Taeniopygia guttata (zebra finch): 100230967
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Entry
100230967 CDS
T01082
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100230967 (PRDM8)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100230967 (PRDM8)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100230967 (PRDM8)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100230967 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_2
DUF5810
zf-C2H2_6
zf-Di19
Motif
Other DBs
NCBI-GeneID:
100230967
NCBI-ProteinID:
XP_030128114
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Position
4:complement(67956013..67960007)
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AA seq
613 aa
AA seq
DB search
MEDAGVQRGIWDGDAKTVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSAREREEQNLEAYIKSGQLFYRSLRRI
AKDEELLVWYGKELTELLLLGPARAPARTNGSPPFACPECSQRFQFELPFAAHLRFRCPK
RLHGPDIGPAAEAAAAAKDGAGKEQEPGKFGKPGGPPHHPFPGPDGGPAASTKPSTDFHN
LARELENSRGGRAGSPGRPAPPEGGPEAAAGKAKRRFPEEEERGPGAARGRFPAERPGLP
AAPKEEPGCAPQQQYRAAGSYCGLEEGGRLFAPPSPETGEAKRSAFVEVKKAARGPEPDG
GPEEGPERGSPGAGGAEPGLCPRGGAGGPLTARLDGGSPARGSAFSTVPQLGAGPGGPGG
GGGGADERKSAFSQPARSFPHVPPLVLGPKLGGLGEPCPDGAAAPARLYAAEALAAKLPG
GGEAAGGGGGGGGGLPKQSPFLYTTAFWPKSSAAAAVAAAAAGPLQLQLPSALTLLPPSF
TSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYALEPLVKRRREEKLKCPICNESFR
ERHHLSRHMTSHN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccggcgtccagcggggaatatgggacggggatgccaagacggtccagcag
tgcttgactgacatttttaccagcgtttacaccacctgcgacatcccggaaaatgccatt
ttcggcccctgcgtcctgagccacacgtccctgtatgacagcatcgcctttatcgccctc
aagtccaccgacaagcgcaccgtcccctacatattccgggtggacacgtcggcggcgaac
ggctcgtcggaggggctgatgtggctgcggctggtgcagtcggcgagggagcgggaggag
cagaacctggaggcctacatcaagagcgggcagctcttttatcgctccctacgccgcatc
gccaaggacgaggagctgctggtgtggtacgggaaggagctcaccgagctgctgctgctc
ggcccggcccgggcccccgcccgcaccaacggctcgccgcccttcgcctgcccggagtgc
agccagcgcttccaattcgagctgcccttcgccgcacacctccggttccgctgcccgaag
aggctgcacggccccgacatcggtcctgccgccgaggcggccgccgccgctaaggacggc
gccggcaaggagcaggagcccggcaagttcgggaagcccggcgggccgccgcaccacccc
ttccccgggcccgacggcggccccgccgccagcaccaagccctccacggacttccacaac
ctggcgcgggagctggagaactcccgcggcgggcgcgccggctccccgggccggccggcg
ccccccgagggtggccctgaggcggcggccgggaaggcgaagcggcgcttccccgaggaa
gaagagcgcgggcccggcgcggcgcggggccgcttcccggcggagcggccggggctgccg
gcggcgcccaaggaggagccgggctgcgccccgcagcagcagtaccgcgccgccggctcc
tactgcgggctggaggagggcggacgcctcttcgcaccgcccagcccggagaccggcgag
gccaagcgcagcgccttcgtggaggtgaagaaggcggcccgcggccccgagcccgacggc
ggccccgaggagggcccggagcgcggctccccgggcgcgggcggcgcggagccggggctg
tgcccccgcggcggcgcggggggcccgctgaccgcccgcctggacggcggcagcccggcg
cgggggagcgccttcagcacggtgccgcagctcggggccggccccgggggacccggcggc
ggcggcggcggggccgacgagagaaaaagcgccttctcgcagcccgcccgctccttcccg
cacgtcccgccgctggtgctggggcccaagctgggcgggctgggcgagccctgccccgac
ggtgccgccgcccccgcccgcctgtacgccgccgaagcgctggccgccaagctgccgggc
ggcggggaggcggcgggcggcggcggcggcggcggcggggggctgcccaagcaaagcccc
ttcctctacaccacggccttctggcccaagagctcggcggcggcggcggtggcggcggcg
gcggcggggccgctgcagctgcagctgccgtcggcgctgacgctgctgccgccgtcgttc
acctcgctgtgcctgccggctcagaactggtgcgccaagtgcaacgcgtccttccgcatg
acctcggacctggtctaccacatgagatcccaccacaagaaggaatacgcgctggagccg
ctcgtcaagcgccgccgagaggagaagctcaagtgtcccatctgcaacgagtccttccgc
gagcgccaccacctctcccgccacatgacctcccacaactag
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