Taeniopygia guttata (zebra finch): 100224144
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Entry
100224144 CDS
T01082
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100224144 (TARBP1)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100224144 (TARBP1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
100224144 (TARBP1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100224144 (TARBP1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100224144 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
100224144
NCBI-ProteinID:
XP_030124128
Ensembl:
ENSTGUG00000010214
LinkDB
All DBs
Position
3:68241187..68273115
Genome browser
AA seq
1583 aa
AA seq
DB search
MEVVLADTLLARCGDRAALLRALSAPLSAERAEALRLLLQRLAAGGPAAAGEAEALRRAA
WEVALERCRPLLRGGEGAAGSGERARALRAARGALRHCVQLCGAPLAARLARDALAELAA
GGGAGAEEAAVEALAAAAPRLEEPELLSRCAAAALALVREEGEGEAAAALVAGRLLPALG
ANGAALPRVWEGLLGAGGAPRAGRALLALSALADALLPRGPAGPGLDARLCPRFWRLVQE
GLTERDALCRKRARYLLKRALDLSCGQRAELRCPPDGGHESSLFWWSAEKNEQLLQFWET
YILIMETLEGNQIHVIKPVLPKLNSLYELAISGDKECWLFHPSWHVCIYRRMFESENKTL
TKEGILHFLELYETKHLPNSPGFSEFVIGPLMDALSESSLYSRTPGQSIGACPPLGMRLQ
KFLATYLTLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALASIPACKVLGAEGLHAL
RDVLQCTMITHQILLRGAAQCYLLQTTMHLTDVEKVSFPEISSFLLSLRPEESLRRDTLL
WTELCSWLQENDRCFRKSVTSDFGYQETPSLCQYVHSLVGEYLKTPASERENCFMPDWFE
AKLVSTMILLAADMEQMKNKYSGKSNIEWTELEAFLNPLLDVLMKLGSNAYIPTLKTDKS
LQLLLKLLQTRSLKCSNTQDDEVLFFIWKSLVTPVESILEFVLRRLTTNELSTVGDLDRC
DLYLALIPEIVNLCLKVNLKKMPSIKNFLSSLINASIRNLRERNSEKEPKVKEQIRKVAS
MASLAAVCEIMDGELEVHLKSLPSVDALKKFISFSQLNEVLKKPSYIEEKNSLCEETSSK
GWGKIVACYVRDQWICRRFVFNSFATLAQGYEETSVMSLSTAERSKEILQSALEALSILP
SDQVSPVFDCMKVLVPKLLDSSEALCIETFDLAWKIISSLSNTQLIFWANLKAFVRFIFD
TEVLAVAASAKGQAYTKIKEIIFNLIDLSTTKTGVFNVVLSHCCQSWIFPTVDERSALTN
AFLNAGNYSELITEACVFGTVFRKDQRHIQDVHAFIENLGEKCAANVVTESTNRDDHYVR
ICAVKFLCLLDGSNILHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIKNRVWQTLL
VLLPKLNQNFLCGILDRVFQAGFSNNQASVKYFIEWIVILSLHKYPQFLGKFWDCFCYDE
EKLKKSICTFLSVLAHFDIILQNTSEKKPALKKALIVVLQWCFSHNFSVRLYALIALKKI
WGMCRMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLE
TIFYILPRLAELAEDEWISLSKFDRFTDIPLPAAFQWCHSRTELRDLKPSDWSQQDMGSH
LAETDSQTEWTDVQKKIIPWKNSTPSLDLETAFQDRAVKLGKSNSRLIVVASLIDKPTNL
GGLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPSQLVDYLQQKKTEG
YTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIRSLNV
HVSGALLIWEYTRQQVIKRKQQQ
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacacgctgctggcccgctgcggggaccgcgccgcgctgctg
cgggcgctcagcgcgccgctctccgccgagcgggcggaggcgctgcgcctgctgctgcag
cggctggcggcgggcgggccggcggcggcgggcgaggcggaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcggggcggggagggcgcggcgggg
agcggggagcgggcgcgggcgctgcgggcggcgcggggcgcgctgcggcactgcgtgcag
ctctgcggggcgccgctggcagcgcgcctcgcccgcgacgcgctggccgagctggcggcg
ggcggcggggcgggcgcggaggaggcggcggtggaggcgctggcggcggcggcgccgcgg
ctggaggagccggagctgctgtcgcggtgcgcggcggcggcgctggcgctggtgcgggag
gagggcgagggcgaggcggcggcggcgctggtggccgggcggctgctgccggcgctaggc
gcgaacggcgcggcgctgccgcgcgtctgggaggggctgctgggcgcgggcggggcgccg
cgggccgggcgggcgctgctggcgctcagcgccctggcggacgcgctgctgccgcggggc
ccggcggggccggggctggacgcgcggctgtgcccgcggttctggcggctggtgcaggag
ggcctgacggagcgggacgcgctgtgccgcaagcgggcccgctacctgctgaagcgagcg
ctggacctgagctgcggccagcgcgccgagctgcgctgcccgccggacggcggacatgaa
tcgagtctgttttggtggtctgctgagaagaacgagcagctcctgcagttctgggaaact
tacattttgataatggaaactttggaaggaaaccagatccatgttataaagccagtatta
ccaaaactaaacagtttatatgaacttgccatatcaggggataaagagtgttggctgttt
cacccatcgtggcatgtgtgcatttatagacgaatgtttgagagtgaaaataaaacattg
acaaaggaaggaattcttcattttctggagctttatgaaacaaagcatcttccaaattcc
cctggtttctcagagtttgttattgggccactaatggatgccctctcagaaagttccctc
tacagcaggacaccaggtcaatcaataggagcctgtcctcctttgggaatgaggttacag
aagtttttggctacttacctcactcttctcccagaagaagaaaaaggtagcttcctgtta
aaatttattcagaagatgacaagtaggcattggtgtgctgttcctattttgtttctttct
atggctttggcatctatccctgcatgtaaagtacttggtgctgaaggacttcatgcttta
agagatgttctccagtgtactatgattacacatcagattttgttgcgtggagctgctcag
tgctaccttcttcaaacgactatgcatttgacagatgtggaaaaagtgtccttcccagaa
atttcaagctttcttctgtcccttagaccagaggagtccctaaggagagatactctttta
tggacagagctttgcagttggttgcaagagaatgacaggtgcttcaggaagtctgtaacc
tctgattttggatatcaggagacaccatcattatgtcaatatgtgcacagtcttgtggga
gagtacctcaagacacctgcatctgaaagagaaaattgctttatgcctgactggtttgaa
gctaagcttgtctcaacaatgattctgttggctgctgacatggagcagatgaagaataaa
tacagtggaaaaagcaacatagagtggactgaactagaggctttcttgaaccctcttctg
gatgtcttgatgaaacttggcagtaatgcttacataccaacactgaaaacagataaaagc
cttcagcttctcttgaagttattgcagacccgttcgttaaaatgttccaatacgcaagat
gatgaagtgctgttctttatctggaaatctcttgtgacacctgtggagagtattcttgaa
tttgttctccgacggcttactaccaacgagttaagcactgttggcgacttggatcgttgt
gatctgtacttggctttaattccagagatagtgaatttgtgcttgaaagtaaacttgaag
aaaatgccatctatcaagaatttcctttcatccttgataaatgcatctattcgtaatctt
cgggagagaaattctgaaaaggagccgaaggttaaggaacaaatcagaaaagtagctagc
atggcttcacttgcagctgtatgtgagataatggatggagagctggaagtgcacctgaaa
tctctgccttctgtggatgctctgaagaaattcatttccttttctcaattgaatgaagta
ttaaagaagccatcttatattgaagaaaaaaatagcttatgcgaagaaacatcatctaaa
ggatgggggaaaattgttgcatgctatgttcgtgaccagtggatttgtcgccgttttgtt
tttaattcatttgcaacactggctcaagggtatgaagaaacttcagtaatgtcactgtct
acagctgaaaggtcaaaagaaatcctacagtctgcattagaagccctatctattcttcct
tcagaccaagtgtcacctgtgtttgactgcatgaaagtccttgttcccaagcttctggac
tcatcagaggctctctgcatagaaacatttgatttggcttggaaaattatatcctctttg
agcaacacacagctaatattttgggccaatctaaaagcttttgttcggttcatctttgat
actgaggttctagctgttgctgcaagtgcaaaaggtcaagcatataccaaaataaaagag
ataattttcaacctcatagatctgtccactacaaagactggagtcttcaatgtagtcctt
agtcactgttgtcagtcttggatatttcccactgttgatgagagaagtgccttgacaaat
gctttcttaaatgctggaaattatagtgaacttatcactgaggcttgtgtctttggaact
gtatttaggaaagatcaaagacacattcaggatgtgcatgccttcatagaaaatcttgga
gaaaaatgtgcagcaaatgttgttacagaaagtacaaatcgagatgatcactatgttcgc
atttgtgctgttaaatttctgtgcttgttggatggatcaaatatcttgcataagacattt
atggaagacattttcatcaaactactcgataaggatgaactggtatcaagatctagaaca
cgctattatgcaaactctttgcagcatagaattaaaaaccgggtgtggcagacacttcta
gttcttctcccaaagcttaaccagaattttttatgtggaattcttgacagagtgtttcag
gctggattcagtaataatcaggcatctgtgaaatacttcatagaatggattgttatcttg
agtctacataaatatccccaattccttggtaaattctgggattgcttttgctatgatgaa
gaaaagcttaagaaaagcatctgcacatttttatcagtgttggcccactttgacatcatt
cttcaaaatacctcagagaagaagccagctttgaagaaagctctcatcgttgttctgcag
tggtgtttcagccataatttcagcgtccgactttatgcattaatcgcccttaaaaaaatc
tggggtatgtgcagaatgctgcatgtagaagaatttgaagctctgacaccagttattgaa
tctagccttcaacaagtggaaaacatgcatggcacagggaatgccagaaggaactggcag
cgaatccaagatcatttcttctttgcaacatttcatcctgttgaggattatagtctagag
acaatattttacattcttccccgccttgcggaactggctgaggatgaatggatctccctc
tctaaatttgacagattcactgacattcctttgccagcagcatttcagtggtgccattcc
cgaacagaacttcgtgatctgaaaccaagtgactggtctcagcaagacatgggttcacat
ttggctgaaacagacagccagacagagtggactgatgttcagaagaagattataccctgg
aagaacagcactcctagcttagacttggaaacagcatttcaggatcgtgctgttaaactt
ggcaaatcaaacagcagattgattgtggtggcttcacttattgataaaccaaccaattta
ggaggtttatgtcgtacaagtgaaatatttggggcatctgcactagttgttggcagtctt
cattatatacaggataagcagtttcagcatctgagtgtttctgcagagcagtggctcccc
cttgtcgaggtaaaaccatctcagcttgttgattatttacagcagaaaaaaacagaaggc
tacactattattggtgtggagcaaacagctaaaagttttgatcttacagaatattgcttc
ccagagaaatcactattattgctgggaaatgaacatgaaggaatcccagccaacctgatt
caccatctggatgtctgtgtggaaattcctcagcagggcattatccggtcactcaacgtt
catgtgagcggagctctgctgatctgggagtacacaagacaacaagtgatcaagcgaaaa
caacaacaataa
DBGET
integrated database retrieval system
