Taeniopygia guttata (zebra finch): 116809154
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Entry
116809154 CDS
T01082
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
116809154
Enzymes [BR:
tgu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
116809154
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116809154
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
Hydrolase
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
116809154
NCBI-ProteinID:
XP_032607791
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Position
19:complement(10102230..10198793)
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AA seq
715 aa
AA seq
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MDMWSYFYTCLVSVWLHRLYVYFAVAFGISLWIVIQFTTTRTKRKGEKSHRNPSSPEGTS
DKVGNGCAPRQAQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPE
DGLAEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGL
GNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDSNVAQSKHGSIEADFEAWKAKFLTR
LQALCRGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEQENTEAEELFETSSEEEAGG
TDSVVDVEDLGNIMGNMKKAKREQELQEGAAGAERREMITPALREALTKQGYKLIGSHSG
VKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRW
KMDQPELILQEALEKHQNMIRQFKGVSGVKAARLEEALAVKHCALSLVGEPIMYPHINSF
VRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFL
DSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLISLGKPDFIEVKGVTYCGESSASSLT
MANVPWHGEVVSFVRELARLLPDYGIACEHEHSNCLLLAHSKFQVDGEWRTWIDYGRFQE
LVREHQRSGGSRTFTAADYTARTPPWALFGARERGFDPLDVRFQRKNKARDISGC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtggagctacttctatacttgcctggtgtccgtatggctgcacagactttat
gtctattttgctgttgcttttgggatcagcctttggattgtcattcagttcaccaccacc
agaaccaaaaggaagggtgagaaatcccatagaaatccgtcttcccctgagggaacatca
gacaaagtgggaaatggatgtgccccccgtcaggcacaggaggtccatgttgctggagtg
aagatcttctatggttctcagactggcacagcaaagagatttgccaaagctctggctgaa
gctgttacttcccttaatttgcctgtggaagtcattaacatgggagactacgatccagaa
gatggtttagcagaggagacaagcagcaggaacatctgtgtgttcctggtggccacctac
accgaggggcagcccccggagagcgcagcctggttctgcaagtggctggaagaggcagcc
aatgatttccgtgttgggaaaagcttcctgcagggcctgagatacgccgtgttcgggctg
gggaactcggcctatgtggatcactacaacacagttggaaggaggatggacaggtggctt
tggatgctgagtgccagcaggatcatgactcgggctgagggggacagcaatgtggcccag
agcaagcatggcagcattgaggctgactttgaggcctggaaagccaaattcctgactcgg
ctccaggcactctgcagaggggaaaagaagccctgcagtgggaaatgcaagaaggggaag
tgcaaatcttcagggaagcagagcaaggaaagctcagaccatgaacatgggacatcggaa
caggagaacactgaggcagaggaattgtttgaaaccagtagtgaggaagaagctggaggc
acagattctgtagttgatgttgaagatcttggcaatatcatgggcaacatgaagaaagca
aagagagagcaggagctgcaggaaggagctgctggagctgagaggagagagatgatcacc
ccggccctgagggaggctctcactaaacaaggttataaactcattgggagccattctggg
gtgaagctctgccgttggacaaagtcgatgctgcggggccgcgggggctgctacaagcac
accttctatggcattgagagccaccgctgcatggaggccacccccagcctggcctgtgcc
aacaagtgtgtcttctgctggaggcaccacacgaaccccgtgggcaccgagtggcggtgg
aagatggaccagcctgagctgatcctgcaggaggccctcgagaagcaccagaacatgatc
aggcagttcaaaggcgtgtcaggagtgaaggcagctcggctggaggaagctctggcagtg
aagcactgtgccctgtccctggtgggggaacccatcatgtacccacacatcaacagcttc
gtgaggctgctgcaccagcatggcatctccaccttcctggtcaccaacgctcagttcccc
gaggagatcaggaggctggagcctgtgacccagctctacgtcagtgtggatgccagcacc
aaggagagcctgaggaggattgacagacccctcttcaaggacttctggcagaggtttcta
gacagcttaaaggccttagctgaaaagcaacaacgcactgtttataggctgaccctggtg
aaagcttggaatgtggatgaactcaaagcttatgctgacctgatatcccttgggaaacca
gacttcattgaggtcaagggtgtgacctactgcggggagagctctgccagcagcctgacc
atggccaacgtgccgtggcacggggaggtggtgagcttcgtgcgggagctggcgcggctg
ctcccggactacggcatcgcctgcgagcacgagcactccaactgcctgctgctggcccac
agcaagttccaggtggatggcgagtggaggacctggattgactacggccgtttccaggag
ctggtcagggagcaccagcgcagcggcggctccaggaccttcacagcggccgactacacg
gccaggactcctccctgggccctctttggggccagggaacggggctttgaccccctggat
gtgagattccagcggaagaacaaggcacgggacatctcggggtgctga
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