Taeniopygia guttata (zebra finch): 100224541
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Entry
100224541 CDS
T01082
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X8
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100224541 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100224541 (RAPGEF2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100224541
NCBI-ProteinID:
XP_002199010
Ensembl:
ENSTGUG00000005715
LinkDB
All DBs
Position
4:complement(40150169..40333478)
Genome browser
AA seq
1489 aa
AA seq
DB search
MKPLAIPANHGVMGQQEKHSLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLS
DIYQATESEAGDMDLSGLPETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTD
DDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGS
VEVTYPDGRTEILCMGNSFGVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEK
NMQKVEEEGEIVMVKEHRELDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLL
TYRTFLSSPMEVGKKLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENN
LEREKMGGHLRLLNIACAAKAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGS
KATEAGLKRGDQILEVNGQNFENIQLTKAMEILRNNTHLSITVKTNLFVFKELLTRLSEE
KRNGAPHLPKIGDIKKASRYSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKT
RISILPQKPYNDIGIGQSQDDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFN
TTPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPE
GVIKQRRLPDQLSKLADRIQLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVE
VATQLSMRNFELFRNIEPTEYIDDLFKLKSKTGCTNLKRFEEVINQETFWVASEILRETN
QLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDL
QDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMI
AKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVAQAGGHKKRVRRSS
FLNAKKLYEDAQMARKVKQYLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRSGKSE
TSPVAPRAGIQQKVQQQHKVNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSL
SEEGSLDRHKKQSEDTVSSASSQLSSPPTSPQSSPRKGYTLAPSSTVDNFSDSGHSEISS
RSSIVSNSSFDSMPVPLHDERRQRHSVSIVETNLGVGRIDRRIMIEPDQYSLGSYAPLSE
TRGLYAGATVLSSPSTEELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWE
TLPFGHTHFDSSGDGAGLWASGGHMDQLMFPDHGTKYGRQSQGREGLDQAQSRASWASST
GYWGEDSEGDTGTIKRRGGKDVSIEADTSSITSVPAEETKPAPVPPHTAAASSSTKGLVA
RKEGRYREPPPTPPGYVGIPIAEFAEGGSHPARKPPDYNIALQRSRMVARTCETHGTATP
QQQSHGHSTGRPVNKPQWHKPNESDPRLAHYPSQGFSTEEDEDEQVSAV
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacttgcaatcccagctaaccatggagttatgggccagcaggagaaacactca
cttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacccac
gtttcatctagtcactcaggatgtagcatcactagtgattcaggaagcagcagcctttct
gatatctaccaggctacagaaagtgaggctggtgatatggatctcagtggattgccagag
acagcagtggattctgaggatgatgatgacgaagaagacattgagagggcatcagatcct
ttgatgagtagagatattgttagagactgcttggagaaagacccaatagacaggacagat
gatgacattgaacaactactggaattcatgcatcaattgcctgcttttgccaacatgaca
atgtcagtgaggagagaactctgtgctgtaatggtatttgcagttgtggagagagcagga
actattgtactaaacgatggggaagagctggattcctggtcagtcattttgaatggctct
gtggaggtgacataccctgatggaagaacagagatattatgcatggggaacagttttggt
gtttctcccaccatggaaaaggaatatatgaaaggagtgatgagaaccaaagtggatgac
tgccagtttgtttgtatagcccagcaagattattgccgcatcctcaatcaagtggaaaag
aacatgcagaaggtggaagaggaaggggagattgtgatggtgaaggagcacagggagctt
gaccgcactggaacgagaaaaggccacattgtcatcaagggaacagctgaaaggttaaca
atgcatttggtggaagagcactctgtggtagacccaacatttatagaagacttcctgttg
acgtataggacctttctttccagcccaatggaagtgggcaagaagttgttggagtggttc
aatgaccccagcctcagggataaggttacacgggtagtattgttgtgggtgaacaatcac
ttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaacaat
ttggagagggagaaaatgggtggacatttgaggctgttaaatattgcttgtgctgctaaa
gctaaacgaagattgataaccttaacaaagccatctcgagaagcccctttgccttttatc
ttgctgggagggtcagaaaagggatttggaatctttgttgacagtgtagattttggtagc
aaagctacagaagcaggcttgaaacgtggagaccagatactggaagtgaatggtcaaaac
tttgaaaacattcagttgacaaaagccatggaaatccttagaaataacactcatctgtct
atcactgtgaaaaccaatttatttgtttttaaagaactcttaacaaggttgtcagaggaa
aaaagaaatggtgctccccacctgcctaaaattggtgatattaaaaaggcgagtcgttac
tccatccctgaccttgctgttgatgtggagcaggtaataggattagaaaaagtaaataag
aaaagtaaagccaacacagttgggggaagaaataagttaaagaagatacttgacaagact
cgaatcagcattctgcctcagaaaccatacaatgacattggaattggccagtctcaggat
gacagtattgtgggactgaggcaaacaaagcacattcctcctgctttacctgtcagtgga
accctgtcatccagtaatcctgacctgctgcagtctcatcaccgcattttagactttaat
actactccagacttaccagaccaggttctgcgggttttcaaggcagaccagcaaagtcgc
tacataatgatcagcaaggacacaacagcaaaggaagtggtcatccaggccatcagggaa
tttgctctgactgcaacccctgatgcctattcactgtgcgaggtctctgtcacacctgag
ggggtcatcaagcaaaggaggcttcctgatcagctatccaagcttgctgacaggatacag
ctgagtggaaggtattacttgaagaacaacatggaaacagaaactctttgttcagatgaa
gatgctcaagagttattaagggaaagccaaatttccctactacagctcagtactgttgag
gtggctacccaactctccatgaggaactttgagctgttccgtaatatcgaacccacggaa
tacatagatgacttgtttaaactcaaatcaaaaacaggttgcactaatctaaaaaggttt
gaagaggtgataaatcaagagacattctgggtggcttctgagatcctaagagaaaccaac
cagctgaaaagaatgaagatcattaagcatttcattaagatagcgctgcactgcagagaa
tgcaagaacttcaactcgatgtttgccatcattagtggcctgaatttagcaccagttgca
aggctccgaactacttgggaaaagcttccaagcaagtatgaaaaactgtttcaagatcta
caagacttgtttgatccttctaggaatatggcaaaatatcgtaatgtccttaacagccaa
aacctacagccccctattatccccctgtttcctgtcatcaaaaaagaccttacattcctt
catgaaggaaatgattctaaagtggagggcctggtgaattttgaaaagctgcggatgatt
gcgaaggagatacgccatgtcggccgcatggcgtctgtgaacatggatcctgctctcatg
tttagaacaaggaagaagaaatggaggagtttggggtctctcagccagggcagtgccaat
gcagctgtgttggatgttgcacaagcaggagggcataaaaagcgggtccgtcgcagctcc
tttcttaatgctaaaaagctctatgaagatgctcagatggcacggaaagtaaagcagtat
ctctcaaacttggatctggaaatggatgaagagagcctccagacactctctctgcagtgt
gagccagccacgaacacattgccgaagaacacaggagacaagcgatctgggaaatctgaa
acgtcaccagtggctccccgggcaggcatccagcagaaagtgcagcagcagcataaagtg
aaccaagcattgcaggtcccggccgtgtctctgtatccctctcgcaagaaggtgccagtc
aaagacctcccaccattcggcattaactccccacaagctttaaagaaaattctttcattg
tcggaagaaggaagtttggatcgtcacaagaagcaatctgaagacactgtctcaagtgca
tcttcgcagttgtcttctcctcctacttcaccacagagctctccaaggaaaggctacact
ttggctccaagcagcaccgtggataacttctctgattctggtcacagtgaaatttcttct
agatctagtattgtcagtaattcctcttttgactctatgccagtccccctgcatgatgag
aggagacagaggcattctgtcagcattgtggagacaaatcttggtgtgggaaggattgat
agaagaatcatgattgaaccagatcaatacagcttaggctcatatgcaccgctgtcagag
acccgaggcctgtatgctggagcaactgtactttcttctcctagtacagaagagctgtca
caggaccagggggacagagcttcactcgacgcagctgacagtggccgtgggagctggact
tcttgttcgagtggttctcatgataacatccagacaattcagcaccagaggagctgggag
actctgccttttggacacactcattttgatagttcaggcgatggggcaggactatgggcc
tcgggtggccacatggaccagctgatgttccctgaccatggcacaaagtatggcaggcaa
agtcaaggtagggagggccttgatcaagcacagtccagagcaagctgggcatcttccaca
ggatactggggagaggactccgagggtgatacaggtaccataaagcggaggggtgggaag
gatgtttcgattgaagctgacaccagtagcataacatctgtaccagcagaggagacaaag
ccagctcccgtccctccccacacagcagcagcatcaagtagtacaaaggggcttgttgca
agaaaagagggtcgatatcgggaaccacctccaactcctcccggttatgtaggaatacct
attgctgagtttgcagaaggtggctcccatccagccaggaagcctccagattacaacata
gcacttcagaggtctagaatggtggcacggacatgtgagactcatgggacagcaactcca
cagcagcagtcacacggccactcaactggcaggcccgtgaacaaacctcagtggcataaa
ccaaatgagtcagacccacgtcttgctcactatccatctcaagggttttccacagaggaa
gatgaagatgaacaagtctctgctgtctaa
DBGET
integrated database retrieval system
