Taeniopygia guttata (zebra finch): 100226716
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Entry
100226716 CDS
T01082
Symbol
SORCS1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100226716 (SORCS1)
Membrane trafficking [BR:
tgu04131
]
Protein recycling
Others
Others
100226716 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100226716
NCBI-ProteinID:
XP_030132228
Ensembl:
ENSTGUG00000010498
LinkDB
All DBs
Position
6:complement(24227628..24485810)
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AA seq
1260 aa
AA seq
DB search
MEKVAGWYPAWHIALLYWTWLFLFTYGFTGAEITCRSCRSQVQPQQQPQQGLLMHLRTDR
GEKEQRRFLGEKGGERGQEAGTEEDAGQQATLAPAPGMKFSGWEARRVTREPEKVAGERR
PRAAAAQAAEEPGLRGSRGRPRSVRRRRGRSPRGSAGPGPGPGGAAGREPGDGGAARFGL
EELRLASTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGT
TYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYIH
SLLFHPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVTPNRFYWSMMGNGREPDLVHLE
ARTVDGYAQYITCKMQNCSEATRSKPFPGYIDHNSLIVQGDYVFVQLTSGGRPHYYVSYR
RSPFAQMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENV
KSSQGLEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPHTDLRGNP
IHCLLPYCSLHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGTELSDNDISMFVTSDAG
NTWRQIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSLPLFVDGV
LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAK
RIYRKRKSEKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSK
DCSLGQSYLNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKPPQGLRILTADGRLTAQQGH
NVTFLLQLEEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVTVLVENSL
GSDSAVLYLHVTCPLEHVHLSLPFVTTKNKEINATAVLWPSQVGTLTYVWWFGNNTEPLI
TLEGSITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEKFQSLRLSFSPNLDDYNPDIP
EWRRDISRVVKRALVEATGISSKHVLVAVLPGLPTSAELFILPYQDATGEKKRTAANLEQ
ISEMLIQKLNQNLVHFELKPGVRILVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLA
VFVIYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQSELMSPEQLVDEKLEVR
PIEQPQATVQNPRKGNATKVVWTEDFQKACGSPRDFKPRPRAEVFPQLLSPRVQKKSLPM
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacccagcctggcacattgctctcctgtactggacatgg
ctttttctcttcacttacggctttaccggtgcagaaataacttgcagatcctgccgttcc
caggtgcagccgcagcagcagccgcagcagggattactgatgcacttgaggaccgacaga
ggagaaaaggagcaaaggagattcctcggggagaagggaggtgagagagggcaagaggcc
ggcacggaggaggatgccgggcagcaagcgaccctcgctcctgctccggggatgaaattc
agcggctgggaggcacggcgagtgacgagggagccagagaaagtggccggggagcgccgt
ccccgagcggcggcggcgcaagcggccgaggagcccgggctccggggctcccgcggccgg
ccgcgctcggtgcggcggcgccggggccgcagcccgcggggctcggcggggccgggcccg
ggcccgggcggcgccgcggggcgggagccgggggacggcggcgccgcccgcttcgggctg
gaggagctgcggctggccagcaccaccttcgccctggccggagactcggcgcacaaccag
gccatggtgcactggtccggccacaacagcagcgtgattctaattctgacaaagctctat
gactacaacctgggaagcatcacagagagctctctttggaggtcaacagattatgggaca
acatatgagaaactgaatgataaagttggtctgaagactattttgagctacttgtatgtt
tgcccaacaaacaaacgtaagattatgctgttgactgatccagaagttgaaagcagctta
ttaatcagttccgatgaaggagccacctatcaaaaataccgtctgaacttctacatccac
agtctgctcttccaccccaaacaggaagattggatcttagcctacagccaagatcagaag
ttattcagttctgtggagtttggcagaagatggctgcttcttcatgagggagttacacca
aacaggttctactggtctatgatggggaatggaagagagcctgaccttgtgcacctggag
gcaaggacagtggatggttatgcccaatacatcacctgcaagatgcagaactgcagtgaa
gccactcgcagcaaaccctttccaggctacattgaccataactccctgatcgtccagggt
gattatgtctttgtccagctgacatcaggaggaagaccacattattacgtttcttatagg
aggagcccatttgcacaaatgaagctgccaaagtactccttgcccaaggacatgcatgtg
atcagcacagatgagaatcaggtgtttgcagctgttcaggagtggaaccagaacgacacg
tacaatctgtacatctctgacacccgaggggtctacttcaccctggccttggaaaatgtc
aagagtagtcaagggctggaggggaatgtgatgattgacctctatgaggtagcagggata
aagggaatgttcttggctaacaagaagattgacaaccaagtgaaaactttcatcacctac
aacaaagggagagactggagtttgttgcaggctccacacacggatctgaggggaaatccc
attcactgtctcctaccctattgctcccttcatcttcacttgaaggtctcagacaacccc
tacacctcaggaaacatcgccagccgagacactgcccccagtattattgtagcttcaggt
aatataggcactgagctatcagacaatgacatcagcatgtttgttacttctgatgctggg
aacacttggaggcagatctttgaggaagagcacagtgttctgtacctggatcaaggtgga
gtactcgttgccatgaaacacacatctctgcctatcagacacctctggttaagttttgat
gaagggagatcttggagcaagtacagtttcacatccctcccactgtttgtagatggagtt
ttaggggagcctggagaggaaaccctcatcatgaccgtgtttggacatttcagccaccgc
tcagagtggcagctggtgaaagtagactacaagtccatctttgatcggagatgtgcggaa
gaggactacaggccttggcagcttcatagccagggagaagcctgcatcatgggggcaaaa
aggatctacaggaagcgcaagtcagagaagaaatgcatgcaagggaaatacgctggggcc
atgacctcggagccctgcgtgtgcacagaggcagactttgactgtgattatggatatgaa
cgccacagcaatggccagtgtctaccagcattttggtataacccatcctccttgtcaaaa
gactgcagccttggacagagttacctcaacagcactgggtaccggaaggttgtttccaac
aactgcacggacggggtgcgggagcgctacacggccaaaccccagcagtgcccgggcaaa
cctccccaggggctccgcatcctcacggccgacgggcggctgacggcccagcagggccac
aacgtcaccttcctgctgcagctggaggagggagacctccagagatccctcattcaggtg
gattttggagatggcatcgctgtgtcatatgccaacctcagctcaacagaagatgggatc
aagcacatctaccagaacgtgggcatattccgagtgaccgtgctggtggaaaacagcctg
ggttctgacagcgctgttctctacctgcatgtaacgtgccccttggaacacgtccactta
tctctaccctttgtcaccacgaagaacaaggagatcaacgccacagcagtgctgtggcca
agccaagtgggaacacttacttatgtctggtggtttgggaacaacacagagccactgatc
acattggaaggaagcatcacattcacattttctgtggaagggatgaacaccatcactgtt
caggtctcagcaggaaacaccattcttcaggacacaaagactattgcagtgtatgagaaa
tttcagtccctgaggttatcgttctctccaaacctcgatgactacaacccagatatccca
gagtggagaagggacatcagcagagtagtcaagagagctctggtggaggctacaggtatt
tccagcaagcacgtgctggttgcagtgctccctggcctgcccacatctgctgaactcttc
attttaccatatcaagatgccacaggagaaaaaaaaagaacagcagcaaacctagagcag
atttcagaaatgctgatccagaaactgaatcaaaacctggtccattttgagctgaagcca
ggagttcgaatccttgtccatgctgcccatttaacagcagctcccctggtggacctcact
cccagtcacagtggttcagccatgctgatgctcctctctgttgtttttgtgggactagct
gtgtttgtcatctacaagttcaaaaggaagattcctggccttaatatatatgcacagatg
cagaatgaaaaagatcaagagatggtcagtccagtcagtcagagggaaagcatacctaat
gtccctcaaagtgagctgatgagccctgagcaactagtagatgagaagttggaagtccgc
cccatagagcaacctcaggccacagtccagaacccaaggaaaggaaatgcaaccaaggta
gtctggacagaggacttccaaaaagcttgtggatcaccaagagatttcaagccaagaccc
agagcggaagtatttccacagctgctgagccccagagtacaaaagaaatccctacctatg
taa
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