Taeniopygia guttata (zebra finch): 101232847
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Entry
101232847 CDS
T01082
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
101232847 (DDX55)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101232847 (DDX55)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
Pre-60S particles
Helicases
101232847 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
101232847
NCBI-ProteinID:
XP_004176464
Ensembl:
ENSTGUG00000005302
LinkDB
All DBs
Position
15:11568648..11576269
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AA seq
596 aa
AA seq
DB search
MAAAAEGEWGALPVPLSPGVLRALRQLRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILFIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMVCRADEKFNQLVHFLRQHKQEKHLVFFSTCASVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAMFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEEQRREREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNHRFKAETTEDAESEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctgagggcgagtggggcgcgctgccggtgccgctcagcccgggcgtg
ctgcgggcgctgcggcagctccgcttccaccaaatgacgccggtgcagtctgcgaccatc
ccgctcttcatgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaacc
ttggcatttgtgattcccatactggaaattcttctcagacgggaggaaaagttaaagaaa
atgcaggttggggctataattatcacaccaacgagggaattggccattcagattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttttcattggtgga
aggaaccccatggaagatgttgagaagttcaaggagcatggtggcaacatcatcgtggcc
accccgggccgcctggaggatctgttcaggaggaaagctgacgggctggaccttgccagc
tgtgtgaaggctctggatgtgctggtgttggatgaagcagacagacttctagatatgggc
tttgaagcaagcttgaatgccattctggactttttgcccaagcagaggaggacaggtctg
ttctcagctacccagacccaggaggtggagaacctggtgagggcagggctgcggaacccc
gtccgcatctcggtcaaggagaagggagtggcagccagcaacacccagaaaaccccaact
cgcctggagaactactacatggtctgcagagcagatgaaaaatttaaccagttggtgcat
tttcttcggcagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcctctgtg
gaatactatgggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccat
gggaaaatgaagcacaagcgtaacaagattttcacagagttccggaagctcccagggggc
attttggtgtgcacagatgtgatggcccgtggcattgacattccagaagtgcactgggtg
ttgcagtatgacccacccagcagtgccagtgccttcgtgcatcgctgtggtcgcacggcg
cggatcggcaacgtgggcagtgctctggtgtttctgcttcccatggaagaatcctacatt
aacttcctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccgcagacaaacgtg
ttggatcttcttcccaagctgaagtccatggctctggctgacagggcaatgtttgagaaa
gggatgaaagcctttgtgtcttatgtccaggcttatgccaaacacgaatgtaatctgatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaattaagaggaaaatgttttccagactttactccagtcactgtcaat
acagactccatttcatttaaggataaaaacagagaaaagcagagacaaaagaaattagaa
gaacaaagaagagaaagagaggaaaatcaagggaaaaagaaatttgtaaagaacaaagca
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaagcgt
gaagagggctctgatattgaagatgaggatatggaagagttgctgaatgacacaagactc
ttaaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggc
aaccacaggttcaaagcagaaactactgaggatgcagaatctgaaggttga
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