Taeniopygia guttata (zebra finch): 100226248
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Entry
100226248 CDS
T01082
Symbol
SLF1
Name
(RefSeq) SMC5-SMC6 complex localization factor protein 1 isoform X1
KO
K26126
SMC5-SMC6 complex localization factor protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100226248 (SLF1)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100226248 (SLF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
RTT107_BRCT_5
BRCT
Motif
Other DBs
NCBI-GeneID:
100226248
NCBI-ProteinID:
XP_012432886
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Position
Z:complement(15972901..16009841)
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AA seq
921 aa
AA seq
DB search
MASCTQKRIIQITGFKNQEKKALLKCLFKLNCVFVESKKYRNCTHLVAKKLCKSEKVLAA
CAAGKWVLTKEYIINSAESGRWLDETTYEWGYEIERDTHYSPQMQSAPKRWREELTNSSA
PGAFHRWKVVLLVKRGDKRMACIRSALLLDGVLKAGKATICSSENVEHDITHVFIGGKIS
PLQNKKHLSEARHYSLKYIGHYLFQNEIQNPEDTQMNDVLAAQEMDQVTSTMKLAEMKNV
IIKHMYFTVTIKHRLMQTDQLNKCNPEVKSTNWSRGTWFILQGLVEEDLLHDVVTELAAG
HMYSAPPVQLLHPLLEHVLLGNTDTFFFAKLCHVFYLVLHCEPPWKSPLMLKYYLDFLQC
PICKKGTWSFIEMLVRSCLYCETVCHAVTVSETEDELRIVHKTLLKFFFDLVKGEVEFLT
KSLVEGTNSQHQQVLPQTVLLKTFLLESETAVLFTKHINILADWVIFSHRELNGKNDAFR
SEVAGLLNAILGTVVDYWIISGLLMDRNVFHQVHDLAHYLTISCDDFSACQLKMFLCAIP
SDWLQLFVAEVIFKQMCLQRNIAVSTEPLSLQKIVCSYSRALRAIGMRETEIHKAKKMKI
GQQPCPESQRTLQMLNGDKQNQVKVLPDLPDLIFNKLTGKTEVQTAHTKGSYLLAEEVHK
RNIKGETALHKACRNNKVERLIQLLSLPGTDINVKDYAGWTPLHEACNHGSTACVREILE
RCPEVDLLSQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLEQRNSHEKLPLDCVESVTA
KEELFNLVYPGESIEIFYECREQDFCDQKKELCLISFTKMLLNFCSIYNLSTPMTVTLRV
IPCSNVLPVMACDSSKMKNAFSGDWLVDTYLKALETFEKLPQFLQEISESMLFFPGEQAK
ALLAALETMVEACQCLNLSSS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttgcacccagaaaaggataatacaaatcactggatttaaaaatcaagagaag
aaggcactactcaaatgcctgttcaagctgaactgtgtttttgtagagagtaagaaatac
agaaattgtacacatcttgtagcaaaaaagctgtgcaagagtgaaaaagtcttagctgcc
tgcgctgctgggaagtgggtactaactaaggagtacataattaatagtgctgaaagtggc
agatggcttgatgaaacaacgtacgaatggggatatgaaattgaaagagacacccattat
tcacctcaaatgcaatctgcacctaaaagatggcgtgaagaactgacaaactctagtgct
ccaggggccttccacagatggaaagttgtcctccttgttaagagaggtgataaacgaatg
gcatgtattagaagtgccttgctgttggatggagttcttaaagctggaaaggcaaccata
tgttcatctgaaaatgtggagcacgatataactcatgtattcatcggtggtaaaatttct
cctttacaaaataaaaagcatctctctgaagctcgacactacagtttgaaatatatagga
cattacctttttcaaaatgaaatacaaaatcccgaagatacacagatgaacgatgtcctg
gctgcacaagaaatggatcaagtcacgtctacaatgaaacttgctgaaatgaaaaatgtt
attataaaacatatgtattttactgtgaccattaagcacaggcttatgcaaacagaccag
ctgaacaaatgcaatccagaggttaaaagtactaactggtccagaggtacttggtttata
cttcaaggattagtggaagaggacttactccatgatgtagtcacagaacttgctgcaggc
catatgtacagtgcacctcctgtgcaacttcttcatcctcttctagaacatgtcctattg
ggaaacaccgatacatttttttttgccaaactttgtcatgttttttaccttgttcttcat
tgtgaacctccctggaaatccccattgatgttgaagtattacttggattttcttcagtgt
cctatctgtaagaaaggcacatggtcctttatagagatgcttgtaaggtcttgcctttat
tgtgaaacagtttgtcatgcggtcacagtttcagagacagaagatgaactgaggatagtt
cataaaacattattgaagtttttctttgatttagttaaaggcgaagtagagtttctgaca
aaaagtttggttgaaggaacaaattcacagcatcaacaagtcttgcctcagacggttctt
ctgaagacattcttgcttgaaagtgaaaccgcagtgctttttaccaaacacataaatatt
ctagcagattgggtcatattttcccatagagaattaaatggaaaaaatgatgctttcaga
agtgaagttgctggtctgttaaatgcaattcttggaactgtagtggactattggatcatc
tcaggtttgctcatggacagaaatgtgtttcatcaagtgcatgatttggcacattacctt
accatttcatgtgacgatttttctgcatgtcaattaaaaatgtttctttgtgccatacca
tccgactggcttcagctgtttgttgcagaagtaattttcaaacaaatgtgtttacagagg
aatattgctgtttctacagaacctctttctcttcagaaaatagtctgttcctattcacgt
gctttgcgagcgatagggatgcgtgagacagagatacacaaagcaaagaaaatgaaaata
gggcaacagccatgccctgagtctcaaaggacattacagatgctaaatggcgataagcag
aaccaagtcaaagtgctgcctgatctacctgacttaatctttaataagcttacaggaaaa
acagaagtccagactgcacacaccaaagggagttatcttttggctgaagaggtacacaag
agaaatattaaaggagagacagccctgcataaagcttgcagaaataacaaagtggagaga
ttgattcagcttctctctttgccaggaacagacattaatgttaaagattatgctggctgg
acgcctttgcatgaagcctgtaaccatggtagcacagcgtgtgtccgtgaaattctggag
cgttgtccggaggtagacctgctcagtcaagtggatggggtgactcctttgcatgatgca
ctgtcaaatggacatgtagaaattggcaagctgctacttcagcatggggggccagtcctt
ctagagcaaaggaactcccatgagaaactgccactggattgtgttgagtcagtcacagca
aaggaagaacttttcaatcttgtttatccaggagagagcattgaaatcttctatgaatgc
agagaacaagatttttgcgatcagaagaaagaactgtgtttgatttcatttactaagatg
ctgcttaatttttgttccatttataatttgtcaacacccatgactgtaactctgagagtg
ataccttgttcaaatgtacttccggtaatggcttgtgatagctctaagatgaaaaatgca
ttttctggagattggttggtagatacatatcttaaagcgctagaaacttttgaaaaacta
ccacagtttcttcaagaaatatctgaaagcatgttattcttccctggtgaacaggcgaag
gcgttattagcagctctggaaactatggtagaagcatgtcagtgcctaaatctttctagc
agttaa
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