Thermococcus guaymasensis: X802_03390
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Entry
X802_03390 CDS
T04184
Name
(GenBank) RNA-binding protein
KO
K12589
exosome complex component RRP42
Organism
tgy
Thermococcus guaymasensis
Pathway
tgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X802_03390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgy03019
]
X802_03390
Messenger RNA biogenesis [BR:
tgy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
X802_03390
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
X802_03390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AJC71312
UniProt:
A0A0X1KJA6
LinkDB
All DBs
Position
complement(591170..591991)
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AA seq
273 aa
AA seq
DB search
MSDIEVMAGIMKDRILNLLKDGKRIDGRGFEDYRDIEVKTGFIEKAEGSAWVRIGGTRVL
VGIKVDVGEPFPDLPDRGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESQAV
ELEKLVIVPGKLVRVIFIDVHVLDHDGNLFDATGLGAMAALMTTKIPKIEYNEETGEIVK
LDEYEPLPVRHIPLPVTFAKIGSNIVVDPNLDEETVMDSRITITTDETGHISSVQKSEGG
SFKLEEVMYAVDTAMRKAEELRKILLEAVGSAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcgaggtcatggcaggtataatgaaggacaggatactcaacctcctcaag
gacgggaagaggatagacggcagaggttttgaggactacagggacatcgaggtaaagacc
ggcttcatcgagaaggcagagggctccgcctgggtgaggatcggtggtacgcgggttctc
gtgggcataaaagtggacgtgggagaaccgtttccggatcttccggacagaggcgtcatg
acgaccaacgttgagctcgttcccctggcatcaccgacatttgaacccggtccaccggat
gagagggcaatagagctggcccgcgttatagatagggggataagggagagccaggcagtt
gaacttgagaagctcgtcatcgtcccaggcaaactcgtgagggtcatcttcatagacgtc
cacgtcctcgaccacgatgggaacctcttcgacgccactggcctgggcgcgatggccgca
ctgatgacaacgaagataccgaagatcgaatacaacgaagagaccggcgagatagtgaaa
ctggacgagtacgagcccctccctgttagacacattcccctgcccgtgaccttcgcaaag
atcggttcgaacatcgtggtcgatccaaaccttgatgaggagactgtgatggacagcagg
ataacgataacgaccgacgagaccggccacatctcttcagttcagaagagcgagggtgga
agcttcaagcttgaggaggtcatgtatgccgttgacactgcaatgaggaaagctgaagag
ctcaggaagattctcctagaggccgtgggttcggcttcctga
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