Taeniopygia guttata (zebra finch): 100226820
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Entry
100226820 CDS
T01082
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100226820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100226820
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100226820
Intermediate filaments
Intermediate filament-binding proteins
100226820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
TnpV
CH_2
Motif
Other DBs
NCBI-GeneID:
100226820
NCBI-ProteinID:
XP_032602134
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MSSSHHLHLPPSPVWAWFWFWFWFWFWWGGVGWQDLLRAGGPRVPQPKPTRGRMRIHSLE
NVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRS
AKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLIDFHKLTKSNATYNL
QQAFNTAEQHLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVL
DQVLEIAAITARYEALAAELLAWIHHTITIITKQKFANSLTGVQQQLQAFTAFCTLEKPV
KFQEKGNLEVLLFTIQSKLRATNRKLYVPSEGKSISDINKAWSCLEKAEHEREVALRNEL
IRQEKLELLAQRFDHKATMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSY
QERIQVVVELALEMESEGYYDTRRIGAQKDNVLRQWALLTELLRARRARLEQNLALQKIF
QEMVYMIDWMEEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADIAAQTERVQALNAAALKF
SELEGYQPCDPQIICNRVHHVQTCLEELEELAAKRRKELEDSRQLWTFFQEMEEAEAWIR
EKEKILAAKTCGRDLSSVVTLTNKHKTMLGELGNRRALLHQTMKKGEKILAKKSFSSVGI
QEKMREVCLRWKKLEEVTGLHQQRLEDAMNFFQFSAEMDDLVAWLQDTYRIVSSEDFGHD
DHSSQALLRKHRAVVEQVEKTRAAVLALRQHLALLAPDHRQGVDIQIRVVEVEQLYGEVA
EVAVLRTQWLQDALAVYRMFSEVHACEVWVDEKEQWLEKMEVPEELDEVEVIQHRFESLD
QEMNSVMGRVLDVNQVVQQLVDGGHPSSDEVRSCQDHLNSRWNRVVELVENKKSQLSSVL
KIQNFLLECSEMKEQVREKRRTIEATQSGGSDLGGVLALQRRLSTMEAALVALEPRLVEL
QQEGETLAAAHPDRALEILLPFEEIGHEWDNLKRALQGCEDTLTVAGRLQQFIQDLDNFL
GWLVKTQAAVGSEEVPESLAEAEKLLNVHVALKEEINGYEEDYAKIQAASELLALEDMEV
PHLSLQQWLQKLDAGWGKLLQSWDMRRELLVQSHVFHLFLRDVQQCQKLLCKQETALANA
ELPDTVEGVTKALKKHKDFTTTLELNLQKVQLVLQAGESLRRQGNLHSERVAEAMEELRA
RSEQSRGRAREWAERLQRQRDLERFRGACREVPTPPLITMESQVEEWSKEVGELQAQAAA
LPAQAAGRDAVGERQSAVGTRIVRLIEPLKERRRXLLASKEVHQVSHELEDEVMWVQDRL
PLAMLKDHGTNLQTVQQFIKKNQNLRREIQVHRPRVDEVLERAAAVASIRSPEAEAVRGL
LERLATMWAELQEKTERRQQALDATYQLEQYYFDVAEVEAWLGEQELLLMNEEKGKDEQS
TLHLLKKHLLTEQTIDNYEETIAQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKEL
VEERKVHLEQQYWLYQLSREVDELEHWIAEKEVVAGSPELGQDFEHVTLLQEKFLEFASE
TGSVGQERIAAVNQMVDELIDYGHRDAATIAEWKDGVNEAWADLLELMETRAQMLAASHE
LHKFFNDCKEVLGQIEEKRRRLPELAARDGRSSAGALQRALGAFQHDVELLVAQVRQLQE
GAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVASVAEKIRFVGAVRDLLA
WMDGVIQQMGAAEKPRDVSSVELLMNDHQSLKTEMEARAKNVATCLELGKTLILSKSPAA
DEIKSHMEKLLAKKKEMTEKWDKHWEWLQQMREVHQFAQEAVVADAWLTAQEPLLKSQEL
GSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLKAEQNQQPPTPLLTRKFPGD
PAGGAGGADAPRPEPRVAYVRHELRPERLQPKLDRVQPPATAGGAEEPAPATAAEPVVAT
KAEEPNEVRPGPPERRRERRERRLERQESSEPEPPRHDGKSGGKATLADIVEQLQEKEAG
GPVPASPRDRDSPARLPAGPESLPERTPRPERPRARDRPKPRRRPRPRDSAQGPGEPRRS
RSAPAQGSAPPPPPPPTHTVTHEGFLLRKHELDGAGKKASNRSWVNLYCVLAKGDLGFYK
DAKGPAAGATHGGEPLLSLHRATAEVANDYKKKKNVFKLKTGDGSEFLLQAKDEEDMQGW
LRALAASAQEHAELARWHQGLLTTSSTDEGLPRRDPDRPRRK
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcccaccatctccatctcccaccatccccagtctgggcctggttctggttc
tggttctggttctggttctggtggggtggggtggggtggcaggaccttctccgagccgga
ggtccccgtgtcccccagcccaagccgacgcggggccggatgcggatccactccctggag
aacgtggacaaggccctgcagttcctcaaggagcagcgcgtccacctggagaacgtcggc
tcccacgacatcgtggacggcaaccaccgcctgaccctcggcctcatctggaccatcatc
ctgcgcttccagatccaggtgatcaagatcaagaccgaggacaaccgggagacgcgctcg
gccaaggacgcgctgctgctctggtgccagatgaagacggcgggctaccctgaggtcaac
atccagaacttcaccaccagctggagggacggcctggccttcaacgccctcatccaccgg
caccggccggatctcatcgacttccacaagttgaccaagtccaacgccacctacaacctc
cagcaggccttcaacacggccgagcagcacctggggctgagcaagctgctggaccccgaa
gacgtcaacatggaggaccccgacgagaagtccatcatcacctacgtggtgtccttctac
cactacttctccaagatgaaggcgctggcggtggaggggaagcgcatcgggaaggtgctg
gaccaggtgctggagatcgcggccatcacggcgcgctacgaggcgctggcggccgagctg
ctggcctggatccaccacaccatcaccatcatcaccaagcagaagttcgccaactcgctg
accggcgtccagcagcagctccaggccttcaccgccttctgcaccctggagaaaccggtc
aagttccaggagaaggggaacctcgaggtgctgctcttcaccatccagagcaaactccgg
gccaccaaccgcaagctctacgtgcccagcgagggcaagagcatctccgacatcaacaag
gcctggagctgcctggagaaggcggagcacgagcgggaggtggccctgaggaacgagctg
atccggcaggagaagctggagctgctggcccagcgcttcgaccacaaggccaccatgagg
gagacgtggctcaacgagaaccagcgcctggtctcgcaggacaacttcggctacgacctg
ccggcggtggaggcggccatgaagaagcacgaggccatcgaggccgacatctcctcgtac
caggagcgcatccaggtggtggtggagctggccctggagatggagtccgagggctactac
gacacgcggcgcatcggcgcccagaaggacaacgtcctgcggcagtgggcgctgctgacc
gagctgctccgcgcccgccgcgcccgcctcgagcagaacctggcgctgcagaagatcttc
caggagatggtctacatgatcgactggatggaggagatgcaggttcttctggtctccaag
gatttggggaagcatctgctggaggttgaggacctcctgcagaagcacgggctgctggag
gccgacatcgcggcccagaccgagcgtgtccaggccctcaacgccgccgcgctcaagttc
tccgagctggagggctaccaaccctgcgacccgcagatcatctgcaaccgcgtccaccac
gtccagacgtgcctggaggagctggaggagctggcggccaagaggaggaaggagctggag
gactcccgccagctctggaccttcttccaggagatggaggaggccgaggcctggatccgc
gagaaggagaagatcctggcggccaagacctgtggccgcgacctcagcagcgtggtgacc
ttgaccaacaaacacaagaccatgctgggcgagctgggcaaccgccgggcgctgctgcac
cagaccatgaagaaaggcgagaagatcctggccaagaagtccttcagctccgtgggcatc
caggagaagatgcgagaagtctgcttgcggtggaagaagctggaggaggtgacggggctc
caccagcaacgcttggaggacgccatgaacttcttccagttcagcgccgagatggacgac
ctggtggcctggctgcaggacacgtaccgcatcgtgtccagcgaggacttcggccacgac
gaccactccagccaggccctcctgcgcaagcaccgcgccgtggtggagcaggtggagaag
acccgcgccgccgtcctggccctgcgccagcacctggctctcctggcccccgaccaccgg
cagggcgtggacatccagatccgcgtggtggaggtggagcagctctacggagaggtggcc
gaggtggccgtgctgaggacgcagtggctgcaggacgctctggccgtctaccgcatgttc
agcgaggtccacgcctgcgaggtgtgggtggacgagaaggagcagtggttggagaagatg
gaggtgcccgaggagctggatgaggtggaggtgatccagcacaggttcgagagtctggac
caggagatgaacagcgtcatggggcgcgtcctggacgtcaaccaggtggtgcagcagctg
gtggatggtggccaccccagctcggacgaggtccggtcctgccaggaccacctcaacagc
cgctggaaccgggtggtggagctggtggagaacaagaagagccagctgagctccgtgctg
aagatccagaacttcctcctggagtgcagcgagatgaaggagcaggtgcgggagaagaga
agaaccatcgaggccacccagtctggtggcagcgacctgggcggggtcctggccctgcag
cgccgcctgtccaccatggaggccgccctggtggccctggaaccacggctggtggagctc
cagcaggagggcgagaccttggccgccgcccaccccgaccgcgccctggagatcctgctg
cccttcgaggagatcggccacgagtgggacaacctcaaacgggccctccaaggctgcgag
gacaccttgaccgtggccgggcgtctccagcagttcatccaggacctggacaacttcttg
ggctggttggtgaagacccaagcggccgtgggctccgaggaggtccccgagagcttggcc
gaggccgagaagctgctgaacgtccacgtggccctcaaggaggagatcaacggctacgag
gaggactacgccaagatccaggcggccagcgagctgctggccctggaggacatggaggtg
ccccacctgtccctccagcagtggctgcagaagttggacgcgggctgggggaagctcctc
cagagctgggacatgaggagggagctcctggtgcagtcccacgtcttccacctcttcctg
agggacgtgcagcagtgccagaagctcctctgcaagcaggagaccgccctggccaacgcc
gagctgccggacacggtggaaggggtgaccaaggcgctgaagaagcacaaggacttcacc
accacgctggagctgaacctgcagaaggtccagctggtcctgcaggccggcgagagcctc
cggcgccagggcaacctccacagcgagcgcgtggccgaggccatggaggagctccgcgcc
aggagcgagcagagccggggccgggcccgggaatgggcggagcggctgcagcggcagcgc
gacctggagagattccggggggcgtgcagagaggtaccgacccctcccctaattacgatg
gagtcgcaggtggaggagtggtccaaggaggtgggcgagctgcaggcgcaggcggcggcg
ctgccggcacaggcggccgggcgggacgcggtgggcgagcggcagagcgcggtggggacg
cgcatcgtgcgcctcatcgagcccctcaaggagcgcaggagantcctgctggcctccaag
gaggtccaccaggtcagccacgagctggaggacgaggtgatgtgggtccaggaccgcctg
cccttggccatgctgaaggaccacggcaccaacctccagaccgtccaacaattcatcaag
aagaaccagaacctgcgccgggagatccaggtgcaccggccccgcgtggacgaggtgctg
gaacgcgccgccgccgtcgcctccatcaggagccccgaggccgaggccgtgcggggcctc
ctggagcggctggccaccatgtgggcggagctgcaggagaagaccgagcgccggcagcag
gccctggatgccacctaccagctggagcagtactacttcgacgtggccgaggtggaggcg
tggctgggagagcaggagctgctcctgatgaacgaggagaagggcaaggacgagcagagc
accctccacctcctcaagaagcacctcctcaccgagcaaaccatcgacaactacgaggag
accatcgcgcagctctcccgccagtgccgcgccctcctggagctcggccacccccagagc
gaacaggtcagcaggcggcagtcgcaggttgaccggctctacgtgtctctgaaggagctg
gtggaggagcgcaaggtccacctggagcagcagtactggctctaccagctcagccgcgag
gtggacgagctggagcactggatcgccgagaaggaggtggtggccggctcgcccgagctc
ggccaggacttcgagcacgtcacgctgctgcaggagaagttcctggagttcgccagcgag
acgggcagcgtgggccaggagcgcatcgccgccgtcaaccagatggtggacgagctgatc
gactacggccaccgcgacgccgccaccatcgccgagtggaaggacggcgtcaacgaggcc
tgggccgacctcctggagctgatggagacccgcgcccagatgttggcggcgtcccacgag
ctgcacaagttcttcaacgactgcaaggaggtgctggggcagatcgaggagaagcggcgg
cggctgccggagctggcggcgcgcgacggccggagctccgccggggcgctgcagagggcc
ctgggcgccttccagcacgacgtggagctgctggtggcccaggtgcggcagctgcaggag
ggcgcggcgcagctgcggacgctctacgccggggacaacgccgaggccatcgccggccgc
gagcaggaggttctccgcgcgtggaaggagctcctggcggcgtgcgaggagtgccggctg
cacgtggccagcgtggccgagaagatccgattcgtgggcgccgtcagggatctgctggcc
tggatggacggggtgatccagcagatgggcgccgcggagaagcccagggacgtgtcctcg
gtggagctgctgatgaatgaccaccaaagcctcaagaccgagatggaggcccgggccaag
aacgtggccacctgcctggagctgggcaagaccctcatcctcagcaagagcccggcggcc
gacgagatcaaatcccacatggagaagctcctggcgaagaagaaggagatgacggagaag
tgggacaagcactgggagtggctgcagcagatgcgcgaggtgcaccagttcgcgcaggag
gccgtggtggccgacgcgtggctgacggcccaggagccgctgctgaagagccaggagctg
ggcagcagcgtggacgaggtggagcagctgatccggcggcacgaggccttccggaaggcg
gcggccgcctgggaggagaggttcagctccctgcggcgcctcaccacgatcgagaagctc
aaggccgagcagaaccagcagccgccgacgccgctcctgacccggaaatttccgggggat
ccggcgggaggagcgggaggagcggacgctccccggccggagccgcgcgtcgcctacgtc
cggcacgagctgcggccggagcgcctccagcccaagctggaccgtgtccaaccaccggcc
accgccggaggagccgaggagccggccccggccaccgccgccgagcccgtggtggccacc
aaggctgaagaacccaacgaggtccggccgggaccaccggagcggcgccgggagcgccgg
gagcgccggctggagcggcaggagtccagcgagccggagccgccgcggcacgacgggaag
agcggcggcaaagccaccctggccgacatcgtggagcagctgcaggagaaggaggcgggt
ggccccgtgccagcttcgccccgtgaccgcgactctcccgcccgtctccccgcgggcccc
gagtccctcccggagaggaccccccggccggagcgtccccgggcgcgggaccggccgaag
ccgcggcggcggccgcgcccccgggactcggcgcagggcccgggggaaccgcggcgctcg
cggtcggcgccggcgcagggcagcgcgccaccgccgccaccaccgcccacccacacggtg
acacacgaggggttcctgctgcgcaagcacgagctggacggcgccggcaagaaggcgtcc
aacaggtcgtgggtgaacctctactgcgtcctggccaagggcgacctgggcttctacaag
gacgccaaaggtcccgcggccggggccacccacggcggggagcccctgctgagcctccac
cgcgccaccgccgaggtggccaacgactacaagaagaagaagaacgtcttcaagctcaag
accggcgacgggagcgagttcctgctgcaggccaaggacgaggaggacatgcagggctgg
ctgcgggcgctggccgccagcgctcaggaacacgccgagctggcccggtggcaccaaggc
ctcctcaccacctcctccaccgacgaggggctcccccggcgcgaccccgaccggccccgg
cggaagtga
DBGET
integrated database retrieval system
