Taeniopygia guttata (zebra finch): 100221172
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Entry
100221172 CDS
T01082
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100221172 (TRAPPC8)
Membrane trafficking [BR:
tgu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100221172 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
100221172
NCBI-ProteinID:
XP_012427511
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All DBs
Position
2:complement(109577014..109628768)
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AA seq
1470 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPLVAALCSEEAERLTRRNNLSFAELVRPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPGAIRKLLHDVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSEPDPVEQFLKLSQEQHRIQHSSEYSYPKWFIPNTLKYYVLLHDVSTGEEQRADSIYE
EMKQRYGTQGCYLLKINSRVSNRGADEQIPDPWSQYLQKNTIQNQDSYEDYTVSNKNTDH
LISDGIDSEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKASTSVQDSKKSNSGTPHGACL
TLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFFATKKWFSGSKVPE
KSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLYAA
GALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQSKYS
EAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKHA
LRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQQG
AFLREYLYVYKNATQASPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQAATHVSLDQ
EYDSESSQQWKELEEQVVSVINKGTIPSNFQPTQFCLNRYSDNSKFPLAVIEEPITVEVS
FRNPLKVPLLLTDLSLLWKFQPKDFSVKCDGETKEQGTCDEDMVGTEAIAEFLINSEETK
VARLKLFPHQTGELHILGVVYNLGSVQGAVSLDGIDPSIGLQTGKFVSNGLSVRGRQDLE
IQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFVN
VSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSSA
SSADFGVGTGGSPEVIQVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYYEGIKKH
SKMCHRVLRHTAVICTSRSLHVRATVCRSNALGDEEGRGDNMLLFVDVENINTSETGVKE
FHIAQVSSNSKHWKLQKSVNISGDKDTKLASRERAKLCFKAVRCKNSEENYTFADIVFGN
EQIISSASPCADFFFQSLSSEFKRTHVQSHTHTSQRAVKQSFDETVRLIQRCSEVDLNIV
VLWKAYVVEDSKQLILEGQHHVALNTVGKEAFSFPQKQGFKKILGNSDWEDLEQELPETV
LLKFFRPENTPVPARPTPEQLSNLIKTSLHYPESFSHSFHQKSLCLVPVTLLLSNCSQAV
VDVMIDLRHKPTSSEALEIHGSFTWLGQTQYKLQLKGQEVYSLQLKACFVHTGVYNLGTP
RVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcatccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcggctcacccgcaggaacaacctcagcttcgcc
gagctggtcaggcccttctgccgcctcacctcggaagttcacatgagagatcctaataat
cagcttcacatcattaaaaatttgaagatcgctgtcaacaacatcattactcacccacct
cagcccggtgccattcggaaacttttgcatgatgttgtgtctgtcagtcagcctgctgaa
ggactggtagctaatgtgatcacagctggagattatgatctcaacatcagtgatcgctca
gttaaagctagtgttccttggtacagtaattggaaagagacactgatggaattgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagaatgctttcttcag
tccatgcctgcatctgatcacgaattcttaaaccactatgttgcttgtatgctggtagtt
tcttctagtgaacctgaccctgtggagcagttcctgaagctgtcccaagaacaacatcgg
attcagcacagtagtgaatactcgtatcccaagtggtttataccaaacacacttaaatat
tatgtgttactgcatgatgtaagcacaggagaagaacaaagagctgactccatttatgaa
gagatgaaacagagatatggaactcagggttgctatttgctgaaaataaattctcgggtg
tcgaacagaggagcagacgaacagataccagatccttggagtcagtaccttcagaaaaac
actatccagaaccaggattcctatgaagattacactgtttcaaacaagaatactgatcac
ttgatatcagatggcatagacagtgaaattaaagacggcttgtcaaataactttaagact
cacccccttcaactggatcatcccagtggcagtttggatagcactgattacatgaaggct
tctacatcagttcaagactcaaagaagtcaaattctgggacacctcatggtgcttgctta
actctcacagatcacgatcgaattaggcagttcatacaggaattcacatttcgggggctt
ctaccacacatagaaaaaacaattagacagctcaatgatcagttaatatccaggaaaggc
ttgagccgatcactgttttttgctactaaaaaatggtttagtggcagcaaggttccagag
aaaagtataaatgagctcaagaatacttctggtttgctgtatccaccagaagcgccagag
cttcaaatccggaagatggcagacttgtgctttttggtgcaacactatgaacttgcatat
agctgctaccatacagcaaagaaggacttcttaaatgatcaggcaatgctttatgcagct
ggagcactggaaatggcagcagtatcagcttttcttcagcctggagctcctaggccatat
cctgctcattatatggagacagcaattcagacttatagagatatctgcaagaacatggtt
ctggctgaacgctgtgtactgcttagtgctgaaatcttaaaaagtcaaagcaaatattca
gaggcagctgctcttctgattcgtttgaccagtgaggattcagatcttcgcagtgcactc
ctattggagcaggcagcccattgttttataaacatgaaaagtcccatggttagaaagttt
gcatttcatatgatattggctggccacagatttagtaaagcagggcagaagaaacatgcc
ttacgttgctactgtcaagccatgcaggtttacaaagggaagggctggtctcttgcagaa
gaccacattaatttcaccatcggtcgtcagtcctttacacttcgtcagctggacaatgct
gtgtctgccttcaggcatattttgatcaatgacagtaaacagcctccagctcagcaagga
gcttttttaagagaatatctttatgtctataagaatgcaacccaggcatcacctgatggt
cccttgccacagcttcctttaccgtatattaacagctcagcaactcgtgttttctttggc
catgatcggcgaccagcagaaggtgaaaagcaggcagctacgcatgtaagcctggatcag
gagtatgactcagaatcatcacagcagtggaaggagctcgaggaacaagttgtgtctgtg
ataaataaaggaaccataccttcaaattttcagccaacacagttctgtttaaatcgctac
tcggataactccaaatttccacttgctgtgatagaagaaccaataactgtagaagtgtcc
ttccgaaaccctctgaaagttccgcttcttttgactgacctttcattgctgtggaagttt
caacctaaagacttcagtgtaaagtgtgatggagaaacaaaagagcagggtacgtgtgat
gaagatatggtaggaactgaagcaatagcagaatttttaattaatagcgaggagacaaaa
gtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtcgtt
tataatcttggcagtgttcaaggtgctgtgtcattagatggaatagatccttctattgga
ttacagacaggaaaatttgtttccaatgggttatctgtacgaggaagacaagatttagaa
atccaagggcctcgacttaataacacaaaagaggaaaaaacatcgattaaatatggacct
gatcgacgtttagatcccattattacagaagaaatgcctttgttagaggtgttctttata
aattttcctacagggcttctctgtggagaaatcagaaaagcgtatgtagaatttgtgaac
gtgagcaagtgccctcttactgcactaaaggtcgtgtccaagcatccagaatttttcact
tttggtggaaatactgctgttttaacaccactaagtccttcagcatctgagaactgtagt
gcttacaagactgttgtgacagatcctacctctgtgcgaacagcactgctgtcttcagct
tcttctgcagactttggggttggcacaggaggttcacctgaagtaatacaggttccgctt
cctgatgctgttcttcttcctggggcttcagtgcagctgccgatgtggttacggggacca
gatgaagaaggtgttcatgaaattaacttcttgttttactatgaaggtattaaaaagcac
tcaaaaatgtgtcacagagtattaaggcacactgcagttatttgtaccagtcggtctctg
cacgttcgggctactgtctgcagaagtaatgcacttggggatgaagaaggcagaggggac
aacatgttgctctttgtggatgtagaaaatatcaatactagtgagacgggtgttaaggaa
tttcatatagcgcaagtttcaagcaatagcaagcactggaaacttcaaaaatctgttaac
atctctggagacaaagatactaaactggctagcagagagagagcaaagttgtgttttaaa
gcagtgagatgcaaaaactcagaagaaaattacacatttgcggatattgtctttggaaat
gaacagataataagttcagccagtccttgtgcagacttttttttccaaagcttatcctct
gaatttaaaagaacacatgtgcaatctcatactcacacgtctcaaagggcagtgaaacaa
tcgtttgatgaaacagtcagattgatacaaagatgcagtgaagttgatttgaacattgtg
gtactgtggaaggcatatgttgtggaagacagcaagcagcttattttggagggtcagcat
catgttgcccttaacacagttgggaaggaggccttttcatttcctcagaagcagggtttt
aaaaaaatactcgggaattctgattgggaggacttggaacaggaactaccagaaacagtt
ctattaaagttttttcgaccagaaaacacaccggtacctgcaagaccaacaccagagcag
ctttctaatcttattaagacaagtcttcattatccagagtcttttagtcattcttttcat
caaaaaagcctctgtctggtacctgtcactctcctactttccaattgttcccaggctgtt
gtagatgtgatgattgatttgcggcataaaccaacaagctctgaagcactagaaatacat
ggatcttttacatggcttgggcaaacacagtacaagcttcaacttaaaggccaggaggtc
tatagcttgcagctcaaagcttgctttgttcatacaggtgtctataaccttggaaccccc
agagtatttgccaagcttgtggaccaagttactttgtttgaaacaagtcagcagaactcc
atgcctgcactgattattatcaataatatctga
DBGET
integrated database retrieval system
