Taeniopygia guttata (zebra finch): 100223976
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Entry
100223976 CDS
T01082
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100223976 (WDHD1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100223976 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
Ctf4_C
WD40
ANAPC4_WD40
HMG_box
eIF2A
Nup160
NBCH_WD40
RMC1_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100223976
NCBI-ProteinID:
XP_002200443
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All DBs
Position
5:58613705..58640792
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AA seq
1125 aa
AA seq
DB search
MPLKQKPMRYGHSEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTMPVNHVTFSPDGTKVAAGSGDFMIKV
VEVTDSSKQKTFRGHDAPVLSLSFDPKDVYLASASCDGSVRVWNIADQTCTTSWLLLQKC
NDVINAKSICRLAWQPGSGKLLAVPVDKVVQLFRRETWDSQFDLSDASITQPLNVVVWSP
CGKFLAAGSVDGNLVVWNVETQQCIERMKHEKKYSICGLAWHPKYKQIAYTDNEGNLGLL
ENIGDVEKPNDKVASAVAKDYNDLFDGDDDDYLNGDMIEPPPSPKTGDNEDDADDLMQPP
GHMRRALIDDDDDDNSLDIGLIKASSGLLEKEDDGDDQPGGFSALPPSSTQQPFYDGPMP
TPRQKPFQSASTPVHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSVHHATHLPNSLG
HTMADLSTEAILLACESTEELGSKLHCIHFGSWDANKEWTVDMPKDEEIEAICLGQGWAA
CATTALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMVVYHRGTGFDGDQCLGVQLMEL
GMKKRQILHGDPLSLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGFGNTWIPVCNTRE
HCKGKYDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFKLPYCQVETEKGQME
EQYWRSVLFHSYVDYLSKNGFEFDENAKNQAVKEQQELLMKLFALSCKLERESRCVELAE
LMTHSVLNLAIKYASRSRRLNLAQLLSEVAVEKASELAAAQEDEEEEEDFRKRSNAGSSS
SATKWGQLPGRNVQQDQEVEDAEDTDACEEAEETPEVHKEKEPNCFSKGVPSAEVTTPKP
ALVASSSRGRVNPFKVSSSKKDPVVPSGNVLDNMTKYSKKTSLSGSRAVDKQNPSVIKPL
TPKPKTKQASAASFFQPRTPATNPGEKTVEEKEQKAGNESQEAKVTAQENTENRRPKTGF
QMWLEENRANILTDNPDLNEAEVIKEGMSRFRMLTSEERMVWTEKAKGRVSDSAEDKKRK
RPTAEEDEVEKSQEQKSEDTNASKKSKPLDPSPNNRLSAFAFKQS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccattgaagcagaagccaatgcggtatggccactccgagggacacaccgatgtctgc
ttcgatgacaccggcagctgcattgtgacttgtggcagtgatggagatgttagaatttgg
gaaaacctggatgatgatgatccaaagtccattaatgtgggagaaaaggcctactcatgt
gctctaaagaatggaaggctgatcacagcagtgtccaacaacactgtccagatccacaca
tttcctgagggagctccggatgggatcctcactcgtttcaccatgcccgtcaaccacgtc
acctttagtcctgatggcaccaaagttgctgctggatctggtgactttatgatcaaagtt
gtggaggtgactgatagcagcaagcagaaaacattccgaggacacgatgctcctgtttta
agcctgtcttttgaccccaaggatgtttacctggcctcggcgagctgtgacggttctgtc
agagtctggaacattgcagatcagacatgcacgacaagctggctgctgctgcagaaatgt
aatgatgtaataaatgctaaatcaatctgcaggcttgcctggcaacctggcagtggcaag
ctgctggcagttcctgtagataaagttgttcaactgttcagaagagagacctgggatagt
caatttgatctatcagatgcctccatcacacagcccttgaatgttgtggtctggtctccc
tgtgggaagttcctagcagctggaagtgtggatgggaatttagtggtgtggaatgtggaa
acccagcagtgcatagagaggatgaagcatgagaaaaaatactcaatttgtggactggca
tggcaccctaaatataagcaaattgcttatacagacaatgaaggaaatctggggctgttg
gaaaatattggtgatgtagagaagccaaatgacaaggttgccagtgcagtggccaaagac
tacaacgatctgtttgatggagatgatgatgattatttaaatggggatatgattgaacca
cctccttccccaaaaactggagataatgaggatgatgctgatgaccttatgcaaccccca
ggccatatgagacgggcactaattgatgatgatgatgatgataactcactagatattggg
ttaataaaagctagttctggtcttcttgagaaggaggatgatggtgatgatcagcctggt
ggcttttcagctttgccaccatcatctacacaacagcctttctatgatgggccaatgcca
acccccagacaaaagcctttccaatctgcctccactcctgtgcatctgatgcatcgattc
atggtgtggaattcggttggaatcattcgctgctacaatgacgagcaggacaacgccata
gacatcgagttccacgacacctctgtgcaccacgccactcacctccccaactccctgggc
cacaccatggctgacctctccactgaagccattctgctggcctgtgagagtacagaggaa
cttggaagcaagctccactgcatccattttggatcctgggatgccaacaaggagtggact
gtggatatgccaaaggatgaagagattgaggccatctgtctaggccagggctgggctgcc
tgtgccactactgccctgctggtccgtgtgttcacagttggaggagtccagaaagagatc
ttcagtctcccaggcccagtggtgtccatggcaggacatggagagcagctgatggttgtt
tatcacagaggtactgggtttgatggggaccagtgccttggggtacagctgatggagcta
ggaatgaagaaaagacaaattttgcatggagacccactttctctgacaaggaaatcctat
ttggtgtgggttggattctctgcagaaggtaccccttgttacgtggattccgagggaatc
gtgaggatgctgaaccgaggatttgggaacacttggattccagtgtgcaacaccagagag
cattgcaaagggaaatatgatcattactgggtcgttggcatccatgaaaatccccagcag
ctcaggtgcatcccttgcaaaggagcccggttccctcccaccctgccacgacctgctgta
gcaatcctgccttttaaacttccttactgccaagttgaaacagagaagggacagatggag
gaacagtactggcgttcagttttatttcacagctacgtggattacttgtcaaaaaatggc
tttgaatttgatgaaaatgctaaaaatcaggcagtgaaagaacagcaggaacttctaatg
aagctgtttgctctttcctgcaagctggagcgcgagtcccgctgcgtggagctcgccgag
ctcatgacccacagcgtgctgaacctggccatcaaatacgcctcccgctcccgcaggctg
aacttggcccagctcctcagcgaggtggctgtggaaaaagcctcagagctggcagcagca
caggaagatgaggaggaggaagaggatttccgaaagcgctcaaacgctggttccagcagc
tctgccaccaagtggggtcagctgccaggcaggaatgttcagcaggaccaagaagtggaa
gatgctgaagacactgatgcctgtgaggaagcagaagaaaccccagaagtgcataaagag
aaagagccaaattgtttctccaaaggtgtcccttcagcagaggtgactactccaaagcct
gctctggttgcatccagcagcagaggacgagtgaatccatttaaggtgtcatccagcaaa
aaggacccagtggttccctcaggaaatgttttagacaatatgaccaaatactcaaagaaa
acatctttgtctggcagtcgagctgtagacaagcagaacccttcagttataaaacctctg
actcccaaacccaagaccaagcaggcttcagcagcctccttcttccagcctcgcacacct
gcaactaatcctggtgaaaaaacagtggaagaaaaagaacaaaaagcaggaaatgagtcc
caagaagctaaagtcactgcacaggaaaacactgaaaacagaagaccaaagacaggtttc
cagatgtggctagaagagaacagagcaaacattttgacagataatcctgatctgaatgaa
gcagaagtaataaaagaaggaatgagtcgatttagaatgctgacatcagaggaaaggatg
gtgtggactgagaaagcaaaaggaagagtcagtgactcagcagaagacaaaaagcggaag
cgtcccacagctgaggaggatgaagtggaaaagagccaggagcagaaatccgaggacaca
aatgcatccaaaaaatccaagcctttagacccatccccaaacaacagattgtcagctttt
gccttcaagcagagttag
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