgtctggagtgtcaggggaatctgagcagaaactgaga
gagctgtttgagcaggctgtgtccagtgctccctgtgtcctcttcattgacgagatcgat
gcgatcaccccaaagagagaagtcgcatccaaggacatggagcggaggattgtagctcag
ttcctcacttgtatggatgacctgaataatgtggctgccaccacccaggtccttgttatt
ggagcaacaaacagacctgactccctggaccctgcactgaggagagccgggagatttgac
agagaaatttgtttagggatcccagatgaaggggcaagagagaaaattcttcagactttg
tgtcgcaaactgaagctcccggagtcgtttgagttccgtcatttggcacggctgactccg
ggctatgtgggggctgatctgatggccctgtgccgtgaggcagccatgggcacagtcaac
agggtcctgataacatctggggagcaccacacacctggggggagcacggctgaaggaagc
ccaggggtaggagcagacatcctggaggaagagggcaccaaccaaccacaacttccacct
aaggatgaattgcagagacttttggatttgctgaaggagcaagcccccttgcctgaggag
cagctgcagaagctgtgcattgagatgaatgattttattgttgcactgtcatcagtgcaa
ccctctgccaagagagaaggctttgtcacaatccctgatgtgacatgggcagacatcgga
gccctggaagatgttcgggaggagctgaccatggcaatattggcacctgtgcgaaacccg
gagcagtttaaagctctgggcctgactactccagctggtgtcctgcttgcagggcctcca
gggtgtggcaaaacactgttagctaaggccgtggcaaacgagtctggactgaacttcata
tctgtgaaaggtcctgagctgctaaatatgtacgtgggtgaaagtgagcgtgctgtccgt
caggtgttccagcgtgccaggaattcggccccctgtgtcatattcttcgatgaagttgat
gctttgtgccctcggaggtctgaccgtgaatcaggagccagtgtgcgggtagtgaaccag
ctcctcaccgagatggatgggctggagaatcggcagcaggttttcattatggctgccaca
aacaggccagatataattgacccagctatcctgcgtcccggtaggctggataaaacactc
tatgtgggtttgccaccacctgaagatcgacttgctattttaaagaccatcaccaaagat
ggcacccggcctcccctagatagtgatgtgagcctggaggacattgcttacagtcagcac
tgtgattgctacacaggggcagacctttcagctctcgtgcgtgaagcttccatttgtgcc
ttgagacaggaaatggccctgcagaatactcaaagcaagaagggagaaatcaagatttct
cataaacactttgaagaagctttcaggaaagtgaagtcttcagtatccaaacaggatcaa
ataatgtatgaagaactgcatcggtcgctgtgcaggtga
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