Taeniopygia guttata (zebra finch): 100219267
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Entry
100219267 CDS
T01082
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100219267 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100219267 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100219267 (USP13)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100219267 (USP13)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100219267 (USP13)
Ubiquitin system [BR:
tgu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100219267 (USP13)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100219267 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
100219267
NCBI-ProteinID:
XP_002193106
Ensembl:
ENSTGUG00000010622
LinkDB
All DBs
Position
9:complement(18724009..18773557)
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AA seq
861 aa
AA seq
DB search
MQRAALFRAADAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHMERHYRKTGQCVYLHLKRHVRQKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLVLFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQEPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCCRCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
TEHYRETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMANHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSHPDPEEESDPALDTMDMEN
NANANILSETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttccgcgccgccgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccctacatgcccacgatccgcgtgcccaagtcaggggaccgggtctac
aagacggaatgtgccttctcctacgactcgcccgattcagaaggaggtctctacgtgtgc
atgaacacgtttctggggtttggaagggagcacatggagcggcactaccggaagacagga
cagtgtgtctacctgcacctgaagcgacacgtgagacagaaggtaccaggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagtgatgactttgaatatgaggatgaagcaaaacttgttctctttcctgatcac
tatgaaatctcactacccaacatagaagagctaccagcactggtgacgatagcttgtgat
gcactgctcagtgcaaaatcaccctacaggaagcaggaacccgactcttgggaagaggag
ctgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattccc
cccagtggttggaagtgctgtaggtgtgacctgcgggagaacctgtggctgaacctgacg
gacggctccgtgctctgcgggaagtggttcttcgacggcagcgggggcaatgggcacgcc
acggagcactacagggagacaggctatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccacatatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgacataaagccaagagtttcggaatgggaagtgattcaggaagctggtgtg
aaactgaagcccatgtatggcccaggatacacaggcatgaagaacctggggaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaatact
cagatggctaaactgggacatggcctcctttcaggccaatactctaagccacccatgaaa
tctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagaattctcctctaatagacag
caagacgcacaggaatttttcctgcatcttataaatctagtagagaggaaccccgtgggc
tcagagaaccccagcgatgttttccggttcctggtggaggagcgcacgcagtgctgccag
tccaggaaggtgcgctacaccgagagggtggactacatcatgcagctccctgtggccatg
gaggcagctacaaacaaagatgaattaattgcctatgaattgaagaggcgagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagtgcttgtctg
caggccttttctgaaccaagcaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctattgacatg
ccagatttcctggatatcagtcaccttcgggccagagggctccagccaggagaagaggaa
ctcccagacattgctcctcccattgtcattcctgatgatccaaaagatcacatggcgaac
catttcgtggagtccctagatattgatgaatcctcagttatgcagctggcagagatgggc
tttcctttggaagcgtgtcggaaagctgtgtactatacaggcaacctgggggctgaagtt
gctttcaactggatcattgcacacatggaagaaccagacttcgctgagccattggtcata
cctgcatttggagaagtggcttccagtggggcagctgctttaggagctgtagggttagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcgattcaggcactgaaggcaacaaacaataacttggagcgtgcactggagtggatcttc
agccaccctgaccctgaggaagaaagtgaccctgctttggacacgatggatatggagaac
aatgctaatgccaatatcctttcagagacagggtcagagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactacgtttgtcacctcagaaaggaaggaagatgggtgatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag
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