Taeniopygia guttata (zebra finch): 100225397
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Entry
100225397 CDS
T01082
Symbol
SIM1
Name
(RefSeq) single-minded homolog 1
KO
K09100
single-minded
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100225397 (SIM1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100225397 (SIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
100225397
NCBI-ProteinID:
XP_002196673
Ensembl:
ENSTGUG00000012278
UniProt:
H0ZPV8
LinkDB
All DBs
Position
3:complement(39729756..39780162)
Genome browser
AA seq
766 aa
AA seq
DB search
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
GEAWGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQVTATKPAFSYANSA
PTITDNRKGSKSRLSSTKSKSRTSPYPQYSGFHTERSESDHESQWGGSPLTDTASPQLLE
PADRASSQHHDVSCAYRQYSDRSALCYGFALDHSRLADDRHFHTQACEGGRCEAGRYFLG
TPQPGRESWWGSRSALPLTKSSPESREAYENSMPHITSVHRIHGRGHWDEDSVVSSPDPG
SASESGDRYRTEQYQNSPHEPSKIETLIRATQQMIKEEENRLQLRKTTPDPLVSINGTGK
KHTLCFASYPQQQLAADICRVPTVANTPPCEHIQQRDGKIMSPHENDYDNSPTTLSRISS
PSSDRISKSSLVLAKDYLHSDMSPHQTQGDHPAASPNYYSSHRQYFDKHAYTLTGYALEH
LYDTETIRNYSLGCNGSHFDVTSHLRMQQDPAQGHKGTSVIITNGS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaagtccaaaaatgctgcccggactaggcgggagaaagaaaacagtgaattt
tatgaactggctaaattactacccctgccctccgctatcacctctcagctggacaaagca
tccataatcagactcactaccagctatttaaaaatgagagtggtttttccagaaggactt
ggggaagcctggggccactccagccgaacaagcccactggataatgttggacgggaactg
ggatcccatcttttgcagacgttggacggtttcatatttgttgtggctccggatggcaag
atcatgtacatctcggagactgcctcggtgcacctgggcttgtcgcaggtagaactgact
ggcaacagcatttacgagtacatccaccccgccgaccatgacgagatgacggccgtgctg
acggcgcaccagccttaccactcgcacttcgtgcaggagtacgagatcgagagatccttt
ttcctgaggatgaagtgcgtcttggccaagaggaatgcgggcctcacctgcgggggctac
aaggtcattcactgcagcgggtacctgaagatccgccagtacagcctggacatgtccccc
ttcgacggctgctaccaaaacgttggcttggtcgccgtgggccactcgctgccgcccagc
gccgtgacggagatcaagctccacagcaatatgttcatgtttcgggccagcctagacatg
aagctcatattcttagattccagggtagctgagctaacaggttacgagccccaggacctg
atagagaagaccctttaccaccacgtccatggctgtgacacctttcacctgcgctgcgca
catcacttgttgctggtgaaagggcaagtgaccaccaagtactaccgcttcttggccaag
cacggcggctgggtgtgggtgcagagctacgccaccatcgtgcacaacagccgctcctcc
cgcccgcactgcatcgtcagcgtcaactacgtgctcacggatactgaatataaaggacta
cagctctccctggatcaggtcacagctaccaagccggcattctcatacgcaaactcagct
ccgaccataacggataatagaaagggaagcaaatctcgcctctcgagtaccaagtcaaaa
tcaaggacatcaccgtacccacagtattctggatttcacacagagagatctgagtctgac
catgagagccagtggggtgggagccccctgactgatacagcttctccacagctcctggag
cctgcagacagagcgagctcccagcaccacgatgtctcctgtgcctacagacagtactca
gaccgcagtgcgctctgctacggttttgcactcgaccactccaggctggctgatgacagg
catttccacactcaggcctgtgaaggaggcagatgcgaagctggccgctatttccttggc
acgccgcagccgggaagggagagctggtggggctctcgttcagcgttgcctctgactaag
tcgtcccctgagagcagagaagcgtatgagaacagtatgccccacataacgtcagtgcac
aggattcatggaagaggacactgggatgaggacagtgttgttagctcacctgatcctggc
tctgccagtgagtcaggggaccgataccgtactgagcagtatcagaacagtccgcatgag
cccagcaaaattgaaactctaataagagccacccagcaaatgattaaagaagaagaaaac
aggctacagctgcggaaaaccactcctgacccactggtctccattaatggcacagggaag
aagcacactctctgttttgcaagctaccctcagcagcagttggcagcggacatctgccgt
gttccaacagttgccaacactcctccttgtgaacacatccagcagcgagatggaaagatt
atgagcccgcatgaaaatgactatgacaacagccccacaacactgtctaggataagcagc
cccagttctgatcgaatatccaaatctagtttggtacttgctaaagactacctgcattca
gacatgtcccctcatcaaacccaaggagaccacccagcagcctctccaaattattacagc
tcccacaggcagtactttgataagcatgcttacacactgaccggatatgccctggagcat
ctatatgacactgaaacaattagaaactattcactaggctgtaatggatcccactttgat
gtgacttctcacttaaggatgcagcaagatccagcacaaggacacaagggaacatctgtt
ataataactaatggaagctga
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