Taeniopygia guttata (zebra finch): 115496585
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Entry
115496585 CDS
T01082
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B isoform X1
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
115496585 (MEX3B)
04121 Ubiquitin system [BR:
tgu04121
]
115496585 (MEX3B)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115496585 (MEX3B)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115496585 (MEX3B)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115496585 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
zf-C3HC4
KH_2
KhpA-B_KH
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115496585
NCBI-ProteinID:
XP_030137133
LinkDB
All DBs
Position
10:11421329..11426181
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AA seq
558 aa
AA seq
DB search
MPSSLFADMERNGSGGGGGGGGGGGGGETLDDQRALQIALDQLSLLGLDNDETGSIYDNE
PRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPLFVVTGRKE
DVAMARREIISAAEHFSMIRASRNKNTALNGTVPGPPNLPGQTTIQVRVPYRVVGLVVGP
KGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGIIELTDE
NDFHANGTDVGFELNGTGSLWSKPTPPSITPTPGRKPFCNYRNDSSSSLGSASTDSYFGG
GTGGGGSARLADYSPPSPALSFSHNGNNNNNSANGYVYGGGGGDVLSSPDCCSELPFDSP
PGFDLAPAPPPGAALLWPQFERGPAAPPSPAPSPAAAAAFPGAAPANANLALLVSGPRRG
AAPPPARLSPPLHGSAAGTEHPLARRVRSDPGGRLLAASYPLYANGLGAHLPGLPSDSSA
SSSSSSSSSSSSSCSSSGVRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKTE
PQCPVCHSAVTQAIRIFS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctttttgcagacatggagaggaacgggagcggcggcggcggcggcggt
ggtggtggtggtggcgggggagagaccctggatgaccaaagagcccttcagatcgccctg
gatcagctctccctgctggggctggacaacgacgagacgggctccatttacgacaacgag
cctcggaaaaagagcgtgaacatgactgaatgcgtcccggtgcccagctcggaacatgtc
gctgagatagtggggagacaaggttgtaaaatcaaagctctgcgggcaaagaccaacacc
tacatcaagaccccggttcgcggggaggagccgctctttgttgtgacgggcagaaaggaa
gatgtggccatggcccgcagggagatcatctctgcggccgagcacttctccatgatccga
gcctcgcggaacaagaacacagccctgaacggcaccgttcccggccccccgaacctgccc
ggccaaaccaccatccaggtgcgggtgccttatcgcgtggtgggcttggtcgtggggccc
aagggggcgaccatcaagcgcatccagcagcagacgcacacgtacatcgtgaccccgagc
cgggacaaggagccggtctttgaggtgacaggcatgccagagaacgtggaccgggcccgg
gaggagatcgaggcacacatcgccatgcgcaccggcggcatcatcgagctgacggacgag
aacgacttccacgccaacggcacggacgtgggcttcgagctgaacggcacgggcagcctc
tggagcaagcccacgccgcccagcatcacacccaccccgggccgcaagcccttctgcaac
taccgcaacgacagctccagctcgctgggcagcgcctccaccgactcctacttcggcggc
ggcaccggggggggcggcagcgcccgcctggccgactacagccccccgagcccggcgctg
agcttctcgcacaacggcaacaacaacaacaacagcgccaacggctacgtgtacggaggg
ggcggcggcgacgtcctctcctccccggactgctgctccgagctgcccttcgactcgccg
cccggcttcgacctggcgcccgccccgccgcccggggccgccctcctctggccgcagttc
gagcgcggccccgccgcgccgccctcgcccgcgccctcgcccgccgccgccgccgccttc
ccgggcgccgcgcccgccaatgccaacctggcgctgctggtgagcggcccccggcgcggc
gccgccccgcccccggcgcggctctccccgcccctgcacggcagcgcggccggcaccgag
cacccgctggcgcggcgggtgcgcagcgaccccggcgggcggctgctggccgcctcctac
ccgctgtacgccaacgggctgggcgcccacctgcccgggctgccctccgactcctccgcc
tcctcctcctcctcctccagctcctcgtccagctcctcctgctcctcctctggcgtgcgg
cggaagggcagccgcgactgctcggtgtgcttcgagagcgaggtgatcgcggcgctggtg
ccctgcggccacaacctcttctgcatggagtgcgccaaccgcatctgcgagaagacggag
ccgcagtgccccgtgtgccacagcgccgtcacccaggccatccgcatcttctcctga
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