Taeniopygia guttata (zebra finch): 100227455
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Entry
100227455 CDS
T01082
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X21
KO
K14946
RNA binding protein fox-1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100227455 (RBFOX1)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100227455 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100227455
NCBI-ProteinID:
XP_012432688
Ensembl:
ENSTGUG00000004562
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All DBs
Position
14:complement(12086929..13232623)
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AA seq
436 aa
AA seq
DB search
MQAPSLVLRRLQSNTMQHPLTGATCVALPNVGMCPQLSCALTFMYLQQGNQEATAPPDTM
AQPYASAQFAPPQNGIPAEYTAPHPHPAPDYTGQSTVPEHTLNMYPPAQTHSEQSAADTN
AQTVSGTATQTDDAAQTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFG
KILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKT
VNPYTNGWKLNPVVGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAA
TAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQP
ATATAAAYSDSYGRVYAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSS
LQASIYRGGYSRFAPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccccctcacttgttctacgtagacttcagagcaacaccatgcagcatcccctt
acgggtgcaacctgcgtggcactgccgaatgtgggcatgtgtccccagctctcctgtgcc
ttgacttttatgtacttacagcagggtaatcaggaagctacagcacctcctgacacaatg
gcacagccttatgcctcagcccagttcgctccacctcagaacggtatccctgcagaatac
acagccccacatccgcatccagctccagactacacaggccaaagcactgttccagagcac
acgttaaacatgtaccctcctgctcagacacactccgaacagagtgcagctgacacaaat
gcacaaactgtctccggcacagccacacagacagatgatgcagcacagaccgatggccag
caacagacacaatcttctgaaaacacagaaaacaaatcacagccaaaacggctccacgtc
tcaaatataccattccgattccgggatccagatcttagacaaatgtttggtcaatttggt
aaaatcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttcgta
actttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtggta
gagggccgtaaaatcgaggtaaataatgccacagcacgtgtaatgacaaataaaaagacc
gtcaacccttacacgaatggctggaaattaaatccagttgttggtgcagtttatagtcca
gagttctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtgtac
agtgcccccagttcactagtatacacatccacaatgccaggatttccctaccctgctgcg
accgcagccgccgcgtacagaggtgcccacctacgaggccgaggtcgcacggtgtacaac
acgttccgagcagcggctccccctcctcccatcccagcctacggcggtgttgtataccag
gatggattttatggtgcagacatttatggtggttatgctgcctaccggtatgcccagcct
gccactgccactgcagctgcctacagtgacagttacggacgagtttatgctgcagacccc
taccaccacacacttgctccagcagccacctacggcgttggtgccgtgaatgcttttgca
cccttgactgatgccaagactaggagccatgctgatgatgtcggtctcgttctttcttca
ttacaggctagtatataccgagggggatacagccgttttgctccatactaa
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