Taeniopygia guttata (zebra finch): 101233673
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Entry
101233673 CDS
T01082
Symbol
RNF8
Name
(RefSeq) E3 ubiquitin-protein ligase RNF8
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
101233673 (RNF8)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
101233673 (RNF8)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101233673 (RNF8)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101233673 (RNF8)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
101233673 (RNF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Yop-YscD_cpl
zf-rbx1
Prok-RING_4
zf-ANAPC11
zf-RING_6
zf-RING_10
R-HINP1I
AAA_23
Motif
Other DBs
NCBI-GeneID:
101233673
NCBI-ProteinID:
XP_032603406
LinkDB
All DBs
Position
3:81466214..81476164
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AA seq
604 aa
AA seq
DB search
MAAPGRPEGAVRGGGGTDTTERGGTAGKRRAVVPAVLRRTRKLRSQLGLGRAPARPGPSR
PCERRPAPPQRALPPVRRAGAMAVRGVPCLAWCLRRVGASGDWLLLEAGTQVSRTGLRPL
RVGGRAGTALGAQFGGVSWFLTALPRRKKHRLVPLKEQSPFVAVRRGRPGGRHSAPVTVG
RGLDITYQLVSKTCPLMISRKHCVFQQNAEGQWTVKDNKSLNGVWLNKQRLDPSKVYPIA
EGDRIELGVPLENRETAEYEYEVIKDEWEKIRPFLAQRSDLGKAKCSRPKRKFSLEELET
CESESLSNSKCKRDRMSCGNEPFDKSWVQAEEARRLTEKMDVKLPAPGPSEGYSDPVHGS
PVHSKKAVAVPKKDQKGSGHVESWTGLKKLKKSLEDTMKLKVKLQEKQTAVLNVKQKCRK
SDQKEMLVMEQELQELQNQLCMEQEHQQQQVEELERTLCKEQQKLEHHALMEELNRNKRD
FEEIIQAKNKELEETKEEKEKVRAQKEEVLNQMNDVLENELQCTICSEHFIEAVTLNCAH
SFCSYCINEWTKRKVECPICRQEIKSKTRSLVLDNCINRMVEKLDVEMKEHRLSLIRGRK
EMSA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccggggcgcccggaaggggcggtacgaggaggaggcgggacagacacgacg
gagcgcggcgggactgcgggaaagcgccgcgcggtcgtccccgcggtcctacggcgcacg
cgcaagctccggtcgcagcttgggctcggacgggccccggcccggcccggcccgtcccgg
ccctgcgagcgccgccccgccccgccgcagagagcgctcccgccggtccggcgggcgggc
gccatggcggtgcgcggcgtgccgtgcctggcctggtgcctccgccgagtcggggccagc
ggcgactggctcctgctggaggccggcacgcaggtgagccgcaccgggctccgacccctc
cgagtgggcgggagggcgggcacggctctcggggcgcagtttggtggggtctcgtggttt
cttacagcgcttcccaggaggaaaaagcaccgccttgtcccgcttaaggagcagtctccg
ttcgtggccgttcggaggggccgcccgggcgggcgccattccgccccggtgactgttggc
cgaggattagatatcacgtaccagctggtgtcaaaaacctgtcccttgatgatctctcgt
aagcactgtgtcttccagcagaatgcagaagggcagtggactgtcaaggataacaagagt
ctaaatggagtttggcttaataaacagcgcctggatccatcaaaagtctatccgattgct
gaaggagaccgtattgagttgggagtgcctttggaaaacagagagactgctgaatatgag
tatgaagtaattaaagacgaatgggagaaaattagaccctttttagcccaaagaagtgac
ctggggaaagctaagtgttcaagacctaaacgtaaatttagtttggaggaattggagaca
tgtgaatcagagagcctctcaaactccaaatgcaaaagagacaggatgtcctgtggcaat
gaaccttttgataaatcatgggtacaggcagaagaggccagacggctaacagagaagatg
gatgtcaagctgcctgctcctgggcccagtgaggggtatagtgatccagtgcatggtagc
cctgttcactccaagaaagctgtggctgtccccaagaaggaccagaaaggctctggtcat
gtagagtcatggactggcttgaaaaagctgaagaaatctctggaagatacaatgaaatta
aaggtcaaattgcaggagaagcagactgcagttctgaatgtgaagcagaaatgcaggaag
tctgatcagaaggagatgctagtaatggagcaggagctgcaggagttgcagaaccagctc
tgcatggaacaagagcatcagcagcagcaggtggaagagctggagaggacattatgtaaa
gagcagcagaagctagagcatcatgctttgatggaagaactgaatcgtaataaaagagat
tttgaggagataattcaagccaagaataaagaactggaagaaaccaaggaggagaaggaa
aaggtgagagcccaaaaagaagaggtgttgaatcagatgaatgatgtgttggagaatgag
ttgcagtgcacaatctgttctgagcactttattgaggcagtcactctgaactgtgcacac
agcttctgctcctactgtatcaatgagtggacaaaacgtaaagtggagtgccctatctgc
aggcaggagatcaaatcaaagacacgctctctggtgctagataactgcataaacaggatg
gtagaaaaactagatgtggaaatgaaagagcatcgcctaagccttatcagagggcggaaa
gagatgagtgcatga
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