Taeniopygia guttata (zebra finch): 100219028
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Entry
100219028 CDS
T01082
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100219028 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100219028 (PEX6)
Membrane trafficking [BR:
tgu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100219028 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
RuvB_N
Vps4_C
RNA_helicase
AAA_2
TsaE
AAA_25
bpMoxR
AAA_33
Parvo_NS1
DUF815
TIP49
AAA_28
IstB_IS21
AAA_14
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
100219028
NCBI-ProteinID:
XP_030124755
Ensembl:
ENSTGUG00000005146
LinkDB
All DBs
Position
3:complement(92284931..92298937)
Genome browser
AA seq
973 aa
AA seq
DB search
MAVAVLRPLDAPPAELSPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVTVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGTGTRTALAPPPPPPAPPGTARGRPPAAAA
PPLVSRFAAAAAGPRLRAVPGGTGGGGAEVWVSRRGLLALGLFQGEWVRVGAEGAAREHL
AALLARPPPWEYPRAARRGLADGTALLAPALAFNLGCDPAAPAHLRLQRYERTGAADGKG
SRSVLSVPPFAKELQLEIVCSPAYSTRGSYDCVLYRHFQRPRLVQEGDILCVPTFGNAEF
IELNADKFLRWPELYFKVKKIIGTVEDEQSEGYLVDTQNTSVYLVGSTNSTVPSAPAYNS
NEFWSSLSPAGLSDVVKQLCDALRPHLNRRASALSSVGSVLLSGPSGSGKLLAVRAVCSC
LNLHLFKVDCVSLCSDTSAATEEKVQVAFNQAQQYQPCVLLLKDIEVLGRDRDGLGEDAR
VIATLRQLLLDTDPALSHPVLVIGTTCKPQNVPTDVQTAFLHEVKIEAPSEEQRRLMLSM
LTASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSEEVERDF
CTAGFPVLEEDFSAALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPLEH
PELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRS
VFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTREVFVIGA
TNRPDLLDTALLRPGRFDKLVYVGISEDRESQLQVLSAVTRKFKLDPSVNLTTILEKCPA
QLTGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAATRLQPSVSEQEL
LRYRLIQQKFAAS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcgccgccggccgagctgtcgccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cggctggggctggcggccggccggagggtgaccgtgtggcccgtgcggcgcccgccggcg
ctcgcctgggtgctgctgggggcggcggggcgggcggggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggcccgctggtgctg
gaggcgcgcccggcgctccaggggttgctgggcaccgggacgcgcaccgccctcgcgccc
ccgccgccgccgcccgccccgccgggcaccgcccgcggccgccccccggccgccgccgcg
ccgcccctcgtctcccgcttcgccgccgccgccgccggcccgcggctgcgggcggtgccc
ggcgggacgggcggcggcggggcggaggtgtgggtgagccggcgcgggctgctggcgctg
gggctgttccagggcgagtgggtgcgggtgggcgcggagggggcggcccgcgagcacctg
gcggcgctgctggcgcggccgccgccctgggagtacccgcgggccgcccggcgcggcctg
gccgacggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgcc
gcccccgcgcacctccgcctgcagaggtacgaaaggaccggcgccgcggatgggaagggc
agccggtccgtgctgtctgtgcccccgttcgccaaggagctgcagctggagatcgtctgc
tcgccggcctacagcacccggggaagctacgactgcgtgctctacaggcacttccaaagg
ccgcggctggtccaggagggagacatcctgtgtgttccaacatttggaaatgctgagttt
atagaactaaatgcagacaaattcctaaggtggccagagctttatttcaaggtgaagaag
atcataggcacggtggaagacgagcagtccgagggttacctggtggacacccagaataca
tctgtctatctggtgggttcaacaaatagcactgtgccatctgctccagcctataacagc
aatgagttctggagcagtttgtctcctgcgggactttctgatgtcgtgaaacagctctgc
gatgctcttcggcctcacctgaaccgtcgggccagtgcactgagcagcgtgggcagcgtt
ctcctctcggggccgagcggcagcgggaagctgctggctgtcagagctgtgtgtagctgc
ctcaacctccacctcttcaaggtcgattgcgtcagtttgtgcagtgacaccagtgcagcc
acagaggagaaagtacaggtagccttcaaccaggcccagcagtaccagccctgtgtgctg
ctgctgaaagacatcgaggtgcttggcagagaccgagatgggctcggggaggatgccagg
gtcattgctactctgaggcagctgctcctggacacagacccagcactgagccaccctgtc
ctggtgattggcacaacctgcaagccccagaatgttcccacagatgtgcagactgctttc
cttcatgaggtgaagatcgaagccccctcagaggagcagaggaggttgatgctgagcatg
ctgactgccagcctgcctctgggcaaagaagtgagcctgtccaagctggcccgcaggact
gccggatttgtgctgggagatttctgtgccttgttgtcccacagcagccgggctgcttgc
acccgcatccaggccttgagttttccaggtggactgagcgaagaagtggagagggatttt
tgcactgcagggttcccggtgctcgaggaggattttagtgctgcactggaccagctgcat
gacgcccactcgcaggcagtgggagccccaaagatcccctcagtgtcctggcaggatgtt
ggtgggctgcaggaggtgaagaaggagatcctggacactatccagttgcccttggagcac
ccagagctgctatcactgggtctgtgccgctctggtctgctgctgtatgggcctccaggg
acaggaaagaccttgctggcaaaagctgtggcaaccacgtgcaccatgacattcctcagc
gtgaaagggccagagcttatcaacatgtacgttgggcagagcgaggagaacgtgcgcagt
gtgtttgccagagccagggcagctgctccctgcattatcttctttgatgaactggattcc
ctggcccccagtcgtgggcgaagtggagattcagggggtgtcatggacagagttgtctca
cagctccttgcagagcttgatggccttcattccaccagagaggtgtttgtcattggagcc
acgaacaggcctgacctcttggacacagctctgctacggccgggcaggtttgacaagctg
gtctatgtgggcatcagcgaggaccgggagtcacagctgcaggtgctgagcgccgtcacc
aggaagtttaaactggatccttctgtgaatctcaccaccatcctagaaaaatgcccagct
cagctgacaggagcagacatctacgccctgtgttcagatgccatgatgtgtgctgtcaaa
cgcaaggtggagtggattgaggaaggactggatactgagaagtctgctctgatcctgacc
atggaagactttctgcaggctgctaccaggttgcagccatcagtctctgagcaggagctg
ctcaggtacagacttatccagcagaagtttgcggcttcctaa
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