Taeniopygia guttata (zebra finch): 105759925
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Entry
105759925 CDS
T01082
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105759925 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
105759925 (HDAC5)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105759925 (HDAC5)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105759925 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
105759925
NCBI-ProteinID:
XP_030111837
LinkDB
All DBs
Position
27:697828..712232
Genome browser
AA seq
1062 aa
AA seq
DB search
MDPQSDAEGGSGREPPLELLPRVPLHAALPAPACPAGPEGPEEAGVDAGLAAAREQQLQR
ELVALKQQQQLQKQLLFAEFQKQHEHLTRQHQVQLQKHLKQQQEALAARRQQELEQQRQR
ERQELEQQQRLEQLQSLRPKDRGRDSAIASTEVKLKLQEFLLSKAKEPGPGAPNHSLPQH
PKCWAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRKTASEPNLKVRSRLKQ
KVAERRSSPLLRRRDGSVLSAFRKRHVEITVSSVCSSAPGSGPSSPNSSHGAHNGLAASV
PNIHSEQLLPQPHGLALDGAQLSLYTSPSLPNLSLGLQATVTVTSAHLPVSPKLSPQAEG
ERPGVPPGVSPLRPGAALPGKFLSTSSIPGCLLGVALDGDAPAGSPSLLQHVLLLEQARQ
QSTLIAVPLHGQSPLVTGGRGGGPRGNKLPRHRPLSRTQSSPLPQSPHGPLQHFLDKQQL
KLLPKGGELARQPPVHPEETEEELTAQQSPPPGERGPPGPPLGPPLALVSPEAGDPPEQP
QDPEGCQEPGDSGDEAPGDPDVTELGVTYKQVYPEAPLPLYPPPALGVLALPHAALARAQ
SSPASVKPPPPEGPPRHLFTTGVVYDTFMLKHQCTCGNTTIHPEHAGRIQSIWSRLQETG
LLGKCERIRGRKATLEEIQTVHSEHHALLYGTSPLNRQKLDSKKLLGPITPKTYAVLPCG
GIGVDSDTVWNELHSSSAVRTAVGCLLELAFKVAAGEVKNGFAVIRPPGHHAEESTAMGF
CFFNSVAISAKLLQQRLSVGRILIVDWDIHHGNGTQQAFYSDPHVLYISLHRYDDGNFFP
GSGAPEEVGSGLGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIANEFCPDLVLVSAG
FDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGHDLTAICDASEACVSAL
LGLELEPLDPALLQQKPNVNAVATLEKVIEIQSRHWGSVRRFATAVGRSLLEAQRGDTEE
AETVTAMALLSVGAERHGTGNGTGTEPPARPAEEPMEAEPTL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagagcgacgcagagggggggtccggccgtgagcccccgctggagctgctg
ccccgtgtccccctgcacgctgccctgcccgccccagcgtgtccggcgggcccggagggg
ccggaggaggcgggggtggacgcggggctggcggcggcgcgggagcagcagctgcagcgg
gagctggtggccctgaagcagcagcagcagctccagaagcagctgctcttcgccgagttc
cagaagcagcacgagcacctcacccgccagcaccaggtccagctccagaagcacctcaag
cagcagcaggaggccctggcagcccggcggcagcaggagctggagcagcagcggcagcgg
gagcggcaggagctggagcagcagcagcgcctggagcagctgcagagcctgcgccccaag
gaccggggccgtgacagcgccatcgccagcacggaggtgaagctgaagctccaggagttc
ctgctcagcaaggccaaggagccgggccccggcgcccccaaccattccctcccccagcac
cccaaatgttgggctcaccacacctcgttggaccagagttcccccccccagaccggcagc
ccggggacccccccgtcctacaagctccccctgctcggcacctacgacggccgggacgat
ttcccgctgcgcaaaaccgcctcggagcccaacctgaaggtgcgctcgcggctgaagcag
aaggtggcggagcgcaggagcagccccctgctgcggcggcgtgacggctccgtgctcagc
gccttccgcaagcggcacgtggagatcaccgtgtcgtcggtctgcagcagcgcccctggg
tcggggcccagctcccccaacagctcccacggtgcccacaacggcctggccgcctctgtc
cccaacatccacagcgagcagctcctgccccagccccacggcctggccctggacggggcc
cagctcagcctctacacgtccccgtcgctgcccaacctgtccctggggctgcaggccact
gtcactgtcaccagcgcccacctgcccgtgtcccccaagctgtcgccgcaggcggagggc
gagcggccgggggtgcccccgggggtgtccccgctgcgccccggggccgccctgcccggg
aagttcttgagcacgtcctcgatcccggggtgcctgctgggggtggccctggacggggac
gccccggctgggtccccgtccctgctgcagcacgtgctgctgctggagcaggcgcggcag
cagagcacgctgattgctgtgcccctgcacgggcagtccccgctggtgaccggggggcgc
ggggggggtccccgcgggaacaagctgccgcgccaccggcccctgagccgcacccagtcc
tccccgctgccccagagcccccacgggcccctgcagcacttcctggacaagcagcagctc
aagctgctccccaaagggggggagctggcgcggcagccccccgtgcaccccgaggagacg
gaggaggagctgacggcgcagcagtcgccccccccgggggagagaggcccccccgggccc
cccctcggcccccccctcgccctcgtgtcccccgaggccggggaccccccggagcagccg
caggaccccgagggctgccaggagccgggggacagcggggacgaggcccctggggacccc
gacgtcaccgagctgggggtcacctacaagcaggtgtaccccgaggcgccgctgccgctg
taccccccgcccgccctgggggtcctggccctgccccacgccgccctcgcccgcgcccag
tcgtcccccgccagcgtcaaaccccccccgcccgaggggcccccccggcacctcttcacc
acaggcgtggtgtacgacaccttcatgctgaagcaccagtgcacctgcggcaacaccacc
atccaccccgagcacgccggccgcatccagagcatctggtcccggctgcaggagacgggg
ctgctgggcaagtgcgagcgcatccggggcaggaaggcgacgctggaggagatccagacg
gtgcactcggagcaccacgcgctgctctacggcaccagccccctgaaccgccagaaactg
gacagcaaaaagctgctgggtcccatcactccgaagacgtacgcggtgctgccgtgcggg
ggcatcggggtggacagtgacacggtgtggaacgagctgcactcgtccagcgccgtgcgc
acggccgtgggctgcctgctcgagctggccttcaaggtggccgcgggcgaggtcaagaat
ggctttgccgtcatccgccccccaggccaccacgccgaggagtccacggccatgggcttc
tgcttcttcaactcggtggccatctcggccaagctgctgcagcagcggctcagcgtgggc
aggatcctcatcgtggactgggacatccaccacgggaacgggacccagcaggccttctac
agcgacccgcacgtgctctacatctccctgcaccgctacgacgacggcaacttcttcccg
ggcagcggggcccccgaggaggtgggcagcgggctgggcgtgggctacaacatcaacatc
gcctggacgggcggcgtggaccccccgatcggggacgtggagtacctgacggccttcagg
acggtggtgatgcccatcgccaacgagttctgcccggacctggtgctggtctccgccggc
ttcgacgccgtcgagggtcacctgtccccgctcgggggctactccgtcaccgccaagtgc
ttcgggcacctgaccaagcagctgatgatgctggcggggggccgggtggtgctggcgctg
gagggggggcacgacctgacggccatctgcgacgcctcggaggcgtgtgtcagcgccctg
ctggggctcgagctggagcccctggacccggccctgctgcagcagaagcccaacgtgaac
gcggtggccacgctggagaaggtcatcgagatccagagccggcactggggctcggtgcgg
cgcttcgccaccgccgtgggccggtccctgctggaggcgcagcgcggggacaccgaggag
gctgagacggtgacagccatggcactgctgtccgtgggcgccgagcgccacggcaccggt
aacggcaccgggacggagcccccggccaggccagcggaggagccgatggaggccgagccc
acgctctga
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integrated database retrieval system
