Taeniopygia guttata (zebra finch): 100223323 Help Entry 100223323         CDS       T01082                                  Symbol COL5A2 Name (RefSeq) collagen alpha-2(V) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tgu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     100223323 (COL5A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tgu00536]     100223323 (COL5A2) Glycosaminoglycan binding proteins [BR:tgu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100223323 (COL5A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  100223323 NCBI-ProteinID:  XP_002191994 Ensembl:  ENSTGUG00000010924 LinkDB All DBs Position 7:25404275..25501009 Genome browser AA seq 1496 aa AA seqDB search MMAVLVQTRTFFILAALLGRFVTIKAQEVEEYEGGEDGEEIACTQNGQMYLNRDIWKPSP CQICVCDNGAILCDEIQCQDLLECENPQVPPGECCPVCPHTPRDFDPTIGRGRKGQKGEP GAVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGH PTHPGPDGISRPFSAQMAGLDEKSGLGSQMGLMPGAVGPVGPRGPQGLQGKQGGAGPTGP PGEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGL KGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGPTGPLGPRGMPGERGRIGPQGAPGGRGQ HGMPGKPGPMGPLGITGSPGFPGIPGIKGEAGPTGPRGPEGPQGQRGQTGPQGPAGSQGL PGAEGTDGSPGAKGPTGSPGTGGPPGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGE AGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR PGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE RGEPGASGIQGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGD RGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGE NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSHGPPGPPGVPGLKGG RGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP TGPPGGPGDKGDPGDDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK QGPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL PGSPGGPGTPGPVGPPGDAGQRGETGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGD RGQKGHRGFTGLQGLPGPPGPVGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGLPGPIGP PGVRGTVGEAGPEGPPGEPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAP DDHNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKRSGEYWIDPNQG CVEDAIKVYCNMETGETCISANPSTVPRKTWWASKSSDLKPVWYGLDMNRGSQFVYGDTA VTQMTFLRLLSKEASQNITYLCKNSVGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRY TVLHDSCSKRNGNVGKTVFEYRTQNVARLPIIDIAPVDIGSTDQEFGIEIGPVCFV NT seq 4491 nt NT seq  +upstreamnt  +downstreamnt atgatggcagtcttggtacaaacgagaacttttttcatcctcgctgctttattaggccga tttgtaaccataaaagcgcaagaagtggaagagtatgaaggtggagaagatggtgaagaa atagcctgcactcagaatggacagatgtacctgaacagggatatttggaagccctcaccg tgccaaatctgcgtctgtgacaatggagctattctttgcgatgaaatccagtgtcaagat ctgctggagtgtgagaacccccaggtgcccccgggagagtgctgtcctgtgtgtccccac acaccacgggatttcgaccccaccatcggtagaggaagaaaggggcaaaaaggagaacct ggagcagtgccacctgtttcaggcatacgaggccgccctggaccagccggacctccaggc tcacaaggtccacgaggagaacgaggaccaaagggaagacctggtcctcgtggtcctcaa gggattgatggggaacctggtatccctggccagcctggtgaccctggtcctccagggcat cccactcacccaggaccagatggaataagcaggcccttttcagctcagatggcaggactg gatgagaagtctggacttggtagtcaaatgggactgatgcctggtgcagtgggtccagtg ggtccaagaggtcctcagggtctccaaggaaaacaaggtggtgctggtcccacgggccca cctggtgaacctggagatccaggacctatggggccagttggttctcgtggaccagaggga cctccaggcaaacctggtgaagatggtgaacctggtaggccaggacaatccggtgagcct ggatttccaggatctccaggccctcgaggctttcctggtgctcctggtctcccaggtctc aagggtcaccggggattgaaaggacttgatggtccaaaaggtgaaattggagcagctgga gcaaagggagagtccggaccgactggagccatgggtccaacaggtcctctaggacctagg ggaatgccaggagaaagaggacgaattgggccacagggtgcccctggtggacgtggccag catggtatgcctgggaagccaggcccaatggggccacttggtataactggatctccaggt tttcctggtattcctggcataaagggtgaagcaggtccaacaggtcctcgaggtcctgaa ggtcctcaaggacaaagaggtcaaacaggtcctcagggcccagctgggtcacaaggtctt cctggtgctgaagggacagatggttcccccggtgcaaaaggccctactggatctccaggc actggaggcccccctggattatcaggcccccctggttccccaggaccacagggcagcact ggtccccctgggattcgaggccagccgggagaccctggtgtcccaggtttcaagggagaa gcaggacccaaaggtgaacctggtccacaaggtccccagggtcccattggccccataggt gaagaaggcaaaagaggtcctcgaggtgatccagggtcagtaggtccaccgggccctgtt ggagagaggggtgctcctggtaatcgtggttttccaggttctgatggcttgcctggacca aagggagcccaaggagagcgtggtcctgcaggatcttctggacctaaaggaggtcaggga gatcctggacgtcctggtgaacctggccttccaggtgcaaggggtttgacaggaaatcca ggtgttcaaggccctgaaggaaaacttggccccttgggtgctcctggggaagatggacgt ccaggtccagcaggttccataggaattagaggtcagccaggcagcatgggccttcctggg ccaaagggtagcagtggtgatcctggaaaacccggagaagcaggcaatgcaggagtccca ggacagagaggagcccctggtaaagatggtgaagttggcccttctggtcctgttggccca ccaggtctggcaggagaaagaggagaacaaggccctccaggtcctacggggtttcagggc ttgcctgggccaccaggtcctccaggtgagggaggaaagccaggtgatcagggtgtgcct ggagatcctggagctgttggtccattgggccccaggggagaacgtggcaatccaggggaa aggggagaaccaggtgcctcaggtatccagggtgaaaagggtatggctggaggccacggt cctgatggcccaaagggaagcccaggccctagtgggacacctggagatccaggaccacca ggccttcagggcatgcctggagagagagggattgctggaacacctggccctaagggtgat agaggcggtgtaggtgagaaaggtgctgaaggtacagctggcaatgatggggcaagaggt ctccctggtccaataggcccaatgggtccagcaggtcccactggtgaaaagggtgaacca ggtcctcggggtctagttggtcctcctggttctcgtggaaaccctggttctcgaggagaa aatggcccaactggcgctgttggttttgctggccccccgggccctgatggtcagcctggt gtgaaaggtgaacctggagaacctggacagaaaggagatgctggatctccagggccacag ggtcttgctgggtctcatggtcctccaggccctccaggtgttcctggtctgaaaggtggt agaggaactcagggtccacctggtgctactggattcccaggatctgctggaagagtgggg cctccaggacctactggagccccagggcctgctgggcctattggtgaaccaggaaaagaa ggtcccccaggacttcgtggtgatcctggttctcatggccgtgtgggagaccgagggcca acggggcctcctggtggccctggggacaagggtgacccgggggatgacgggcagccgggc ccagatggcccccctggtccagcaggaactactggtcaaagaggaattgttggaatgcca ggacagcgaggcgagagaggcatgcctgggctgccagggcctgcaggtactccaggaaag caaggtcccacaggaccaccaggtgacaaaggtcccccaggacctattggccagtcaggt gccactgggcctgtaggtgaagctggtccagaaggacctgctggtaatgacggtacccct ggacgagacggagctgttggagaacgtggtgatcgtggtgaacctggccctgcaggctta ccaggttctccaggaggcccaggaactccaggtcctgttggccctccaggagatgcaggt caaagaggtgaaactggttctcgaggtccaatgggtcccccaggccgtgcaggaaaaaga ggtttgcctggtccccaagggcctcgtggtgacaaaggtgacaatggagatcgaggtgat aggggccaaaagggacacaggggtttcactggacttcaaggccttcctggtcctcctggt ccagttggtgaacagggtagtcctggcattccaggcccatttggtcctcggggtcctcca ggtccagttggtccttctggaaaagatggaagtcctggtctacctgggccaattgggcct cctggtgttagagggactgtgggagaagctggacctgagggcccaccaggtgagcctggt cctcctggtcctccagggcctccaggccacctcactgctgccatcggtgacatcatggga cactatgacgatgccatggcggatccactaccagagtttactgaagatgaagcagcccct gatgaccacaataaaacagacccaggagtccacgccacgctgaagtccctgagcagccag atcgagaccatgcgcagccccgacggctccaagaagcacccagcacggacctgtgatgac ctgaagctgtgccacccctccaagaggagcggtgaatactggattgatcctaaccaagga tgtgttgaagatgctataaaagtgtactgcaacatggaaactggggagacctgcatttct gctaacccatccactgtgccccgcaaaacatggtgggccagcaagtcctctgacttaaag cctgtttggtatggccttgatatgaacaggggatcacagtttgtgtacggggatacagct gtcactcagatgacattcctgcgcctcctgtccaaggaagcttcccagaacatcacctac ctttgcaaaaacagtgttgggtacatggatgaccagacgaagaacctgaaaaaagctgtg attctgaaaggggccaatgacctggagatcaaggcagagggaaacagccgcttcagatac actgttctgcatgacagctgctctaaacgtaatgggaatgtgggcaagactgtttttgag tacagaacgcagaacgtggcacgcttacccatcatcgatattgcaccggtggacattggc agtactgaccaggaatttggaattgaaattgggccagtttgctttgtgtaa

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