Taeniopygia guttata (zebra finch): 100220653
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Entry
100220653 CDS
T01082
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X3
KO
K03124
transcription initiation factor TFIIB
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100220653 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100220653 (GTF2B)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100220653 (GTF2B)
Prokaryotic type
Archaeal type
TFB
100220653 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
100220653
NCBI-ProteinID:
XP_002195495
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All DBs
Position
8:complement(15467054..15492187)
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AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgtttggatgtacttccgagggtgacttgcccaaatcatccagat
tccattttagtggaggactacagagctggtgatatgatttgttctgagtgtgggctagta
gtaggtgaccgggtcatagacgtggggtcggagtggagaacgttcagcaatgacaaagca
accaaagacccatctcgagttggggatacgcagaatcctttgctcagtgatggtgacttg
agtacaatgattggcaagggcacaggtgcagcaagttttgatgaatttgggaattcaaag
taccaaaatcgcagaactatgagcagctctgatcgtgcgatgatgaatgcttttaaagaa
attacgaacatggcagatagaatcaacctccctagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcaaaagagcctgaaggggagaagtaatgatgctattgct
tctgcatgtctctacatagcctgtaggcaagagggtgttccaagaacatttaaagaaata
tgtgcagtgtcccggatttcaaagaaagaaataggccggtgttttaaacttattttgaaa
gctctggaaaccagtgttgatttgattacaactggcgacttcatgtcacgattctgttct
aatttgggtcttcccaaacaagtacaaatggcagcaacacatattgcccgtaaagctgtg
gaattagacttggttcctgggagaagccctatctctgtagcagctgcagctatttacatg
gcatcacaggcttcttcagagaaaaggacacaaaaagaaattggtgatattgctggtgtg
gctgatgttacaattagacagtcatacaggctgatctatcctcgagctccagatcttttc
ccagcagacttcaagtttgataccccagtagacaagctaccacagctgtga
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