Taeniopygia guttata (zebra finch): 115491854
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Entry
115491854 CDS
T01082
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04136
Autophagy - other
tgu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115491854 (ATG4D)
04136 Autophagy - other
115491854 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
115491854 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
115491854 (ATG4D)
03029 Mitochondrial biogenesis [BR:
tgu03029
]
115491854 (ATG4D)
Peptidases and inhibitors [BR:
tgu01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
115491854 (ATG4D)
Membrane trafficking [BR:
tgu04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115491854 (ATG4D)
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115491854 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
115491854
NCBI-ProteinID:
XP_032601480
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSGGGEGPGPPPEPGPAPRPGPGPGPPPGAERSGQRVRGRVLAAWNSVKYGWTLRPRPHF
SPRDPLYLLGRVYTPGNGEELARFRRDFCSRLWLTYRSGFPALPGTPARSSDCGWGCTLR
SAQMLLGQGLLLHLLGRDWMWPEAPLEPEPRGSRRTRDPPGRTRDPRDGPRVSRDGHGSP
RVDTATPGRMRDTPGPTQDPPGLTQDPPGPTRDPPGQTQDPPGLTRPPQNGQGPPGMDTE
RSGRTRDPSGRARDPPGRVRDPPGRSQDPPGRSQDPSGRVRDPSGQPRDPPGQPRDPSGQ
PRDPPGRSQDPSGRVRDPPGKPRDPPGQPRDPSGQPRDPSGAPRAPRDAEQRHRAIVSWF
SDHPRAPFGIHRLVELGREFGRSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTV
YKEDVARLVRGDRDGRTAGHGAPGPGIPGLGTPGAPGPGTPGLGTPGAPGPGTPGIPGLG
SPGVPGPGTPGLGTPGAPGSGTPGAPGPGAPGPGTSGAPGPGTPGLGSPGAPGHGTPGLG
SPGAPGPGTPAAPEPGHRRGLVLLVPARLGGENLNPVYVECVKELLQLRSCLGIIGGKPR
HSLYFLGFQGDSLLYLDPHLCQPCVDTAREDFPLQSFHCCFPRKMSFGKMDPSCTFGFYT
AGTELEQLWGDLARALSPRSAPERYPIFTLAEGRARDHQTPDPPPGPPPPLPRRGKRPKK
PNSEEFVLL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggggggggagggaccgggaccccccccggaaccgggaccggcaccgagaccg
ggaccgggaccgggacccccccccggggccgagcggagcgggcagcgcgtgcggggccgc
gtgctcgcggcctggaacagcgtcaaatacggctggacgctgcggccgcggccccacttc
agcccgcgggaccccctgtacctgctggggagggtctacacaccggggaacggggaggag
ctggcgcggttccggcgggatttctgctcccggttgtggctgacgtaccggagcggtttc
ccggcgctgcccgggacccccgcccgcagcagcgactgcggctggggctgcaccctgcgc
agcgctcagatgctgctgggccaggggctgctgctgcacctgctgggccgcgactggatg
tggccggaggcgccgctggaaccggagccgagggggtcccgcaggacccgcgaccccccg
ggacggacacgggacccccgggatggaccgagggtctcccgggatggacacggatccccc
agggtggacactgcgacccccgggaggatgcgggacacaccgggaccgacccaggacccc
ccgggattgacccaggaccccccgggaccgacccgggaccccccaggacagacccaggac
cccccgggattgacgcgacccccccagaatggacagggacctcccgggatggacacggag
cgctccgggaggacacgggacccctcgggacgggcacgggaccccccgggacgggtccgg
gaccccccgggacggtctcaggaccccccgggacggtctcaggacccctcgggacgggtc
cgggacccctcgggacagccccgggaccccccgggacagccccgggacccctcgggacag
ccccgggaccccccgggacggtctcaggacccctcgggacgggtccgggaccccccggga
aagccccgggaccccccgggacagccccgggacccctcgggacagccccgggacccctcg
ggcgccccccgagccccccgggacgcggagcagcggcaccgcgccatcgtgtcctggttc
tcggaccacccccgcgccccgttcgggatccaccggctcgtggagctgggccgggagttc
ggccggagcgccggggactggttcggtcccgccatcgccgcccacctgctgcggggggcc
gtggagtcctgcaccgagacccccgggctcgccgtctacgtggcccaggactgcaccgtt
tacaaagaggacgtggccaggctggtgcggggcgaccgtgacgggcggacagcgggacac
ggagcgccgggaccgggaataccgggactgggaacaccgggagcaccgggaccgggaaca
ccgggactgggaacaccgggagcaccgggaccgggaacaccgggaataccgggactggga
tcaccgggagtaccgggaccgggaacaccgggactgggaacaccgggagcaccgggatcg
ggaacaccgggagcaccgggaccgggagcaccgggaccgggaacatcgggagccccggga
ccgggaacaccgggactgggatcaccgggagccccaggacacgggacaccgggattggga
tcaccgggagctccgggaccgggaacaccggcagcaccggagccggggcatcgccgcggg
ctcgtcctgctggtgccggcgcgcttggggggcgagaacctgaaccccgtgtacgtggag
tgcgtcaaggagctgctgcagctccgctcctgcctcggcatcatcggcggaaagccgcgg
cactcgctctacttcctcggcttccaaggtgattccctgctctacctggacccgcacctc
tgccagccctgcgtggacacggcgcgggaggatttccctctgcagtctttccactgctgc
ttcccacggaaaatgtccttcgggaagatggatcccagctgcaccttcggcttctacact
gccgggacggagctggagcagctctggggggacctggcccgggcgctgtccccccgctcg
gctccggagcgttaccccatcttcaccctggccgagggccgcgctcgggaccaccagacc
ccggaccccccccccgggccgccccctcccctcccccgccgggggaaacgccccaaaaaa
cccaactcggaggagttcgtgctcctctga
DBGET
integrated database retrieval system
