Taeniopygia guttata (zebra finch): 100221908
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Entry
100221908 CDS
T01082
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100221908 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100221908 (ABCB1)
04147 Exosome [BR:
tgu04147
]
100221908 (ABCB1)
04090 CD molecules [BR:
tgu04090
]
100221908 (ABCB1)
Enzymes [BR:
tgu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100221908 (ABCB1)
Transporters [BR:
tgu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100221908 (ABCB1)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100221908 (ABCB1)
CD molecules [BR:
tgu04090
]
Proteins
100221908 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
Zeta_toxin
RsgA_GTPase
AAA_5
AAA_29
AAA_28
AAA_15
AAA_30
G-alpha
AAA_14
nSTAND1
AAA_19
Motif
Other DBs
NCBI-GeneID:
100221908
NCBI-ProteinID:
XP_004186266
Ensembl:
ENSTGUG00000001378
LinkDB
All DBs
Position
2:complement(21353099..21400705)
Genome browser
AA seq
1295 aa
AA seq
DB search
MHSEDEKKYTEDGNSHGIAASSQGHELEDKDKAKKKQKKGEKPKVVSPFTLFRYSSWSDK
LLMILGTLLAIAHGSSLPFAMIIFGDMTDSFVSSGDKNPTGNFSQNFTSDMLHKLEEDMT
RYAYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWFDVNDVGELN
TRLLDDVSKINEGIGDKIGLLVQSLTTFVTGFIVGLIRGWKLTLVILAVSPVLGLSAALW
AKVLSAFTDKEQAAYAKAGAVAEEVLAAIRTVIAFGGQEKEIKRYHKNLEDAKRIGIRKA
ITANISMGAAFLLIYASYALAFWYGTTLILNDDYTIGKVLTVFFSVLIGAFSIGQTAPSI
EAFASARGAAYTIFNIIDNEPQIDSYSETGYKPDHIKGNLELKNVYFNYPSRPDVEILKG
LNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTITIDGQDIKTLNVRYLREVIGV
VNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETVVGERGAQLS
GGQKQRIAIARALVRNPKILLLDEATSALDTESESVVQAALDKAREGRTTVVVAHRLSTV
RNADVIAVFEGGVITELGNHAKLLEKKGIYYKLVNMQAVEAEVPSSENYENVLPPSENYE
NVYSVKNSEFEPESEESLTRGLRRRSTRRSMKKPGEQNYSPDEEKTSPAEELPPASFLKI
MKLNKTEWPYFVAGTLCAIINGGLQPAFAVIFSEIIGIFSETDKDVLRKQSNLYSLLFLA
LGIISFFTFFFQGFTFGKAGEILTMRLRFMAFKAMLRQDMAWFDNPKNSTGALTTRLAND
ASNVKGATGVRLALIAQNIANLGTGIIISLIYVWKLTLLLLAVVPIIAVAGMIEMKMLAG
HAKKDKRELEAAGKIATEAIENIRTVVSLTLERKFELMYGEHLILPYRNSVKKAHIFGFC
FALSQAMMFFTYAGCFRFGAYLVVNDHTEYKRVFLVFSAVVFGAMALGQTSSFAPDYAKA
KISAAHLFLLFERVPSIDSYSEEGDKPETFEGNITLKDVAFNYPNRPEVKILQGLNLKVE
KGQTLALVGSSGCGKSTVVQLLERFYDPLDGEMIFDGKNAKALNIQWLRAQIGIVSQEPI
LFDCTIAENIAYGDNSREVSFEEIVSAAKQANIHSFIDSLPDKYNTRVGDKGTQLSGGQK
QRIAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNAD
KISVVQNGRVVEQGTHQQLLAEKGIYYSLVNVQSG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaagatgagaagaagtataccgaagatggaaatagtcatggaatcgctgct
tccagccagggtcatgaattagaagacaaagacaaggcaaagaagaagcagaagaaaggt
gaaaaacctaaggtggtcagccctttcacactgtttcgatactccagctggtcagataaa
ttattaatgatactaggcactctgctggcaatagcccatggaagcagtctcccttttgcg
atgataatttttggtgatatgactgatagctttgtttcatctggagacaaaaatcctaca
ggaaatttttcacagaatttcacttcagatatgcttcacaagctggaagaagatatgaca
agatatgcatactactattctggaatagcagctggtgttcttcttgctgcttatattcag
acttcattctggaccttagcagcaggtcggcaaataaagaaaattagagaaaaatttttt
catgcaattatgagacaggaaattggatggtttgatgtaaatgatgtgggagaacttaac
actcgtcttctagatgatgtctccaagattaatgaaggcataggtgacaagattggattg
cttgttcaatcactaacaacatttgtgacaggatttattgttggtctcataagaggatgg
aaattaacccttgtaatactagcagttagccctgtcctgggactttcagcagccctctgg
gcaaaggttctctctgcattcactgacaaagaacaggctgcgtatgcaaaagcaggtgct
gttgcagaagaagttctggcagcaatccgtactgtaatagcttttggaggacaggaaaaa
gaaattaaaagataccataaaaatttagaagatgctaaacggattggaataagaaaggct
attacagcaaatatttctatgggtgctgctttcttactgatatatgcatcatatgcactg
gcattctggtatggaactactttgatcttaaatgatgattacactattggcaaagttctt
acagtctttttctctgtattgattggagctttcagcattggacagactgctccaagcata
gaggcatttgcaagtgcaagaggagctgcctacaccatctttaatataatagacaatgaa
cctcaaattgacagctattcagagacaggttacaaaccagaccacataaaagggaacttg
gaattaaaaaatgtttacttcaattatccatccagaccagatgttgagatactgaagggc
ttgaatctcaagattaattctggccagacagtggccctggttggcggcagtggctgtggg
aaaagcacaactgttcagctcatccagagattttatgatcccaaggaaggcacgattacc
attgatgggcaggatattaagaccttaaacgtaaggtatctgcgggaagttattggtgtg
gtgaatcaggagcctgtgctctttgccactactattgcagaaaatatccgttatggccgt
gaggatgtcaccatggaggagattgaaaaagccaccaaggaggcaaatgcttatgacttc
atcatgaagctacccaataagtttgaaactgtggttggagaaagaggggcacagctcagt
ggaggccagaagcaaagaatagcaattgccagagctctggttcgcaatcctaaaattctt
ctgcttgatgaggcaacatcagctttggatactgagagtgaatcagttgtgcaggcagca
ctggacaaggcaagggaaggacgcaccacggttgtggtagctcatcgactgtcaacagtc
cgaaatgcagatgtgatagctgtgtttgaaggtggagtaatcacagagctaggcaatcat
gctaaattgctcgagaaaaagggaatctactacaaactcgttaacatgcaggcagtagaa
gctgaagttccatcatcagaaaattatgagaatgtacttccaccatcagaaaattatgag
aatgtatatagtgtcaaaaacagtgaatttgaaccagaatctgaagaatccttaactagg
ggattgagaagacggtcaactcggagaagcatgaaaaagccaggagagcaaaattatagt
cctgatgaggaaaaaacttcacctgctgaagaactacctccagcttcatttctgaaaatt
atgaagttgaacaaaactgagtggccatactttgtagctggaaccttgtgtgcaattatc
aatggaggtttgcaacctgcatttgcagtcatattttctgaaattatagggattttttca
gagactgacaaggatgtcttaagaaaacagagcaacttatattcactgctgtttttagca
cttgggatcatttccttttttactttcttttttcagggtttcacatttggcaaagctgga
gaaattcttacaatgaggcttcgattcatggcatttaaagcaatgcttagacaggatatg
gcctggtttgataatcctaaaaatagcactggagcattaactacaagacttgctaatgat
gcctctaatgtgaaaggagcaactggtgtcagactagcattaattgcccaaaacatagcc
aacctggggactggaattattatatcattaatttatgtctggaagctgaccctgctactt
ttagctgttgtgcccatcattgcagtggcaggaatgattgaaatgaagatgttggctggg
catgctaagaaagataaacgagagctggaagctgcaggaaagattgccacagaagcaata
gaaaatattagaactgttgttagcttgacactagaaagaaaatttgagttgatgtatgga
gaacatctgattctaccctacagaaattctgtgaagaaggcacatatatttggcttttgt
tttgccctttcacaagcaatgatgttctttacctatgccggctgtttccggtttggtgcc
tatctagtggtaaatgatcacacggagtataaaagagtatttttagtgttttcagctgtt
gtatttggtgcaatggcactaggacaaaccagttcttttgctccagactatgccaaagcc
aagatatcagcagcccacttgtttctgctgtttgaaagagtgccctcaatagacagttac
agtgaggaaggagacaagcctgaaacatttgagggaaacataacactgaaagatgtggca
tttaactacccaaaccgaccagaagtcaaaatcctgcaagggttgaatctaaaagtagaa
aagggacaaactctggctcttgttggcagcagtggctgtggaaagagcactgttgttcag
ctgctggagagattttatgacccacttgatggagaaatgatttttgatggcaaaaatgca
aaggcactgaatatccagtggttgagagctcagattggtattgtctcacaagaaccaatc
ctgtttgactgcactattgccgaaaacatcgcctatggagataacagccgggaggtgtcc
tttgaggaaattgttagtgcagcaaaacaagccaatattcattccttcattgactcactg
ccagataaatacaacacccgtgtaggagacaagggaacccagctttctggtggccagaaa
caacgcatcgcgattgcccgagctcttgtacgcaagccccaaattctgcttctggatgaa
gctacttctgccttagacacagaaagtgaaaagattgtccaggaagcgctggataaagct
cgagaaggtcgcacgtgcatcgtgatagctcaccgcctctccaccatccaaaatgctgac
aagatcagcgtggtccagaatggcagggtcgtagagcagggcacccaccagcagcttctg
gctgaaaaaggcatctactattccctggtcaatgttcaaagtggctaa
DBGET
integrated database retrieval system
