Taeniopygia guttata (zebra finch): 100226942
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Entry
100226942 CDS
T01082
Symbol
BPTF
Name
(RefSeq) nucleosome-remodeling factor subunit BPTF isoform X1
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100226942 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100226942 (BPTF)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
100226942 (BPTF)
NuRF complex (fruit fly)
100226942 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
Bromodomain
DDT
WSD
WHIM1
PHD_5
Motif
Other DBs
NCBI-GeneID:
100226942
NCBI-ProteinID:
XP_030143288
LinkDB
All DBs
Position
18:3737556..3791207
Genome browser
AA seq
3207 aa
AA seq
DB search
MRGRRGRPPKQQQPAAAAAPASAPAPAGPIGGLRSRQRGSSRGRWAAAAQAETAGPKQKG
AGAAQASPPAAAASPRGGGKRKAGGGGGSTPGGGGSGGKGRGRAGAAGAGGGGGAGGSCN
SQGRAASSRRSISKVVYDDHESEEEEEESMVSEEEEEEGDPEDNQDSEEEEEEEIMEEED
DDDSDYPEEMEDEDDASYCTESSFRSHSTYSSTPGRRRQRAHRPRSPILEEKDIPPLEFP
KSSEDLMVPSEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHIVL
LKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQETE
DYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSA
VYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRHRRKY
WFLNRRIIIEEDSESEKDKKIWYYSTKIQLAELIECLDKDYWEADLCKTLDEMREEIHRH
MDVTEDLTNKARGSNKSFLSAANDEILDIIRARKGEIVEDKNTGDEEAEKTKSDVDNDQT
DAERDKEESGDQDKIEETHSEQDVEKERTEEATALGDKSNSVTSSTDDSTTNPSAGENSC
SEGKDAVGCQSETLDSNNVAEKKVASELPLELSEETGQMIPSSGSAAPPQADVENSSGSE
LGSGQNDSIKTLDDAESAERGSQTSEDIGEKSNGERSDSPGAGKGAPGSTRMLTRLRNPD
SKLSQMKSQQVAAASNETNKLYKETREVLVVNSQGEVSRVSTKKDVVIKGNMNNYFKLGQ
EGKYRVYHNQYATNSFALNKHQHREDHDKRRHLSHKFCLTPAGEFKWNGSVHGSKVLTIS
TLRLTIIQLENNIPASFLHPNWASHRSNWIKAVQMCSKPREFALALAILECAIKPVVMLP
IWRESLGHTRLRRMTAIEREEKEKVKKKERKQEEEETMQQATWVKYTFPVKHQVWKQKGE
EYRVTGYGGWSWISKTHVHRFMPKLPGNTNANYRKLLSTKSEDEKCSLDKRKGTTKVKPE
KDRAKDSRDLQAKDKADVSETLEKVQVKEEKLREEKLEVDTISENLEYAKDTVEKDIDGE
NDKVIKEEPMDVDDVKIESSIKDEESHCKRDIINVSEGFHLRTCYKRKVKSSKLDGLLER
RIKQFTLEEKQRLEKIKLEAGAKTGGIRSVSPQKNTDELQTRNGKGGSQFDSSSQDKSYT
LDKTQAEDAEQDCLPISSISCTKTGDEDEPSLPLSNRLSKEGQLLDEDSPQCSEGDSSVQ
NDGRENNPEPSTADECQGQEALGQSESSLVDGLKQTSAEGRIKWDVSETNEKPLKQKLPI
TRVSQRELENLGPVVPESSCRREAVGTLEKADSEGNSEQQSKDPENNCMIKSHMETTSSQ
ESEMEEEIAPVKTESKSEKLILQQKSANKDLESFKTGLISERNLESQTLEHMDGEDDNED
LLSSKLTEANGQNKGQELKVDTDAMNKYLDQTNVNTITDKKNNKDEETETEEEKSSFQMN
GKDNDIKALSNDACLVKNTCEAKAGGDIEPKVNNINKSIPEHEIKPLTFKESSVKPFMNG
DIVGEDTKDKKNVDSKSHLQSSPESGETLQPTDEVPKCVQQPEENQLSPERSASVGCASL
PAQPVCKENNLSSETESMETEAIEEKKVAPSPVTSCEESSLSSHFADQNGVQTYKMENIN
GESKMKTVITEVTTTTSTVSTESKTVFKVAETGAASDEKTTVVSSTENCAISTVTTTTTV
TKLTTPASESNSDVISVQEHSKTVVTTTVTDSLTTPEGTLVTSMTVSKEYSTKDKVKLMK
FTRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARRGGIREVPYFNYNAKPALD
IWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWACLKWDDMAAKAPPGGGTTRTETT
ETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPEAPKETPTPQRKGLRSSALRPKRP
ETPKQTGPVIMETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKVSEQKKAEEFKAQLE
AQLKHQRLAAQQKRLEQQKQIPAGGVVPAATTASSTATTVSTPQKVVVGPLTGPVPTGTK
VVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSSTATSTAATSATTIASTGQTFQLSGS
PVTMAGKVITKLPLPANSKIVAVNVPSTQGGVVQVQQKVLGIIPSTTGASQTFTSFQPRT
ATVTIRPNTTGTLGTTSTSQVVQGTPLRPGMTVIRTPLQQSTLGKTIIRTPVVVQQGILP
ASQTQQVVTQIIRGQPVSTAVSSTSTASSSTGQKTITSSGTAPQQAQPQTPAPPPRPQQG
QVKLTMAQLTQLTQGQGGSQGLTVVIQGQGQTTGQLQLIPQGVTVIPGPGQQLMQAAMPN
GTIQRFLFTPLPAAATTASTTTTTVSTSTSAAGEAKPALQAPPAPAVPTGQGQPPGQPSS
GAQPAGAQPQGAQPEAPNQPEAPGDPAAPPEAQPSKSPAQSPAQAPGLSPAPGPTQPPPA
GLPPGQAQAQHPAQVQTPIQQPSLMWPPTPIQIPARLQQSQPQVQTSGPTLASTQSLNQV
PVQCPAHAQLQLQQPPTSVTAVPQLQQQVEVLSQLQPRAVARIRAQQGSVPQIQLQLPLE
VQQSSPAQAQQVASVVAVQAASVQEQLHRFQQFREQKQKKKQQQIEIKREHTLQASNQSD
ITQKQVVMKQNAVIEHLKQKKMLTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRK
REESVEQKRSKQNATKLSALLFKHKEQLKAEILKKRALLDKDLQIEVQEELKRDLTKIKK
EKERAQAAAAAAAAAAAAAAAAAPPPPPPVPPAPPQLPAASVTSSSSTTVPVPVSSQKRK
REEEKDSSASKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDLCTNWYHGECV
GITEKEAKKMDVYICNECKRAQEGSSEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGI
LQSEADLIDEYVCPQCQSTEDAMTVLSPLTDKDYEGLRRVLRSLQAHKMAWPFLEPVDPN
DAPDYYGVIKEPMDLATMEERILKRYYKKVTEFVADMTKIFDNCRYYNPSDSPFYQCAEV
LESFFVQKLKGFKASRSHNNKLQSTAS
NT seq
9624 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccggcgcggcaggccgcccaagcagcagcagccggcggcggccgccgctccg
gcgagcgccccggccccggcaggccccatcggcgggctgcgctcccggcagcgcggcagc
agccgcggcaggtgggcggccgcggcccaggcggagacggcggggcccaagcagaaggga
gccggcgctgcccaggcctcgccgcccgccgccgccgcctcgcccagggggggcggcaag
aggaaggcgggcggcggcggcggcagcacccccggtgggggaggcagcggcggtaagggc
aggggcagggccggggcggcaggagcagggggaggaggaggcgcaggaggcagctgcaac
agccaaggcagggctgcctcgtccaggaggagcatcagcaaagtggtgtacgacgatcat
gagagcgaggaggaggaggaggagagcatggtgtccgaggaggaggaggaggagggagac
cccgaggataaccaggactccgaggaggaagaggaggaggagataatggaggaggaggac
gacgacgactctgactaccccgaagagatggaggatgaagacgatgccagttattgcact
gagagcagcttcaggagccacagcacctacagcagcaccccaggtaggagaagacagaga
gctcatcgtcctcgttctccaatattggaagaaaaagatatcccacccttggagtttcct
aaatcctcagaggacttaatggtgcctagtgagcacataatgaatgttattgccatctat
gaggtactaaggaactttggcactgttttgcgcctctctccttttcgttttgaggacttc
tgtgctgctctggtaagtcaagagcagtgcacacttatggcagagatgcatatagtgctg
ttaaaagcagttttacgtgaagaagacacttcaaatactacctttggacctgctgacctc
aaagatagcgttaattccactttgtatttcatagatggaatgacgtggccagaggttctg
cgggtatattgtgagagtgacaaggaataccatcatgttcttccttaccaagagacagag
gactatccttatggaccagtagagaataaaatcaaagttctgcagttcttagtggatcag
tttcttaccacaaacattgcacgtgaggagttaatgtcagaaggtgttattcaatatgat
gatcattgtagggtttgtcacaaacttggggatttgctttgctgtgagacttgctcggcc
gtgtaccacttggagtgtgtgaaaccccccctggaggaggtgcccgaagacgagtggcag
tgcgaggtctgcgtggcacataaggtgcctggagtgactgactgtgtggctgaaatccaa
aaaaacaaaccctacatccgacacgaacctattggatacgacaggcacaggcggaaatac
tggttcctgaacaggagaatcatcatagaggaagattcagaaagtgagaaggataagaag
atctggtactacagcacaaagatccagctggcagagttaattgaatgcctggacaaggat
tactgggaagctgacctatgcaaaaccctggacgagatgcgtgaagaaattcatcggcac
atggatgtgacagaagaccttacaaacaaagcaaggggcagcaacaagtctttcctttct
gcagcaaatgacgaaatcttggacattatcagagcaagaaaaggagaaatagtggaagat
aaaaatacaggagatgaggaagcagaaaagaccaaaagtgatgttgataatgaccagaca
gatgctgagagagacaaggaagaatctggagaccaggataaaattgaggaaacacacagt
gagcaagatgtggaaaaagagagaacagaagaggcaacagcccttggggataaaagtaac
tctgtgacctccagcactgatgacagcaccacaaatccttctgcaggagagaatagttgc
tctgaagggaaggacgcagtggggtgtcagtcagaaacccttgatagcaacaacgtggca
gagaagaaggtggcatcagagctccctctggaactctcagaggaaactggtcagatgatc
cccagcagtggttctgctgcacctccacaggcagatgttgagaacagcagtggcagcgag
ctgggctctggccagaatgactccattaagactcttgatgatgctgaaagtgcagagagg
ggatcccagacttcagaggatataggagagaaatccaatggtgagagaagtgattctcca
ggtgcagggaagggcgcgccgggctcgacacggatgctcaccagattgagaaacccagat
agcaaactgagccagatgaaaagccagcaggttgctgctgcatcaaatgaaacaaataag
ttatataaagaaaccagagaggttctggtggtcaactctcaaggtgaagtctcccgagtg
agcaccaagaaggacgttgtgattaaaggaaatatgaacaactatttcaaactggggcag
gaggggaagtaccgtgtttatcacaatcaatatgccaccaattcctttgctttgaacaag
caccagcacagggaggaccatgacaagaggcgacacctctcacacaaattctgcctgact
ccagctggagagttcaagtggaacgggtctgtgcatggctccaaagttctcaccatatcc
accctgaggctgaccattattcagctagaaaacaatatcccagcatccttccttcaccct
aattgggcttcccacaggtctaactggattaaggctgttcagatgtgcagcaaacccaga
gaatttgcactagcactggctatattggagtgtgcaatcaaaccagttgtcatgctgccc
atctggcgggaatccttggggcacacgagattacgcagaatgacagcaatagaaagagaa
gaaaaggagaaagtgaaaaaaaaagagagaaaacaagaagaagaagaaacaatgcaacaa
gctacgtgggtgaaatacacatttcctgtcaaacaccaggtttggaagcaaaaaggagag
gaatatagggtaacaggatatggtggctggagttggattagtaaaacccatgtccacagg
tttatgcccaaactgccaggaaatactaatgcaaattacagaaaattgctgtcaacaaag
agcgaagatgagaaatgcagcttggataaacgaaaaggtacaactaaggtaaaaccagag
aaagacagagcaaaggattctcgagatctgcaagcaaaagacaaagcagatgtttcagaa
accttggagaaagtccaagtaaaagaagaaaagttgcgtgaagaaaaattagaagttgac
acaatttctgaaaacttagagtatgcaaaagacacagtggaaaaagacatcgatggtgaa
aatgataaagtcatcaaagaagaacctatggatgtagatgatgtgaaaattgaatcctcc
ataaaagatgaggaaagtcattgtaagcgggatataatcaatgtcagtgagggatttcat
ttaaggacttgctacaaaaggaaagtaaaatcatcaaaattagatggactcctggagcgg
cgaataaaacagtttacactggaagaaaaacagcgtctagaaaagattaagctggaggct
ggtgctaaaactgggggcattcgatctgtgagcccccagaaaaacacagatgagctacaa
accaggaatgggaaaggaggaagccagtttgactcttcttcccaagataaaagctacact
ttagacaagacccaagctgaagatgcagaacaggactgtttgcccatcagcagcatctcc
tgtaccaaaactggggatgaagatgaaccttctttgcctttgtcaaacaggctctcaaaa
gaggggcagctgctggatgaagactcccctcaatgctctgaaggagacagctctgttcag
aatgatggcagagaaaacaaccctgagccttcaactgctgatgagtgtcaaggacaagag
gctcttggacagtcagagagctctttagtggatggcttgaaacaaaccagtgctgaaggc
agaatcaaatgggatgtttcagaaacaaatgaaaaacccttgaagcaaaagctacctatt
accagagtgtctcagcgagaacttgaaaacttaggaccagtggtacctgaaagcagctgt
agaagagaagctgtgggcactcttgaaaaagcagactcagaagggaattctgaacagcaa
agcaaagatccagaaaacaattgtatgattaaaagccatatggaaacaacatcctctcaa
gaaagtgaaatggaggaagaaattgctcctgtgaagacagaaagtaagtctgaaaagttg
atacttcagcaaaaatcagcaaataaagatctagaatcatttaaaacagggctgatttct
gaaagaaaccttgaaagccaaactctggaacacatggatggagaagatgataacgaggat
ttactgagctctaaactaacagaggctaatggtcaaaataaaggtcaggaactgaaagtg
gacacagatgccatgaacaaatatcttgatcagacaaatgtaaatactattactgacaaa
aagaataataaagatgaagaaactgagacagaagaagaaaaatcatcatttcagatgaat
ggaaaagacaatgacattaaagcattatcaaatgatgcctgcttagtgaaaaatacctgt
gaagctaaggcagggggtgatattgaaccaaaagttaataatattaataaatccattcca
gaacatgaaataaaaccattaacttttaaggaatcttcagtaaaaccattcatgaatggt
gacatcgtgggagaggacacaaaggataaaaagaacgtggactcaaagtcacatctgcag
agttcacctgagtctggagagactcttcagccaacagatgaagttcccaagtgtgtgcag
caacctgaagaaaatcagctttctcctgagagatctgccagtgttggctgtgcttccctg
ccagcacagcctgtctgtaaagaaaataacctgagcagtgaaacagaatctatggaaact
gaagcaattgaggagaagaaagttgctccatcacctgtaacctcatgtgaggaatccagc
ttgagcagtcactttgctgaccagaacggggtacagacatataaaatggaaaatattaat
ggagaaagtaaaatgaaaactgttattactgaagtgactaccacaacctcaactgtgtcc
acagagtccaaaacggtgtttaaggttgcagagactggagctgccagtgatgagaaaacc
acagttgtttcctctacagaaaactgtgccatctccactgtcaccaccaccaccactgtc
accaagctcaccactccagcctcagaaagtaactctgatgtcatctctgtccaggagcac
agtaaaacagtggttactacaacagtcactgattcactgaccaccccagaaggcacattg
gtgacttccatgactgtcagcaaagaatattccacaaaagacaaagtgaagttaatgaaa
ttcacaagacccaaaaaaactcgttctggaactgccttgccatcttacaggaaatttgtt
actaaaagcagtaaaaaaagtatatttgttctacccaatgatgacttaaaaaagctggcc
aggagaggagggatcagagaggttccttatttcaattacaatgcaaagcctgccttggat
atctggccatatccatccccaagaccaacttttgggatcacttggaggtaccgactccaa
acagtcaaatcattggctggagtgagcctgatgttgaggttattgtgggcatgtctcaag
tgggatgatatggcagcaaaagctccacctgggggaggaaccacaaggacagaaacaact
gaaactgaaattacaacaacagaaataatcaagcggagagatgttggtccatatgggatc
cggtcagagtactgtataagaaaaatcatttgtcccattggtgtaccagaggctccaaaa
gaaactccaacaccccagaggaagggactgcgatcaagtgccctcaggccaaaaaggcca
gaaacacccaagcaaacaggccctgttataatggaaacttgggtagcagaggaggagttg
gaactgtgggagatcagggcatttgctgaaagggtggagaaggaaaaggcacaggcagtt
gaacaacaggctaaggttagtgaacagaagaaggcagaggagttcaaggcccaattggag
gctcagctaaaacaccaacgtttggctgcccagcagaaacggctggaacagcagaagcag
atccctgcaggaggtgtggtccctgcagccaccacagccagcagcactgcaaccacagtc
tccacaccccagaaagtcgtggtgggccccctgacaggcccagtccccacgggaaccaaa
gtggtgctcaccactaaagtggggtctccagctacagtaacattccaacagaacaagaat
ttccatcagacttttgctacttgggttaagcaaggccagtcttcaacagccactagcaca
gctgccacctcagccacaaccattgccagcacagggcagaccttccagctctcaggcagc
ccagtaacgatggcagggaaagtgataactaagctgccactccctgcaaacagcaagatt
gttgccgtcaatgtgccatcaactcaaggaggtgtggttcaagttcagcaaaaggtattg
ggtatcattccatcaactacaggtgcaagtcaaacctttacttcattccagccaaggaca
gcaactgtaaccattaggccaaacaccacagggacattaggaacaacaagcacttcacaa
gtagtgcaggggacaccgctgcgccccgggatgacggtgatccggacaccgctgcagcag
tccacccttggcaagaccatcattcgaacacctgtagtggtgcaacaaggtattctgcca
gccagtcagacccagcaagtggtgactcagataatcaggggtcaacctgtctcaacagca
gtttctagcaccagcacagcttcttccagcactgggcagaaaaccatcacaagttctgga
acagcccctcaacaagctcagccacagaccccagcaccgccccctcgcccgcagcagggc
caggtgaagctgacaatggcccagctcacccagctcacacaagggcagggtggcagtcaa
ggcttaactgtggtaattcagggacaaggtcaaactactggtcagttacaattaatccct
cagggtgtgactgtaatacctggtccaggacagcagcttatgcaagcagctatgccaaat
ggtacaattcagagatttctgttcaccccactaccagcagctgctactacagctagcaca
actacaaccaccgtttctacttccacctcagctgcgggggaagcgaagccggctctgcag
gcgcctccggctccggccgtgcccacggggcaggggcagcccccgggccagcccagctcg
ggggcacagcccgcgggggctcagccccagggcgctcagcccgaggccccgaaccagccc
gaggctcccggggaccccgcggcccctcccgaagctcagccctccaaatctccggctcag
tctccagcccaggctccggggctctcgccagcgccaggcccgacgcagccgccgcccgcg
ggcctgcccccaggccaggcccaggctcagcatccagctcaggtgcaaactccaatccaa
cagcccagtctgatgtggccccccactcccatacagattccagctcgcctgcagcaatca
cagcctcaggttcagacctccggcccaacccttgcaagtactcaaagtttaaatcaggtt
cctgtgcagtgcccagctcatgctcagctgcaacttcagcagcctccaacaagtgttact
gcagtgcctcagctccagcagcaagtggaagtcctctctcagctgcagccccgtgctgtg
gctcggatacgagcccagcagggcagtgtgccccagatccagcttcagttgcctcttgag
gtccagcagagtagcccagcacaggctcagcaggttgccagtgtggtggcagtgcaagca
gctagtgtgcaggagcagctgcacagattccagcaattcagggagcagaagcagaagaaa
aagcagcagcagatagaaattaaacgtgagcacacccttcaggcttctaatcaaagtgac
attacccagaaacaggtggttatgaagcagaatgctgtcatagaacatttgaaacagaag
aagatgctgactccagctgagagggaagaaaatcagagaatgattgtgtgcaaccaagtg
atgaaatatattctggataagatagataaagaagaaaaacaggcagctaagaaacggaag
cgagaagagagtgtggagcagaagcggagcaaacagaacgcgaccaagctctcagctctg
cttttcaagcataaagagcagctgaaagctgaaatactgaaaaaaagagcacttctggac
aaagatctacagattgaagtgcaggaggagctaaagagagacttgactaaaattaagaaa
gaaaaagaaagagcccaggcagcagctgctgcagcagcagccgcagccgctgcggccgcc
gccgctgccccaccaccaccgccaccagtgccaccagcaccgccgcagctgccagcagcc
agcgtcacctcctcctcctccaccactgtccccgtgccagtctcctcccagaagaggaaa
cgagaggaggagaaagattcctcagcttccaagtccaagaaaaagaaaatgatttctact
acctcaaaggaaacgaagaaggacacaaagctttactgcatctgtaaaacgccttacgac
gagtccaagttctatattggctgtgatctttgtactaactggtatcatggagaatgtgtt
ggcatcacagaaaaggaggctaagaaaatggatgtgtacatctgtaatgagtgtaaacgg
gcacaagagggcagcagtgaggagttgtactgtatctgcagaacaccttatgatgagtcg
caattttacattggctgtgaccgatgtcagaactggtaccacgggcgctgcgtgggcatc
ctgcagagcgaggcagatctcatagatgagtacgtgtgtccccagtgccagtccacagag
gatgccatgactgtgctcagtcctctcacagataaagactatgaagggttgaggagggtc
ctgcgctccttgcaggctcacaagatggcatggccgttcctagaaccagtagatcccaac
gatgccccagattattatggtgtcatcaaagaaccaatggaccttgctaccatggaggaa
agaatcctgaaacgctactacaaaaaggtcacggagtttgtggcagacatgaccaaaatt
tttgataactgccgttactacaatccaagtgactcccctttttaccagtgtgcagaagtt
ctcgagtctttctttgtacagaaactaaaaggatttaaggcaagcaggtcccataacaac
aaactgcagtctacagcttcttag
DBGET
integrated database retrieval system
