Taeniopygia guttata (zebra finch): 100228125 Help Entry 100228125         CDS       T01082                                  Symbol PMS1 Name (RefSeq) PMS1 protein homolog 1   KO K10864   DNA mismatch repair protein PMS1 Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tgu03400]     100228125 (PMS1) DNA repair and recombination proteins [BR:tgu03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     MutL homologs      100228125 (PMS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_mis_repair HMG_box HATPase_c_3 HMG_box_2 HATPase_c HMG_box_5 CHDNT Motif Other DBs NCBI-GeneID:  100228125 NCBI-ProteinID:  XP_030133709 Ensembl:  ENSTGUG00000010865 LinkDB All DBs Position 7:complement(25188046..25232236) Genome browser AA seq 933 aa AA seqDB search MKQLPGETIRLLSSSQVITSVVSVVKELIENSLDASATGIDIKLENYGFSKIEVRDNGSG IKVDDVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICSISEVLVTTKTAADDFSIQ YALDSNGHVTSKKPSHLGQGTTVTVLNLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYG IIKPDLRITLTHNKAVIWQKTRVSDHKMACMSILGTAVMSSMVPFQHCCEYPEINLSGFL PKAESDTSLTSLSSSERSFIFINNRPVLQKEILKLIRQYYSQVTQKECTRSYPVFFLSIT VPASAVDVNITPDKTQVLLHYKESVLLAVENVLKSLYGPLPAAVPGESNKTDVTSEDMFV HRTDQTDVAVNEMGPSGNDELHAHTSFLSLSSDVQNCQAGKNTEICLNHQTFSGDNVHSC LDKREVSKSDAFPDSSSNLLREEEQNGQNMADIQGNSVPVDPESKKASEHLLSSENIDKL DKNEEILVPKDLPEISADSWSMGSAFKDILGDKLEPVKILIPEVGGTANKQNEYTGEKSS DPQSSNQSIKKKNVISEKFGHVTAYDLINSKIIKKPKSAFEFFTHECRPKLIDDNPKTSM NDILLTIEEQWKNLNEEEKQNYEIKATKDQERYNREVKKANAQPMHRPAKEAEKHKPKLK SSASDQQKLDKIFHNQIEKKGKLEQPVKIVTVPFALSSCRRHLQRPERNVSDEHKLFLIR RQSFPDVWILATEKNVKLLNPYRLEEALLCKRLLVNHKLPVEKLDTPIVLTDSLIGGAQY MAALYEMQKNYHSFHGSGYLSDPRLVANGFQIKVIEGVSATESHLEIEGMANCLPYYGIS DLKEILNAVVNRNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQL GKENKGCVHGRPFFHHLTDIPEVDKHNSMEIIQ NT seq 2802 nt NT seq  +upstreamnt  +downstreamnt atgaaacagctgcctggagagacaattcggctcctttcaagttctcaggtgattacttca gttgtcagtgtggtaaaggagctgatagaaaattccttggatgccagtgctacaggcatt gatattaaactggagaattatgggtttagcaaaatcgaagtaagagacaatggcagtgga attaaggttgatgatgttccagttatggcaattaaacactacacctcaaaaatcagctct tctgaggaccttgaaaggctgacaacatatggtttccgtggggaagctttgggatcgatt tgcagcatatcagaagttttggtcacaacaaagacagctgctgatgatttcagcattcag tatgctttggatagcaatggacatgtaacctctaaaaagccttcccatcttgggcaaggt actacagtaacagtcctaaatttgtttaagaatcttcctgtaagaaagcagttttactca acaaacagaaaatgtaaggaagaactgaaaaaagtccaagatctactgacagcatatggt atcataaaaccagacctgaggataacattaacacataataaggctgttatttggcagaag accagggtatcagatcacaaaatggcctgtatgtcaattctgggaacagccgttatgagc agtatggtaccttttcaacactgctgcgaatatcctgagataaatctttctggatttctc ccaaaagctgagtcagacacttctttgacaagcctttcaagttcagaaaggagtttcatt tttataaacaatcgtccagttcttcagaaggaaatactgaagttaattcgacaatactac agtcaggtgacacaaaaggaatgtactcgttcatatcctgttttctttttgagtattact gtacctgcctctgctgtggatgtgaatataacacctgataaaacacaagttttgctgcat tataaggaatctgtcttacttgcagttgaaaatgtgttgaaatcactgtatgggccacta cctgctgcagtccctggtgaaagtaataaaacagatgttacctcagaagacatgtttgtc catagaacagaccaaacagatgtggctgttaatgaaatgggaccatctggaaatgatgag ctacatgctcatacttcattcctttcactcagcagtgatgtgcaaaactgtcaagcagga aaaaacacagagatctgcttaaatcatcagacatttagtggtgataatgtacacagttgc ttggacaaaagagaggtttctaagagtgatgcctttccagacagttcctcaaatttattg cgtgaggaggaacagaatggacagaatatggctgatattcaaggtaacagtgttcctgtg gatcctgagtctaaaaaagccagtgagcaccttttgagttctgaaaatattgacaaatta gataaaaatgaggaaatcttagtccctaaggacttacctgaaatctctgctgatagttgg agtatgggaagtgcatttaaagacattctgggagacaagctggaacctgttaagatcttg attcctgaagttggagggacagctaataagcaaaatgaatacactggtgaaaaaagcagt gatccacaaagctcaaatcaaagcataaagaaaaaaaatgtgataagtgaaaaatttgga catgtgacagcttatgacttaattaatagcaaaataataaagaaaccaaagtctgcattt gaatttttcacacatgagtgtcgtccaaaattgatagatgataatccaaagaccagcatg aatgacatcttgctgacaattgaagagcagtggaagaatttgaatgaagaggaaaaacag aattacgaaataaaagccactaaggaccaggaacggtacaacagagaggtcaagaaagcc aatgcacagccaatgcaccgaccagcaaaggaggcagaaaaacacaaacccaagttaaag agttctgcatctgaccagcagaagcttgacaagatatttcataaccagattgaaaagaag gggaaactggaacagcctgtgaaaattgtgacagtgccttttgctctgagttcctgtaga cgtcaccttcagagaccagaaagaaatgtttcagatgaacacaagcttttcctgatccgt cgtcagagttttcctgatgtctggatacttgctactgaaaaaaatgttaagttgctgaat ccatatagattggaagaggccctgctatgtaagagattattggtgaaccataagcttcct gtagagaaactggacactccaattgtgttaacagacagtcttattggtggagctcagtat atggctgctctctatgaaatgcagaagaattaccacagtttccacggatcaggttatttg tcagatccaaggcttgtagctaatggattccagataaaagtgatagaaggtgtttcggct acagaaagtcatctggaaatagaagggatggcaaattgtctgccatattatggaatctct gatttgaaagaaattctgaatgcagtagttaacagaaatgcaaaggaagtatatgaatgt aggcctctcaaagtgataaattacttggagggagaagcagtacgtttagcgcggcagctg cccttacatttgtcaaaagaagatgtgcaaaacacaatttacaggatgaagcaacagctt ggaaaggaaaataaaggctgtgttcatggtcgtcctttttttcatcacttaacagatatt ccagaagttgacaagcacaactccatggaaattattcagtaa

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