Taeniopygia guttata (zebra finch): 100230328
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Entry
100230328 CDS
T01082
Name
(RefSeq) keratin, type II cytoskeletal 5-like isoform X1
KO
K07605
type II keratin, basic
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100230328
04147 Exosome [BR:
tgu04147
]
100230328
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100230328
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100230328
Exosomal proteins of other body fluids (saliva and urine)
100230328
Exosomal proteins of colorectal cancer cells
100230328
Exosomal proteins of bladder cancer cells
100230328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
ATG16
TPR_MLP1_2
CENP-F_leu_zip
COG6_N
Baculo_PEP_C
COG5_N
Motif
Other DBs
NCBI-GeneID:
100230328
NCBI-ProteinID:
XP_030115537
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MNRTLSMRAGGGGRSYSAASAIIPSSNRAGFSSVSVARSGGGGGGFGRLIGGGGGSSSGG
GGGFGSRSLYNLGGSKRISIGVGSSFRAAFGSGAAGGSGLGGGGGVGGWGLGSGGAGGGL
GLGLGAGGGGFGFGGGAGGLGYGGGYGGSGGFGPGGLGGLGGFPVGLVGTIQEVTVNQSL
LAPLNLEIDPNIQQVRKDEKEQIKTLNNKFASFIDKVRFLEQQNKVLETKWTLLQEQGQK
NNSGKSNLDPLFEAYINNLRRQLANLLNERGRMDGELKNMQDLVEDFKNKYEEEINRRTA
AENEFVVLKKDVDAAYMNKVELEAKVDALSDELNFLRALYEAELAQLSAQVSDTAVILSM
DNNRDLDLSSIIAEVKAQYEDIANRSRAEAEAWYQTKFEELQATAGKHGDDLRNTKGEIS
ELNRLIQRIRSEIENTRNQCATLQTAIGDSEERGELALKDAKAKMIDLEDALQKAKADMA
RQLREYQELMNVKLALDIEIATYRKLLEGEESRLSGEGLNPISYSVISSGSSIAGGAGLG
GGFGGLSLSGGGGGSGFGLGGGIGNGFGLGGGGGSSFGLGAGGGGGGNYSFGSTGGLGLG
AGGGLGGGFGGGSGLGTAGSYSHAGGGSSTLSTSGGNFSSGSAKGTNPGVKIVSKTSSSK
KSIKSQSLKSATEPE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggacactcagcatgagggcaggaggtggaggccgatcctacagcgctgcctcg
gccataattccaagcagcaacagggctggctttagctctgtgtctgtggcacgatcagga
ggaggaggaggtggctttgggaggctcattggaggaggtggtggcagcagttctggcggt
ggtggaggttttggcagcaggagcctctacaaccttggtggtagcaagaggatttccatc
ggggttggaagcagcttccgagctgcttttggaagtggagctgctggtggctctggcctg
ggaggtggtggcggagtgggtggctgggggcttggcagtggtggagctggtggtgggctt
gggctggggcttggtgctggaggtggtggatttggctttggtggaggtgctggtgggctt
ggctatggtggtggctatggaggcagtggagggtttggccctggtggactgggagggctg
ggaggattccctgtggggctggtgggtacaatccaagaagtgaccgtaaaccagagtctt
ctggcaccgctgaacctggagatagatccaaacatccagcaggtgcggaaagatgagaag
gagcaaatcaagaccctcaacaacaaatttgcttctttcattgacaaggttcgcttcctg
gagcagcagaacaaggtgctggagaccaaatggacccttctgcaggagcagggccaaaaa
aacaattctggcaagagcaacctggatccgctgtttgaggcctacatcaacaacctgcgg
cgacagttggccaacctgctcaatgagcggggacgcatggatggggagctgaagaacatg
caggaccttgtggaggacttcaaaaacaaatatgaagaggaaatcaaccggcgcacagcg
gcagagaacgaatttgtggtgctcaagaaggacgtggatgctgcttacatgaacaaggtg
gagctggaggccaaggtggacgccctgagtgatgaactcaacttcctccgagccctctat
gaggcggagctggcccagctcagcgcccaagtgtccgacaccgccgtcatcctgtccatg
gacaacaaccgggacctggacctgagcagcatcattgccgaagtcaaagctcagtatgag
gacatcgccaaccggagccgtgccgaggccgaggcttggtaccaaaccaagtttgaggag
ctgcaggccacggctgggaagcacggtgatgacctgcgcaacacgaagggtgaaatctca
gagctcaaccggctcatccagaggatccgttctgagatagagaacacgaggaaccagtgt
gccaccctgcagacggccatcggagactctgaggagcgcggggagttggccctcaaggat
gccaaggcaaagatgattgacctggaagacgccctacagaaagccaaggctgacatggcc
cggcagctccgggaataccaggagctcatgaacgtcaagctggccctggacatcgagatt
gcgacctacaggaagctgctggagggcgaggagagcagactcagtggggagggactgaac
cccatcagctactcagtcatcagctctggctccagcattgctggtggagctggtttagga
ggaggatttggtggactgagcctgagtggaggaggcggcggaagtggttttggccttgga
ggaggtattggaaatggttttggccttggaggaggcggtgggagcagtttcggtcttgga
gctggcggtggaggaggaggaaactacagttttggaagcacaggaggacttggactcggg
gctggaggtggtcttggaggtggatttggaggagggagtggtctgggcactgctggcagc
tacagccatgccggaggcggcagcagcaccctgagcaccagcggagggaatttcagctct
ggaagtgcaaaaggcaccaacccaggtgtgaaaattgtctccaaaacctcctccagcaaa
aagagcataaaaagccaaagcctgaagagtgccacagagcccgagtaa
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integrated database retrieval system
