Taeniopygia guttata (zebra finch): 100230547
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Entry
100230547 CDS
T01082
Symbol
ABCD4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu02010
ABC transporters
tgu04146
Peroxisome
tgu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100230547 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100230547 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
100230547 (ABCD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100230547 (ABCD4)
Enzymes [BR:
tgu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
100230547 (ABCD4)
Transporters [BR:
tgu02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
100230547 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_7
AAA_16
SbmA_BacA
AAA_22
CoV_E
nSTAND1
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
100230547
NCBI-ProteinID:
XP_030128997
Ensembl:
ENSTGUG00000012116
LinkDB
All DBs
Position
5:complement(38828450..38847734)
Genome browser
AA seq
620 aa
AA seq
DB search
MAGGSGSARGAGAGGRAGSRLDGLFLRRFLRLLAVLFPGWPSPSALMFLTLLGVALLEQL
VIYQVGVIPSQYYEVLGKKDFSGFKTLTAVAVTLIIVNSTLKSFDQFICNMMYVNWRKSL
TEYLHSCYFQGQVYYNLLVLREDIDNPDQRISQDVERFCRQLSSMVSKLVISPFTLAYYT
YQCFHSTGWLGPVSIFGYFVIGTMINKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTNRRLQSLLKTQRELIGKELWLSIGINTFDYLGSILSYVVIAIPIFS
GVYGDLSPTELSSLVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLG
RKKNGNYSEAKTSWDLDGSHSGEDPVPSDTAFLLERVTLSVPSSDKLLIKDLSLRISQGN
SVMIVGNTGTGKTSFLRVLGGLWESTRGSIRMLTCFGPRGVVFLPQRPFFTDGSLREQVI
YPLKEIYPLSGSADDERIVRFLELAGLTDLLARTGGLDEQVDWNWYDILSPGEMQRLSFA
RLFYLQPKYAVLDEATSALTEEVEHELYRMCLQLGMTLISVGHRPSLEKFHSWILKLHGE
GRWELTRCEKMKRLPSEEGH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcagcggcagcgcgaggggtgccggggccggcgggcgggctggttcccgg
ctggacgggctgttcctgcggcggttcctgcggctcctggccgtgctctttcctgggtgg
ccctccccgagcgccctcatgttcctgacgctgctcggtgtcgccttgctggagcagctg
gttatttaccaggtcggcgtcatccccagccagtactatgaggtcctagggaagaaggac
ttctctggattcaaaacactgactgccgttgctgtgactctgatcattgtgaactccacg
ctaaaaagtttcgaccagtttatctgcaacatgatgtatgtgaactggaggaaatctctc
actgaatacctccacagctgctacttccaaggccaggtctactacaacctgcttgtgctg
cgtgaggacatcgataacccggaccagcgcatcagccaggatgtggagaggttctgcagg
cagctcagctccatggtcagcaagctagtcatctcacccttcacactggcctactacaca
taccagtgctttcacagcacaggttggctaggcccagtgagcatctttgggtattttgtc
attgggacgatgattaacaaagtgttgatgagcccaattgtgtctaaacttgtgcagcag
gaaaaactggagggagatttcaggttcaagcacatgcagattcgtgtcaatgcagaacca
gctgctttctacagggctgggcgagtggagcacatgcgcacaaaccggaggctgcagagc
ctgctgaagacccagagagagctgataggcaaggagctatggctatccattgggatcaac
acctttgattatttgggcagcatcctgagctacgtggtcattgccattcccatcttttct
ggtgtctatggcgacctgagtccaacagagctcagttcccttgtcagcaagaatgccttt
gtttccatctacctcattggctgcttcagccagctcatagatctttccagcactgtgact
gatgtagctggctacacacacaggattggcgaactgcaggagaccttgctgagccttggc
agaaaaaaaaatggtaactactcagaagccaaaaccagttgggatttggacggcagccat
tctggcgaggacccagtgccaagcgacactgcttttcttctggagcgagtgacactctca
gtaccatcctctgacaagctgctcatcaaggacttgagcctcaggatatcacaaggaaac
agtgtgatgattgtgggaaacactggtacagggaagacatctttccttagggtcctcgga
ggactctgggagagcacacgagggagcatcaggatgctgacctgctttggcccccgagga
gtggtgttcctaccgcagaggcccttcttcactgatggaagcctgcgtgagcaggtgatc
tatcccctgaaggagatctatccactttcagggtctgcagatgatgagaggattgtgaga
tttctggagctggctgggctgacggatttgctggcaaggactggaggactggatgaacag
gtggactggaactggtatgacatcctgtccccaggggagatgcagagactctcatttgca
cggctcttctacctccagccaaaatatgcagtgttagatgaagccaccagcgccttgaca
gaagaggtggagcatgagctgtaccgtatgtgccttcagctgggcatgacactgatcagt
gtgggacacagacccagcctggaaaagttccacagttggattttgaaacttcatggggag
ggaagatgggagctcactcgatgtgagaagatgaagcggctcccctctgaggaaggacac
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