Taeniopygia guttata (zebra finch): 100221862
Help
Entry
100221862 CDS
T01082
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
tgu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100221862
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100221862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100221862
03110 Chaperones and folding catalysts [BR:
tgu03110
]
100221862
04121 Ubiquitin system [BR:
tgu04121
]
100221862
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100221862
Chaperones and folding catalysts [BR:
tgu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
100221862
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
100221862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Pro_isomerase
IR1-M
zf-RanBP
WH1
VID27_PH
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_7
TPR_11
Motif
Other DBs
NCBI-GeneID:
100221862
NCBI-ProteinID:
XP_030135062
Ensembl:
ENSTGUG00000009571
LinkDB
All DBs
Position
1:87472039..87505559
Genome browser
AA seq
2995 aa
AA seq
DB search
MMRRTKPEVERYVASLQAAAPSPREKSMKGFLFAKLYFEIKEYELAKRYISTYLNVQERD
PKAHRFLGQIYEAEGNIEKAFGCYKRSVELNPTQKDLVLKIAELLCNNDVTDGRAKYWVD
RAAKLFPGSPAIYRLKEQLLDCKGEDGWNQLFDLIQAELYARPDDIYINIRLVALYRSNN
RLKDAVLHCQEAEKRIPLQSSLEWCSCVVETFEEYLESLQDLEYDKNNWRTIKKDHLLAY
SSFVKLRLSSRDVQECREALESFDRVLQSVKPYVSVADELSRTYVEMKGQLYMHAGALLL
KMAQDNETQWRAMCELATLCYLLSFQVPKPKSKLIKGDQTGQDMLEMLACDRKSQSGHML
LNLSHGKQDFFKEIVESFANKSGSFALFDSLFESGTSRERSFIGTDDIGNVSTQAPVQIE
LHKYDIGAIRLHNGSLQHLVWLGLQWNSMSVLPPMRKWLKQLFHLPQETSRLETDAPESI
CLLDLEVFLLGVIFASNLQLQEKFNSHYSAHQPQFLPLPICKQLYTEKQRSWWDAVRTLL
QRKSVPGTAAKLRLIVQHGISTLRTLDKHGLQPALIIYWAKSLQKTGINLNSFYDQKEYI
GRSVYYWKKVLPMLEIIKKRRSISEPTDPLFKHFHSVDIQVLQVAAYEEEAQIAFAMLDA
VDGKTDDALIAFEAIENVVSYWNLAMIFQRKAEEIENDVMLPEEHEEHKTYLLKAKYYLM
KIIAESSSDMSVTEKLPVSLETVREVLDTVIQELGENGEEGSLAFRNGLPRTVDSAMKHS
TPSPTKFSFSPTKTYKFSPKTPPQWAEDHKSILQMICQQVEALKNEMQEMKLNNSNTNAS
PRWPAENYGTDAIPDNYQRAQNLHEAPLTVATTGPSVFYSQSPAYNSQYLLGTAATNVTP
AKPPVYGMNRLTPQPHIYSYQPPPMHTPPLQNTSGCMFSQEMYGPPLRFDSPGTTLISPR
TADDYYNYSVPQASTNPTLPKPGYFTNRSVTPPTLKPAEPKAMPKFGQPGTAEGSKPPLP
TPAQPSQPTTFKFKPNFKSNDGDFTFSSPPQVAPQPLNAPFNSKESLLDLLTSDKPLEDD
RYVEQKPVSDPTNSSRNIFSFSNKHIPGMSLRENMGQNAHKNLGVEKSDAFGVQEPSKPV
FIASNSDLANRSHETEGGSTHGGDEDDDGPHFDPVVPLPDKIEVKTGEEDEEEFFCNRGK
LFRFDADSKEWKERGIGNVKILKHKVSGKFRLLMRRDQVLKICANHYINTDMKLTPNAAS
EKSFVWHALDYADELPKPEQLAIRFKTPEEAMLFKKKFEEAQNILKSLGSNADTSVAQSS
GTAKETANQDIKESNRTTSGTMNLGFQFLKDGTSSERDSKGTLTATSTASSTTISFGKDA
QQACSSGGFGQHLLKKDQWECKVCLVLNEATVKNCVACQSPNPSMWETHGTPLTGSASLK
ASGNTVQDKFGSAFAKKEGQWDCSVCLTQNEAKYVNCCSCQSPKPQNQPNTSTPSVQASV
ALGLGSIADTSKPQKNGFEGLFTKKEGQWDCTTCLVRNEGSSLACVACETPNPSGKPAGD
TLPAPAFGLKSKLPDLDGGQLRTGFKFGLEQGKTPPFTFQVSSDTEAKPAKEGFSFSMQM
PADGFKFGIQESSKNTPKKDEPSKEPMTGFLKSIDEKDKKELPSDSGTGFQFQETADKEK
IDFVFGQNNSTSTFAEHAKNIPREGFQFGKKDPNFKGFSGAGEKLFSSQNSKTDQKANTS
ADLSEKDDDVYKTEDSDDIHFEPIVQMPEKVEPFTGEEDEKVLYSQRVKLFRFDPETSQW
KERGVGNLKILKNEVNGKVRILMRREQVLKVCANHWITTTMNLKQLSGSDKAWMWMANDF
SDGDAKLEHLAAKFKTPEQAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRTAQLIQRAEE
MKCGLKDLKTFLTDDKTKLSEEESVNPVCTSSTSDLVIKPHAESTGPTLEWDNYDLREEA
LDDSVSSSVYASPLASSPVRKNLFRFGESTTGFSFSFKSALSPSKSPAKQNQSRTSVGTD
EDSDVTQEEERDGQYFEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKDANQWKERGI
GDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMNMQQMKGSDRAWVWTACDFADGER
KVELLAVRFKLQDVADSFKQIFDEAKHAQERETLITPLSSRANTPKESPCGKNAVAVLEE
TTRERTDTNYGEDTSDTTIEAAEVSNTSETSTKTVVSPPKFVFGSESVKSIFSNEKSKTF
TFGNTSATGSLFGFSFNPPRKNEGHIPASQNTAQKEMEVSEPPKITNATQKPVDSKVDNF
PASTQDGPSNFSFRILEKGFNFSLFKSNPMAFWTSTSSMQPGSKAEKTTVPEDDVPSDEV
VIVYELTPTPEQRALADFLKLPSTFFCYKNKPGYVSDEDDDEDYETAVKKLNGILYPSDS
KEKKKGQGPVKAGLARKSEFNTERECAATLEKKPAPEEKDETKVLHVPFTSVCGVSTDAE
GNSLKDLKSEAKIQEMKENEVVSSSDVVSTSKEEIPAPSKDEVTVCVQSGSSSEESHSTI
ETVQVSQTSSRAEDKPVDLSTKKSDSDGSESTQENRIISFGFGNTAGLSFADLASKSSED
FAFGSKDKNFKWANTGATVFGDTTHKDEDGSDDEVVHSDDIHFEPIVSLPEVEVKSGEED
EEILFKERAKLYRWDRDVTQWKERGVGEIKILFHTQKKYYRILMRRDQVLKVCANHVITK
EMNLVPSDTSNNAFIWTATDYADGEVKVEQFAVRFKSQEMANSFKKMFEECQLSLSELQK
GHLSLAAGLSKDTNPVVYFEVSADGEPLGHITMELFANIVPRTAENFRALCTGEKGFGFK
NSRFHRIVTDFVCQGGDITNHDGTGGRSIYGTAFEDENFTVKHTGPGLLSMANKGRDTNN
SQFFITLKKAEHLDFKHVVFGFVKDGMDVVKKIESFGSPKGLVNGRIVITDCGQI
NT seq
8988 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcggacgaagcccgaggtggagcgctacgtcgcctccttgcaggccgcggct
ccgtcgcccagagagaaatcgatgaaaggattcctctttgctaagctgtattttgaaata
aaagaatatgaacttgctaaaagatatatatctacatacctcaatgtacaagagagagat
cccaaagcacacagatttcttggacaaatttatgaagctgagggtaacatagaaaaagct
tttgggtgctacaagcgttctgtggagttgaacccaacacagaaagatcttgtattgaag
attgcagagttactatgcaataatgatgttactgatggaagagcaaaatactgggttgac
agagctgctaagctctttcctgggagccctgctatttacaggttgaaggagcagttactg
gattgtaaaggtgaagatgggtggaatcagctttttgacttgattcaagcagaactttat
gcaagaccagatgatatctacataaacatcagactagttgcactctatcgttcaaataac
agattaaaggatgctgtgctccactgtcaggaggcagagaagagaatacctttgcagtca
agcttggaatggtgttcctgtgttgtagagacatttgaggaatatctggaatctttacaa
gacttggagtatgataaaaataactggagaactatcaagaaagatcatctgctggcctat
tccagctttgtcaaactgagactttcttctagagatgttcaggagtgcagagaggcactt
gaaagttttgatcgtgtgcttcagtcggtaaaaccatacgtgagcgtggctgacgagttg
tctcgtacctatgtggaaatgaaaggacagctgtacatgcatgctggagctttgctgctg
aaaatggcccaagacaatgagacacagtggagagctatgtgtgaactagcaacattgtgt
tatctcctgagttttcaggttcctaaaccaaagtcaaaactcataaagggggatcaaacc
ggacaagatatgctagaaatgttggcctgtgatcgaaaaagccagtctggtcatatgctg
ctgaacttaagtcatggcaagcaagacttctttaaagagattgtggaatcatttgcaaac
aagagtggctcatttgcattgtttgatagcctgtttgagagcggaacatctagagagagg
tcttttattggcacagatgatattggaaatgtcagtacacaagcaccagtgcaaatagaa
cttcacaaatacgatattggtgccattcgattgcacaatggcagtctccagcaccttgtg
tggcttggcttgcagtggaactctatgtcagtcttaccccccatgcgcaaatggttaaaa
cagctttttcacttgcctcaagaaacatcaagacttgagacagatgctcctgaatctatt
tgcctgttagaccttgaagtatttctacttggggtgatattcgctagcaacttacaactg
caagagaagtttaattctcactacagtgcacatcagcctcaattcttaccattgccaata
tgcaaacaactctatactgaaaagcaaagatcctggtgggatgctgttcgtactctcctt
cagagaaaatcagtaccaggaacagcagcaaagctgaggcttattgtacagcatggcata
agtactctgcgaacactggacaagcatggccttcaacctgccttaatcatatactgggca
aaaagcttgcagaaaacaggaattaaccttaactccttctatgaccagaaggaatatatt
ggacgaagtgtctactactggaagaaagttctgcctatgctggaaattatcaaaaagagg
aggagtatttctgaacctactgatcctctcttcaaacacttccacagtgtagacattcag
gtccttcaggttgcagcatatgaagaagaggcacagatagcatttgctatgttggatgca
gttgacggcaaaactgatgatgctttaatagcatttgaagctattgagaatgtagtgtca
tactggaatcttgccatgatattccaaagaaaagcagaagagattgaaaatgatgtcatg
ttgccagaagaacatgaggagcataaaacttaccttcttaaagccaaatattacctaatg
aaaattattgcggaaagctcctcggatatgtcagttactgagaaattgccagtgtctctt
gaaactgtgagagaagtgttagatacagtgatccaggaacttggtgagaatggtgaagag
ggaagtcttgccttcagaaatggtctgccacgaactgtagattcagcaatgaaacattcc
actccgtcaccaaccaaattctctttttcgccaactaagacctacaagttctctccgaaa
actccccctcagtgggcagaagaccataaatctatacttcaaatgatttgtcagcaagtg
gaagctttaaagaatgaaatgcaagaaatgaaacttaataattccaacacaaatgcatct
cctcggtggcctgctgaaaactatggaactgatgcaataccagacaattaccagagagca
caaaatcttcatgaagcccctttaacagttgctaccactggcccatctgtgttctacagc
cagtcacctgcctataactctcagtatcttctgggaactgctgcaactaatgtaacacca
gcaaagcctcctgtctatggcatgaaccgacttacgcctcagccacatatatattcctat
cagccaccacccatgcatactccacctttgcaaaacacttctggttgtatgttttctcaa
gaaatgtatggcccacctctgcgttttgattctcctggtactacactaatttctcctcgt
acagctgatgactattacaactacagcgttccacaggcaagcaccaatccaacactacct
aaaccagggtatttcacaaaccgttcagtcacaccacccactttaaagcctgcagaacca
aaagcaatgcctaaatttggacagccgggaacagcagaaggatcaaaaccacctctgcca
acaccagcacagccaagtcagccgacaacttttaagtttaaacctaacttcaagtctaat
gatggggacttcactttttcttctccccctcaagttgcaccacaacctcttaatgcacct
tttaatagtaaagaaagcctcttggatcttctaacatctgataaacctttagaggatgat
agatatgttgaacaaaagccagttagcgatcccacaaacagttcaagaaatatcttcagt
tttagtaataaacatattccaggcatgtctcttcgagaaaacatgggacaaaatgcacac
aaaaacctgggtgttgagaagagtgatgcatttggggttcaagaaccaagtaagcctgta
tttatagcttcaaattcagatttggccaatagaagtcatgaaacagagggaggaagcacc
catggtggagatgaggatgatgatggtcctcattttgatcctgtggtgccacttcctgat
aagattgaagtaaagacaggtgaggaagacgaagaggagttcttctgcaacagaggcaag
ctcttccgttttgatgcagactctaaagaatggaaagaaaggggtattggaaatgtaaaa
atactgaaacataaagtatctggcaaatttcgtctcttaatgagacgagaccaagtgctg
aaaatatgtgcaaatcactacataaatactgatatgaaattaactccaaatgctgcctca
gagaagtcattcgtgtggcatgctttagactatgcagatgaattgccaaagccagagcag
cttgcaattagatttaaaacacctgaagaagcaatgctcttcaaaaaaaagtttgaggag
gcacaaaatattttaaaatccttgggatcaaatgctgatacgtctgtggctcaaagtagt
gggactgcaaaagaaacagcaaatcaggacatcaaggagtccaacagaaccacttctggg
accatgaacttgggctttcagtttctaaaagatggaacaagcagtgaacgtgacagcaaa
ggcacccttacagctacatccactgcatctagcactaccatttcatttgggaaggatgct
cagcaagcctgttcttctggtgggtttgggcagcatctcttgaagaaggaccaatgggag
tgtaaagtatgtttagttctaaatgaagcaactgtaaagaattgtgtagcatgtcaaagt
ccaaatccaagtatgtgggaaacacatggcaccccattaactggctctgcaagtctgaaa
gcaagtggtaacacagtgcaggacaagtttggatctgcttttgctaaaaaggaaggtcag
tgggactgctctgtatgcctaactcaaaatgaagcaaaatatgtgaactgctgttcttgt
cagagtccaaaacctcaaaatcaaccaaatacatccacaccctctgttcaggcatctgtt
gcactggggcttggttccattgctgatacaagtaagccacagaaaaatgggtttgaaggg
ctttttactaagaaggaaggtcagtgggattgtactacttgtcttgtgaggaatgaaggt
tcttcactagcctgcgtagcctgcgaaacgcctaatccatctggtaaaccagctggtgat
actttgccagctcctgcttttggcttgaaaagtaaattgcctgaccttgatggaggacag
ttgcgaacaggctttaagtttggtcttgagcaaggcaagacaccaccatttacgtttcag
gtttcttctgatactgaagctaagcctgcaaaggaaggatttagcttttcaatgcaaatg
cctgcagatggatttaaatttggaatacaggaatctagtaaaaatacccctaagaaagat
gagccatccaaagagcctatgactggtttcttaaaaagcattgatgaaaaagacaaaaag
gaactgccttcagacagtggaactggattccaatttcaagaaacagcagacaaggagaaa
attgactttgtgtttgggcaaaataacagcacttctacttttgctgagcatgcaaaaaat
attcctagggaaggctttcaatttggcaaaaaggaccctaacttcaaaggcttttcagga
gcaggtgaaaagctgttttcttcacagaattctaaaacagatcagaaggcaaacacatct
gctgaccttagcgagaaggatgatgatgtgtataagacagaggacagtgatgatatccat
tttgaacctatagttcagatgcctgaaaaagtagaaccgtttacaggagaggaagatgag
aaagtgttatactcccagagagtaaagctgttcaggtttgatccagaaacaagccagtgg
aaagaacgtggggtgggcaatctgaagattcttaaaaatgaagttaatggcaaagtaaga
atactgatgcggcgtgagcaggtactgaaggtctgtgcgaatcactggataacgacaaca
atgaacttgaaacagctgtctggctcagacaaagcatggatgtggatggccaatgacttt
tctgatggtgatgcaaagctggagcatctggcagcaaaattcaagacaccagagcaggct
gaggagttcaaacagaaatttgaagaatgtcagaggctactacttgatataccactgcag
acaccccataaacttgttgatacaggtaggacagctcagcttatacagagagcagaagaa
atgaagtgtggcttaaaagatctcaaaacttttctgacagatgacaaaactaaactgtca
gaagaggaaagtgtaaaccccgtttgtaccagcagtacttctgatttggttataaagcca
catgctgaaagtacaggccctactctggagtgggataattatgacttgcgtgaagaagca
ttagatgatagtgtaagtagttctgtatacgcatcgcctcttgcaagtagccctgtaagg
aaaaatctgtttagatttggagagtctaccactggttttagtttcagctttaaatctgct
ttgagcccatctaaatctcctgccaaacagaatcagagtagaacatcagtcggcacagat
gaagattctgatgttactcaagaagaggaaagagatggacagtactttgaacctgtggta
cctctgcctgatcttgtggaagtgaccagtggtgaggaaaatgagcaagttgtcttcagt
catagagccaaactctacagatatgacaaagatgcaaatcaatggaaagagagagggatt
ggggatatcaagatattgcagaactatgacaacaaacaagttcgtatagtaatgagaagg
gaccaggtactaaaactctgtgccaatcacaggataacaccagacatgaatatgcaacaa
atgaaaggatctgatagagcctgggtatggactgcatgtgactttgcagatggggagaga
aaagtagaacttctggctgtgcgattcaagctgcaagatgttgcagactcatttaagcaa
atttttgatgaagcaaagcatgcccaagagagagagacactgataacacctctttcttct
cgtgccaatacaccaaaggaatctccatgtggcaaaaatgctgtagctgtgctagaagaa
acaaccagagaaagaactgataccaactatggtgaagatacttctgacacaactatagag
gctgcagaggtgtcaaatacttctgaaacatcaacaaaaacagtggtttctcctccaaag
tttgtatttggctctgaatcagtcaagagcattttcagtaatgaaaagtcaaagacgttc
acatttggaaatacttcagccactggttctctctttggcttcagttttaatcccccaaga
aagaatgaaggccatattccagcatctcagaacacagcacagaaagagatggaagtctct
gaaccaccaaaaataacaaatgctactcagaagcctgtagacagcaaggtagacaacttt
ccagcttcaacacaagatggaccgtctaacttctcatttagaattctggaaaaaggattt
aattttagcctctttaaatctaaccccatggccttttggacaagcacatcctccatgcaa
cctggtagtaaagctgagaagaccacagtgccagaggatgatgttccatctgatgaggtt
gtaatagtttatgagttgacacctactcctgaacagagagctcttgctgacttcctcaaa
ctcccttcaacatttttctgttacaagaataagcctggatatgtgagtgatgaggatgat
gatgaagactatgaaacagctgttaaaaaacttaatggaatactctatcctagtgattca
aaagagaaaaagaaagggcaaggtcccgtaaaagcaggccttgcaagaaaaagtgaattc
aacactgaaagagaatgtgctgctactttggaaaagaaaccagctcctgaggaaaaagat
gaaacaaaagttctgcatgttccttttacatctgtttgtggtgtcagtactgatgctgaa
ggcaacagtctaaaagacttaaagtcagaagctaaaattcaagaaatgaaagagaatgaa
gttgtaagctcaagtgacgtagtgtctaccagtaaggaagaaatacctgctccatcaaaa
gatgaagtgacagtatgtgtccaatcaggttccagcagtgaagaatcacattccaccata
gaaactgtgcaagtatcacagacctcatcacgagctgaagacaaacctgtagatttgtca
actaaaaagagcgattcagatggttcagagtcaacacaagaaaacagaatcatctcattt
ggttttgggaatactgcaggcctgtcatttgcagatctggcatccaaaagttctgaagac
tttgcttttggctcgaaagataaaaacttcaaatgggcaaatacaggagcaactgtgttt
ggagataccacccataaagacgaagatggtagtgatgatgaggtagtacatagtgatgat
atccactttgagccaattgtgtccttaccagaggtggaggtaaaatctggagaagaagat
gaagaaattctcttcaaggagagggcaaaactttacagatgggacagagatgttactcag
tggaaggagcgcggtgttggggagatcaaaatactcttccatacacagaagaaatactat
agaatcctaatgagaagagatcaagttcttaaagtctgtgcaaaccatgttatcaccaaa
gaaatgaacttggttccctctgatacatcaaacaatgctttcatttggacagccacagat
tatgctgatggtgaagtgaaagtagagcaatttgcagtcagatttaaaagtcaagaaatg
gctaattctttcaagaagatgtttgaagaatgccaattaagcttgtcagaactacagaag
gggcacttgtctttagcagcaggactgtcaaaggacaccaaccctgttgtatattttgaa
gtttctgctgatggtgaacctttaggacacataaccatggagctgtttgcaaatattgta
cctcgaactgctgaaaatttcagagccctgtgcacaggagagaaaggatttggattcaag
aactcccgctttcacagaatagtcacagactttgtgtgtcagggaggagatataactaac
catgatggaacaggtggacggtcaatttatggaacagcatttgaagatgagaatttcaca
gtgaaacacactggtcctggattgttgtcaatggcaaataagggcagggatacaaataat
tctcagttcttcataacacttaaaaaagcagaacacttggacttcaagcatgtggtattt
gggtttgtgaaagatggaatggatgttgtgaaaaagatcgaatcctttggttctcctaaa
gggctagtaaatggaagaattgtcattacagactgtgggcaaatatag
DBGET
integrated database retrieval system
